RNA–Protein interactions for RNA: ENST00000590830.5

MBD3-208, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 1 (best)

Gene MBD3, Length 1,035 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-208ENST00000590830 RANBP17Q9H2T7 1088 aaKnown RBP26.23■■□□□ 1.79
MBD3-208ENST00000590830 HOMER2Q9NSB8 354 aa26.23■■□□□ 1.79
MBD3-208ENST00000590830 GOLGA8HP0CJ92 632 aa26.22■■□□□ 1.79
MBD3-208ENST00000590830 UBAC1Q9BSL1 405 aa26.22■■□□□ 1.79
MBD3-208ENST00000590830 KAT14Q9H8E8 782 aa26.22■■□□□ 1.79
MBD3-208ENST00000590830 OGDHLQ9ULD0 1010 aa26.22■■□□□ 1.79
MBD3-208ENST00000590830 DIS3Q9Y2L1 958 aaKnown RBP26.22■■□□□ 1.79
MBD3-208ENST00000590830 FARP2O94887 1054 aaPredicted RBP26.21■■□□□ 1.79
MBD3-208ENST00000590830 CENPBP07199 599 aaPredicted RBP26.21■■□□□ 1.79
MBD3-208ENST00000590830 CYBAP13498 195 aa26.21■■□□□ 1.79
MBD3-208ENST00000590830 TRDNQ13061 729 aa26.21■■□□□ 1.79
MBD3-208ENST00000590830 COL9A3Q14050 684 aaPredicted RBP26.21■■□□□ 1.79
MBD3-208ENST00000590830 CPVLQ9H3G5 476 aa26.21■■□□□ 1.79
MBD3-208ENST00000590830 ZNFX1Q9P2E3 1918 aaKnown RBP26.2■■□□□ 1.79
MBD3-208ENST00000590830 CAPN2P17655 700 aa26.2■■□□□ 1.78
MBD3-208ENST00000590830 NECTIN1Q15223 517 aa26.2■■□□□ 1.78
MBD3-208ENST00000590830 CHST3Q7LGC8 479 aa26.2■■□□□ 1.78
MBD3-208ENST00000590830 DIS3LQ8TF46 1054 aaKnown RBP26.2■■□□□ 1.78
MBD3-208ENST00000590830 DDX11Q96FC9 970 aa26.2■■□□□ 1.78
MBD3-208ENST00000590830 TRERF1Q96PN7 1200 aa26.2■■□□□ 1.78
MBD3-208ENST00000590830 UBA5Q9GZZ9 404 aa26.2■■□□□ 1.78
MBD3-208ENST00000590830 SENP2Q9HC62 589 aa26.2■■□□□ 1.78
MBD3-208ENST00000590830 ANO2Q9NQ90 1003 aa26.2■■□□□ 1.78
MBD3-208ENST00000590830 RNF146Q9NTX7 359 aa26.2■■□□□ 1.78
MBD3-208ENST00000590830 PPP4R2Q9NY27 417 aa26.2■■□□□ 1.78
MBD3-208ENST00000590830 FBXO40Q9UH90 709 aa26.2■■□□□ 1.78
MBD3-208ENST00000590830 PDE4DIPQ5VU43 2346 aa26.19■■□□□ 1.78
MBD3-208ENST00000590830 SLC27A2O14975 620 aa26.19■■□□□ 1.78
MBD3-208ENST00000590830 CDC45O75419 566 aa26.19■■□□□ 1.78
MBD3-208ENST00000590830 ICAM1P05362 532 aa26.19■■□□□ 1.78
MBD3-208ENST00000590830 ALAS1P13196 640 aa26.19■■□□□ 1.78
MBD3-208ENST00000590830 ANTXR2P58335 489 aa26.19■■□□□ 1.78
MBD3-208ENST00000590830 MUM1L1Q5H9M0 696 aa26.19■■□□□ 1.78
MBD3-208ENST00000590830 IFIT1BQ5T764 474 aaKnown RBP26.19■■□□□ 1.78
MBD3-208ENST00000590830 MB21D2Q8IYB1 491 aaPredicted RBP26.19■■□□□ 1.78
MBD3-208ENST00000590830 ANKRD35Q8N283 1001 aa26.19■■□□□ 1.78
MBD3-208ENST00000590830 NCOA7Q8NI08 942 aa26.19■■□□□ 1.78
MBD3-208ENST00000590830 FGD4Q96M96 766 aa26.19■■□□□ 1.78
MBD3-208ENST00000590830 TINF2Q9BSI4 451 aa26.19■■□□□ 1.78
MBD3-208ENST00000590830 CNGA1P29973 690 aa26.18■■□□□ 1.78
MBD3-208ENST00000590830 TKFCQ3LXA3 575 aa26.18■■□□□ 1.78
MBD3-208ENST00000590830 GPATCH4Q5T3I0 446 aaKnown RBP26.18■■□□□ 1.78
MBD3-208ENST00000590830 CREB3L3Q68CJ9 461 aa26.18■■□□□ 1.78
MBD3-208ENST00000590830 PAWRQ96IZ0 340 aaKnown RBP26.18■■□□□ 1.78
MBD3-208ENST00000590830 ACAD9Q9H845 621 aa26.18■■□□□ 1.78
MBD3-208ENST00000590830 CCPG1Q9ULG6 757 aa26.18■■□□□ 1.78
MBD3-208ENST00000590830 ERICH6BQ5W0A0 696 aa26.17■■□□□ 1.78
MBD3-208ENST00000590830 RALYLQ86SE5 291 aaKnown RBP26.17■■□□□ 1.78
MBD3-208ENST00000590830 ANKLE1Q8NAG6 615 aa26.17■■□□□ 1.78
MBD3-208ENST00000590830 A1CFQ9NQ94 594 aaKnown RBP26.17■■□□□ 1.78
MBD3-208ENST00000590830 DDX20Q9UHI6 824 aaKnown RBP26.17■■□□□ 1.78
MBD3-208ENST00000590830 IFIT3O14879 490 aaKnown RBP26.16■■□□□ 1.78
MBD3-208ENST00000590830 CNTN2Q02246 1040 aa26.16■■□□□ 1.78
MBD3-208ENST00000590830 IGDCC4Q8TDY8 1250 aa26.16■■□□□ 1.78
MBD3-208ENST00000590830 MAMDC4Q6UXC1 1216 aa26.15■■□□□ 1.78
MBD3-208ENST00000590830 STAG2Q8N3U4 1231 aa26.15■■□□□ 1.78
MBD3-208ENST00000590830 GPHNQ9NQX3 736 aaPredicted RBP26.15■■□□□ 1.78
MBD3-208ENST00000590830 SNAI1O95863 264 aaPredicted RBP26.14■■□□□ 1.78
MBD3-208ENST00000590830 ASPRV1Q53RT3 343 aa26.14■■□□□ 1.78
MBD3-208ENST00000590830 FAM133AQ8N9E0 248 aa26.14■■□□□ 1.78
MBD3-208ENST00000590830 SOWAHBA6NEL2 793 aa26.13■■□□□ 1.77
MBD3-208ENST00000590830 SEPT4O43236 478 aa26.13■■□□□ 1.77
MBD3-208ENST00000590830 PARP1P09874 1014 aaKnown RBP26.13■■□□□ 1.77
MBD3-208ENST00000590830 ZNF865P0CJ78 1059 aaPredicted RBP26.13■■□□□ 1.77
MBD3-208ENST00000590830 ANO1Q5XXA6 986 aa26.13■■□□□ 1.77
MBD3-208ENST00000590830 ZNF467Q7Z7K2 595 aaPredicted RBP26.13■■□□□ 1.77
MBD3-208ENST00000590830 ADGRF4Q8IZF3 695 aa26.13■■□□□ 1.77
MBD3-208ENST00000590830 MSL3Q8N5Y2 521 aaKnown RBP26.13■■□□□ 1.77
MBD3-208ENST00000590830 CLEC4DQ8WXI8 215 aa26.13■■□□□ 1.77
MBD3-208ENST00000590830 SMCHD1A6NHR9 2005 aa26.12■■□□□ 1.77
MBD3-208ENST00000590830 POTEB2H3BUK9 544 aa26.12■■□□□ 1.77
MBD3-208ENST00000590830 TMEM67Q5HYA8 995 aa26.12■■□□□ 1.77
MBD3-208ENST00000590830 CASC1Q6TDU7 716 aa26.12■■□□□ 1.77
MBD3-208ENST00000590830 NECAB2Q7Z6G3 386 aa26.12■■□□□ 1.77
MBD3-208ENST00000590830 PURBQ96QR8 312 aaKnown RBP26.12■■□□□ 1.77
MBD3-208ENST00000590830 CYP39A1Q9NYL5 469 aa26.12■■□□□ 1.77
MBD3-208ENST00000590830 NRBP1Q9UHY1 535 aa26.12■■□□□ 1.77
MBD3-208ENST00000590830 MAD2L2Q9UI95 211 aa26.12■■□□□ 1.77
MBD3-208ENST00000590830 ASTN1O14525 1302 aa26.12■■□□□ 1.77
MBD3-208ENST00000590830 PALM3A6NDB9 673 aaPredicted RBP26.11■■□□□ 1.77
MBD3-208ENST00000590830 NFIBO00712 420 aa26.11■■□□□ 1.77
MBD3-208ENST00000590830 WTAPQ15007 396 aa26.11■■□□□ 1.77
MBD3-208ENST00000590830 SLC35G1Q2M3R5 365 aa26.11■■□□□ 1.77
MBD3-208ENST00000590830 JMJD4Q9H9V9 463 aa26.11■■□□□ 1.77
MBD3-208ENST00000590830 SYNGAP1Q96PV0 1343 aa26.11■■□□□ 1.77
MBD3-208ENST00000590830 MSCO60682 206 aa26.1■■□□□ 1.77
MBD3-208ENST00000590830 COL6A1P12109 1028 aa26.1■■□□□ 1.77
MBD3-208ENST00000590830 TROAPQ12815 778 aa26.1■■□□□ 1.77
MBD3-208ENST00000590830 PRPF38BQ5VTL8 546 aaKnown RBP26.1■■□□□ 1.77
MBD3-208ENST00000590830 RASEFQ8IZ41 740 aa26.1■■□□□ 1.77
MBD3-208ENST00000590830 LY9Q9HBG7 655 aa26.1■■□□□ 1.77
MBD3-208ENST00000590830 VAT1LQ9HCJ6 419 aa26.1■■□□□ 1.77
MBD3-208ENST00000590830 DDX49Q9Y6V7 483 aaKnown RBP26.1■■□□□ 1.77
MBD3-208ENST00000590830 PLXNA1Q9UIW2 1896 aa26.1■■□□□ 1.77
MBD3-208ENST00000590830 WDR19Q8NEZ3 1342 aa26.1■■□□□ 1.77
MBD3-208ENST00000590830 ERICH2A1L162 156 aa26.09■■□□□ 1.77
MBD3-208ENST00000590830 PRC1O43663 620 aa26.09■■□□□ 1.77
MBD3-208ENST00000590830 BAATQ14032 418 aaPredicted RBP26.09■■□□□ 1.77
MBD3-208ENST00000590830 CDC37Q16543 378 aaPredicted RBP26.09■■□□□ 1.77
MBD3-208ENST00000590830 NSMFQ6X4W1 530 aa26.09■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms