RNA–Protein interactions for RNA: ENST00000590061.1

SMAD4-210, Transcript of SMAD family member 4, humanhuman

TSL 4

Gene SMAD4, Length 544 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-210ENST00000590061 SLC12A7Q9Y666 1083 aa8.55□□□□□ -1.04
SMAD4-210ENST00000590061 ZNF541Q9H0D2 1346 aa8.54□□□□□ -1.04
SMAD4-210ENST00000590061 CPLX1O14810 134 aa8.54□□□□□ -1.04
SMAD4-210ENST00000590061 DDAH1O94760 285 aa8.54□□□□□ -1.04
SMAD4-210ENST00000590061 ASNSP08243 561 aa8.54□□□□□ -1.04
SMAD4-210ENST00000590061 EPHX2P34913 555 aa8.54□□□□□ -1.04
SMAD4-210ENST00000590061 CDK8P49336 464 aa8.54□□□□□ -1.04
SMAD4-210ENST00000590061 HMGN5P82970 282 aaKnown RBP8.54□□□□□ -1.04
SMAD4-210ENST00000590061 TFAP4Q01664 338 aa8.54□□□□□ -1.04
SMAD4-210ENST00000590061 MAP3K10Q02779 954 aa8.54□□□□□ -1.04
SMAD4-210ENST00000590061 GABPAQ06546 454 aa8.54□□□□□ -1.04
SMAD4-210ENST00000590061 CERKLQ49MI3 558 aaPredicted RBP8.54□□□□□ -1.04
SMAD4-210ENST00000590061 INTS6LQ5JSJ4 861 aaKnown RBP8.54□□□□□ -1.04
SMAD4-210ENST00000590061 IFIT1BQ5T764 474 aaKnown RBP8.54□□□□□ -1.04
SMAD4-210ENST00000590061 PPP1R26Q5T8A7 1209 aaPredicted RBP8.54□□□□□ -1.04
SMAD4-210ENST00000590061 Q6ZUG5 572 aa8.54□□□□□ -1.04
SMAD4-210ENST00000590061 ZBTB33Q86T24 672 aa8.54□□□□□ -1.04
SMAD4-210ENST00000590061 SLC51AQ86UW1 340 aa8.54□□□□□ -1.04
SMAD4-210ENST00000590061 LINC00528Q8N1L1 170 aa8.54□□□□□ -1.04
SMAD4-210ENST00000590061 WASF1Q92558 559 aa8.54□□□□□ -1.04
SMAD4-210ENST00000590061 UPF3BQ9BZI7 483 aaKnown RBP8.54□□□□□ -1.04
SMAD4-210ENST00000590061 DEFB129Q9H1M3 183 aa8.54□□□□□ -1.04
SMAD4-210ENST00000590061 SLKQ9H2G2 1235 aaPredicted RBP8.54□□□□□ -1.04
SMAD4-210ENST00000590061 XPO5Q9HAV4 1204 aaKnown RBP eCLIP8.54□□□□□ -1.04
SMAD4-210ENST00000590061 SAP30BPQ9UHR5 308 aaKnown RBP8.54□□□□□ -1.04
SMAD4-210ENST00000590061 PNMA2Q9UL42 364 aa8.54□□□□□ -1.04
SMAD4-210ENST00000590061 DDX52Q9Y2R4 599 aaKnown RBP eCLIP8.54□□□□□ -1.04
SMAD4-210ENST00000590061 FOCADQ5VW36 1801 aa8.54□□□□□ -1.04
SMAD4-210ENST00000590061 ECM29Q5VYK3 1845 aa8.54□□□□□ -1.04
SMAD4-210ENST00000590061 NAV1Q8NEY1 1877 aa8.53□□□□□ -1.04
SMAD4-210ENST00000590061 PLIN4Q96Q06 1357 aa8.53□□□□□ -1.04
SMAD4-210ENST00000590061 BAZ2AQ9UIF9 1905 aaKnown RBP8.53□□□□□ -1.04
SMAD4-210ENST00000590061 B4E1Z4 1266 aa8.53□□□□□ -1.04
SMAD4-210ENST00000590061 TCP10L2B9ZVM9 353 aa8.53□□□□□ -1.04
SMAD4-210ENST00000590061 ZBTB43O43298 467 aa8.53□□□□□ -1.04
SMAD4-210ENST00000590061 CTNND1O60716 968 aaKnown RBP8.53□□□□□ -1.04
SMAD4-210ENST00000590061 DDNO94850 711 aaPredicted RBP8.53□□□□□ -1.04
SMAD4-210ENST00000590061 TTLL1O95922 423 aa8.53□□□□□ -1.04
SMAD4-210ENST00000590061 CHGBP05060 677 aa8.53□□□□□ -1.04
SMAD4-210ENST00000590061 TOP1P11387 765 aaKnown RBP8.53□□□□□ -1.04
SMAD4-210ENST00000590061 BRD2P25440 801 aaKnown RBP8.53□□□□□ -1.04
SMAD4-210ENST00000590061 SMARCA1P28370 1054 aa8.53□□□□□ -1.04
SMAD4-210ENST00000590061 TCP10Q12799 353 aa8.53□□□□□ -1.04
SMAD4-210ENST00000590061 RASA3Q14644 834 aa8.53□□□□□ -1.04
SMAD4-210ENST00000590061 ADCK5Q3MIX3 580 aa8.53□□□□□ -1.04
SMAD4-210ENST00000590061 TBC1D10BQ4KMP7 808 aaPredicted RBP8.53□□□□□ -1.04
SMAD4-210ENST00000590061 TATDN1Q6P1N9 297 aa8.53□□□□□ -1.04
SMAD4-210ENST00000590061 Q6ZVU0 165 aa8.53□□□□□ -1.04
SMAD4-210ENST00000590061 CDC37L1Q7L3B6 337 aa8.53□□□□□ -1.04
SMAD4-210ENST00000590061 USP48Q86UV5 1035 aa8.53□□□□□ -1.04
SMAD4-210ENST00000590061 TBC1D10CQ8IV04 446 aa8.53□□□□□ -1.04
SMAD4-210ENST00000590061 TEX2Q8IWB9 1127 aa8.53□□□□□ -1.04
SMAD4-210ENST00000590061 TRIM22Q8IYM9 498 aa8.53□□□□□ -1.04
SMAD4-210ENST00000590061 CTCFLQ8NI51 663 aaPredicted RBP8.53□□□□□ -1.04
SMAD4-210ENST00000590061 ZNF341Q9BYN7 854 aa8.53□□□□□ -1.04
SMAD4-210ENST00000590061 KAT14Q9H8E8 782 aa8.53□□□□□ -1.04
SMAD4-210ENST00000590061 ARHGEF10LQ9HCE6 1279 aa8.53□□□□□ -1.04
SMAD4-210ENST00000590061 PGAP2Q9UHJ9 254 aa8.53□□□□□ -1.04
SMAD4-210ENST00000590061 GOLGB1Q14789 3259 aaKnown RBP8.53□□□□□ -1.04
SMAD4-210ENST00000590061 TIAM2Q8IVF5 1701 aa8.52□□□□□ -1.05
SMAD4-210ENST00000590061 CLRN2A0PK11 232 aa8.52□□□□□ -1.05
SMAD4-210ENST00000590061 ESPNB1AK53 854 aa8.52□□□□□ -1.05
SMAD4-210ENST00000590061 SH2B2O14492 632 aaPredicted RBP8.52□□□□□ -1.05
SMAD4-210ENST00000590061 WIPF1O43516 503 aa8.52□□□□□ -1.05
SMAD4-210ENST00000590061 PFKFB2O60825 505 aa8.52□□□□□ -1.05
SMAD4-210ENST00000590061 XBP1P17861 261 aa8.52□□□□□ -1.05
SMAD4-210ENST00000590061 PLCD1P51178 756 aa8.52□□□□□ -1.05
SMAD4-210ENST00000590061 AK2P54819 239 aa8.52□□□□□ -1.05
SMAD4-210ENST00000590061 FKBP1BP68106 108 aa8.52□□□□□ -1.05
SMAD4-210ENST00000590061 NUCB2P80303 420 aa8.52□□□□□ -1.05
SMAD4-210ENST00000590061 AKAP17AQ02040 695 aaKnown RBP8.52□□□□□ -1.05
SMAD4-210ENST00000590061 NFIAQ12857 509 aa8.52□□□□□ -1.05
SMAD4-210ENST00000590061 ABCB5Q2M3G0 1257 aa8.52□□□□□ -1.05
SMAD4-210ENST00000590061 NBPF9Q3BBW0 867 aa8.52□□□□□ -1.05
SMAD4-210ENST00000590061 PNMA1Q8ND90 353 aa8.52□□□□□ -1.05
SMAD4-210ENST00000590061 BANK1Q8NDB2 785 aa8.52□□□□□ -1.05
SMAD4-210ENST00000590061 IGDCC4Q8TDY8 1250 aa8.52□□□□□ -1.05
SMAD4-210ENST00000590061 BRF1Q92994 677 aa8.52□□□□□ -1.05
SMAD4-210ENST00000590061 TMX3Q96JJ7 454 aa8.52□□□□□ -1.05
SMAD4-210ENST00000590061 TAF1DQ9H5J8 278 aaPredicted RBP8.52□□□□□ -1.05
SMAD4-210ENST00000590061 AS3MTQ9HBK9 375 aa8.52□□□□□ -1.05
SMAD4-210ENST00000590061 NXF1Q9UBU9 619 aaKnown RBP8.52□□□□□ -1.05
SMAD4-210ENST00000590061 ATP6V1DQ9Y5K8 247 aa8.52□□□□□ -1.05
SMAD4-210ENST00000590061 COL4A5P29400 1685 aa8.52□□□□□ -1.05
SMAD4-210ENST00000590061 LAMB1P07942 1786 aa8.51□□□□□ -1.05
SMAD4-210ENST00000590061 RASA1P20936 1047 aa8.51□□□□□ -1.05
SMAD4-210ENST00000590061 EPS15P42566 896 aa8.51□□□□□ -1.05
SMAD4-210ENST00000590061 IREB2P48200 963 aaKnown RBP8.51□□□□□ -1.05
SMAD4-210ENST00000590061 METAP2P50579 478 aaKnown RBP eCLIP8.51□□□□□ -1.05
SMAD4-210ENST00000590061 PRELPP51888 382 aa8.51□□□□□ -1.05
SMAD4-210ENST00000590061 CUL4AQ13619 759 aa8.51□□□□□ -1.05
SMAD4-210ENST00000590061 GPATCH4Q5T3I0 446 aaKnown RBP8.51□□□□□ -1.05
SMAD4-210ENST00000590061 ANGEL2Q5VTE6 544 aaKnown RBP8.51□□□□□ -1.05
SMAD4-210ENST00000590061 STOX1Q6ZVD7 989 aa8.51□□□□□ -1.05
SMAD4-210ENST00000590061 ARMC9Q7Z3E5 817 aa8.51□□□□□ -1.05
SMAD4-210ENST00000590061 KRT26Q7Z3Y9 468 aa8.51□□□□□ -1.05
SMAD4-210ENST00000590061 LDHDQ86WU2 507 aa8.51□□□□□ -1.05
SMAD4-210ENST00000590061 NPAS3Q8IXF0 933 aa8.51□□□□□ -1.05
SMAD4-210ENST00000590061 ZNF526Q8TF50 670 aaPredicted RBP8.51□□□□□ -1.05
SMAD4-210ENST00000590061 MKL1Q969V6 931 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms