RNA–Protein interactions for RNA: ENST00000589201.1

LINC00654-202, long intergenic non-protein coding RNA 654, humanhuman

TSL 3 BASIC

Gene LINC00654, Length 579 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00654-202ENST00000589201 NECTIN1Q15223 517 aa23.29■■□□□ 1.32
LINC00654-202ENST00000589201 IFIT1BQ5T764 474 aaKnown RBP23.29■■□□□ 1.32
LINC00654-202ENST00000589201 OLFML2BQ68BL8 750 aa23.29■■□□□ 1.32
LINC00654-202ENST00000589201 CHST3Q7LGC8 479 aa23.29■■□□□ 1.32
LINC00654-202ENST00000589201 MAML3Q96JK9 1138 aa23.29■■□□□ 1.32
LINC00654-202ENST00000589201 HOMER2Q9NSB8 354 aa23.29■■□□□ 1.32
LINC00654-202ENST00000589201 SLC27A2O14975 620 aa23.28■■□□□ 1.32
LINC00654-202ENST00000589201 ZNF792Q3KQV3 632 aa23.28■■□□□ 1.32
LINC00654-202ENST00000589201 CREB3L3Q68CJ9 461 aa23.28■■□□□ 1.32
LINC00654-202ENST00000589201 CHST13Q8NET6 341 aa23.28■■□□□ 1.32
LINC00654-202ENST00000589201 CRISPLD2Q9H0B8 497 aa23.28■■□□□ 1.32
LINC00654-202ENST00000589201 RANBP17Q9H2T7 1088 aaKnown RBP23.28■■□□□ 1.32
LINC00654-202ENST00000589201 IFIT3O14879 490 aaKnown RBP23.27■■□□□ 1.32
LINC00654-202ENST00000589201 GPATCH4Q5T3I0 446 aaKnown RBP23.27■■□□□ 1.32
LINC00654-202ENST00000589201 DDX11Q96FC9 970 aa23.27■■□□□ 1.32
LINC00654-202ENST00000589201 FBXO40Q9UH90 709 aa23.27■■□□□ 1.32
LINC00654-202ENST00000589201 ALAS1P13196 640 aa23.26■■□□□ 1.31
LINC00654-202ENST00000589201 DHX30Q7L2E3 1194 aaKnown RBP eCLIP23.26■■□□□ 1.31
LINC00654-202ENST00000589201 MB21D2Q8IYB1 491 aaPredicted RBP23.26■■□□□ 1.31
LINC00654-202ENST00000589201 ANKRD35Q8N283 1001 aa23.26■■□□□ 1.31
LINC00654-202ENST00000589201 TRPV1Q8NER1 839 aa23.26■■□□□ 1.31
LINC00654-202ENST00000589201 TRERF1Q96PN7 1200 aa23.26■■□□□ 1.31
LINC00654-202ENST00000589201 UBA5Q9GZZ9 404 aa23.26■■□□□ 1.31
LINC00654-202ENST00000589201 CPVLQ9H3G5 476 aa23.26■■□□□ 1.31
LINC00654-202ENST00000589201 RNF146Q9NTX7 359 aa23.26■■□□□ 1.31
LINC00654-202ENST00000589201 DIS3Q9Y2L1 958 aaKnown RBP23.26■■□□□ 1.31
LINC00654-202ENST00000589201 DNAJC25-GNG10A0A024R161 153 aa23.25■■□□□ 1.31
LINC00654-202ENST00000589201 ICAM1P05362 532 aa23.25■■□□□ 1.31
LINC00654-202ENST00000589201 TAL1P17542 331 aaPredicted RBP23.25■■□□□ 1.31
LINC00654-202ENST00000589201 ANTXR2P58335 489 aa23.25■■□□□ 1.31
LINC00654-202ENST00000589201 ACAD9Q9H845 621 aa23.25■■□□□ 1.31
LINC00654-202ENST00000589201 SENP2Q9HC62 589 aa23.25■■□□□ 1.31
LINC00654-202ENST00000589201 CCPG1Q9ULG6 757 aa23.25■■□□□ 1.31
LINC00654-202ENST00000589201 SMCHD1A6NHR9 2005 aa23.25■■□□□ 1.31
LINC00654-202ENST00000589201 PLXNA1Q9UIW2 1896 aa23.24■■□□□ 1.31
LINC00654-202ENST00000589201 ERICH2A1L162 156 aa23.24■■□□□ 1.31
LINC00654-202ENST00000589201 TKFCQ3LXA3 575 aa23.24■■□□□ 1.31
LINC00654-202ENST00000589201 ASPRV1Q53RT3 343 aa23.24■■□□□ 1.31
LINC00654-202ENST00000589201 PRAMEF19Q5SWL8 479 aa23.24■■□□□ 1.31
LINC00654-202ENST00000589201 UBE2Q1Q7Z7E8 422 aa23.24■■□□□ 1.31
LINC00654-202ENST00000589201 PARP1P09874 1014 aaKnown RBP23.23■■□□□ 1.31
LINC00654-202ENST00000589201 CYBAP13498 195 aa23.23■■□□□ 1.31
LINC00654-202ENST00000589201 CAPN2P17655 700 aa23.23■■□□□ 1.31
LINC00654-202ENST00000589201 CNGA1P29973 690 aa23.23■■□□□ 1.31
LINC00654-202ENST00000589201 COL9A3Q14050 684 aaPredicted RBP23.23■■□□□ 1.31
LINC00654-202ENST00000589201 WTAPQ15007 396 aa23.23■■□□□ 1.31
LINC00654-202ENST00000589201 SART3Q15020 963 aaKnown RBP23.23■■□□□ 1.31
LINC00654-202ENST00000589201 MUM1L1Q5H9M0 696 aa23.23■■□□□ 1.31
LINC00654-202ENST00000589201 TMEM67Q5HYA8 995 aa23.23■■□□□ 1.31
LINC00654-202ENST00000589201 LHX8Q68G74 356 aa23.23■■□□□ 1.31
LINC00654-202ENST00000589201 IGDCC4Q8TDY8 1250 aa23.23■■□□□ 1.31
LINC00654-202ENST00000589201 TINF2Q9BSI4 451 aa23.23■■□□□ 1.31
LINC00654-202ENST00000589201 FARP2O94887 1054 aaPredicted RBP23.22■■□□□ 1.31
LINC00654-202ENST00000589201 A1CFQ9NQ94 594 aaKnown RBP23.22■■□□□ 1.31
LINC00654-202ENST00000589201 OGDHLQ9ULD0 1010 aa23.22■■□□□ 1.31
LINC00654-202ENST00000589201 PDE4DIPQ5VU43 2346 aa23.22■■□□□ 1.31
LINC00654-202ENST00000589201 RNF20Q5VTR2 975 aa23.21■■□□□ 1.31
LINC00654-202ENST00000589201 ADGRF4Q8IZF3 695 aa23.21■■□□□ 1.31
LINC00654-202ENST00000589201 STAG2Q8N3U4 1231 aa23.21■■□□□ 1.31
LINC00654-202ENST00000589201 GPHNQ9NQX3 736 aaPredicted RBP23.21■■□□□ 1.31
LINC00654-202ENST00000589201 PRC1O43663 620 aa23.2■■□□□ 1.3
LINC00654-202ENST00000589201 MCM5P33992 734 aa23.2■■□□□ 1.3
LINC00654-202ENST00000589201 CNTN2Q02246 1040 aa23.2■■□□□ 1.3
LINC00654-202ENST00000589201 FGD4Q96M96 766 aa23.2■■□□□ 1.3
LINC00654-202ENST00000589201 VAT1LQ9HCJ6 419 aa23.2■■□□□ 1.3
LINC00654-202ENST00000589201 DDX20Q9UHI6 824 aaKnown RBP23.2■■□□□ 1.3
LINC00654-202ENST00000589201 POTEB2H3BUK9 544 aa23.19■■□□□ 1.3
LINC00654-202ENST00000589201 RASEFQ8IZ41 740 aa23.19■■□□□ 1.3
LINC00654-202ENST00000589201 ANKLE1Q8NAG6 615 aa23.19■■□□□ 1.3
LINC00654-202ENST00000589201 PAWRQ96IZ0 340 aaKnown RBP23.19■■□□□ 1.3
LINC00654-202ENST00000589201 MAD2L2Q9UI95 211 aa23.19■■□□□ 1.3
LINC00654-202ENST00000589201 PALM3A6NDB9 673 aaPredicted RBP23.18■■□□□ 1.3
LINC00654-202ENST00000589201 KLRF2D3W0D1 207 aa23.18■■□□□ 1.3
LINC00654-202ENST00000589201 MNX1P50219 401 aaPredicted RBP23.18■■□□□ 1.3
LINC00654-202ENST00000589201 TROAPQ12815 778 aa23.18■■□□□ 1.3
LINC00654-202ENST00000589201 MAMDC4Q6UXC1 1216 aa23.18■■□□□ 1.3
LINC00654-202ENST00000589201 NSMFQ6X4W1 530 aa23.18■■□□□ 1.3
LINC00654-202ENST00000589201 ZNF467Q7Z7K2 595 aaPredicted RBP23.18■■□□□ 1.3
LINC00654-202ENST00000589201 MSL3Q8N5Y2 521 aaKnown RBP23.18■■□□□ 1.3
LINC00654-202ENST00000589201 FAM133AQ8N9E0 248 aa23.18■■□□□ 1.3
LINC00654-202ENST00000589201 DIS3LQ8TF46 1054 aaKnown RBP23.18■■□□□ 1.3
LINC00654-202ENST00000589201 MTA3Q9BTC8 594 aa23.18■■□□□ 1.3
LINC00654-202ENST00000589201 JMJD4Q9H9V9 463 aa23.18■■□□□ 1.3
LINC00654-202ENST00000589201 LY9Q9HBG7 655 aa23.18■■□□□ 1.3
LINC00654-202ENST00000589201 CYP39A1Q9NYL5 469 aa23.18■■□□□ 1.3
LINC00654-202ENST00000589201 PFASO15067 1338 aa23.17■■□□□ 1.3
LINC00654-202ENST00000589201 WDR19Q8NEZ3 1342 aa23.17■■□□□ 1.3
LINC00654-202ENST00000589201 NFIBO00712 420 aa23.17■■□□□ 1.3
LINC00654-202ENST00000589201 SEPT4O43236 478 aa23.17■■□□□ 1.3
LINC00654-202ENST00000589201 DHX16O60231 1041 aaKnown RBP23.17■■□□□ 1.3
LINC00654-202ENST00000589201 MSCO60682 206 aa23.17■■□□□ 1.3
LINC00654-202ENST00000589201 SNAI1O95863 264 aaPredicted RBP23.17■■□□□ 1.3
LINC00654-202ENST00000589201 GRM4Q14833 912 aa23.17■■□□□ 1.3
LINC00654-202ENST00000589201 CDC37Q16543 378 aaPredicted RBP23.17■■□□□ 1.3
LINC00654-202ENST00000589201 ANO1Q5XXA6 986 aa23.17■■□□□ 1.3
LINC00654-202ENST00000589201 CATIPQ7Z7H3 387 aa23.17■■□□□ 1.3
LINC00654-202ENST00000589201 CLEC4DQ8WXI8 215 aa23.17■■□□□ 1.3
LINC00654-202ENST00000589201 NRBP1Q9UHY1 535 aa23.17■■□□□ 1.3
LINC00654-202ENST00000589201 PNMA2Q9UL42 364 aa23.17■■□□□ 1.3
LINC00654-202ENST00000589201 SYNGAP1Q96PV0 1343 aa23.16■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms