RNA–Protein interactions for RNA: ENST00000587623.1

CTDP1-204, Transcript of CTD phosphatase subunit 1, humanhuman

TSL 2

Gene CTDP1, Length 435 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1-204ENST00000587623 SYNE3Q6ZMZ3 975 aa10.16□□□□□ -0.78
CTDP1-204ENST00000587623 REPS2Q8NFH8 660 aa10.16□□□□□ -0.78
CTDP1-204ENST00000587623 U2AF1L4Q8WU68 220 aaKnown RBP10.16□□□□□ -0.78
CTDP1-204ENST00000587623 TRERF1Q96PN7 1200 aa10.16□□□□□ -0.78
CTDP1-204ENST00000587623 RNF146Q9NTX7 359 aa10.16□□□□□ -0.78
CTDP1-204ENST00000587623 CNPY2Q9Y2B0 182 aa10.16□□□□□ -0.78
CTDP1-204ENST00000587623 DIS3Q9Y2L1 958 aaKnown RBP10.16□□□□□ -0.78
CTDP1-204ENST00000587623 PFASO15067 1338 aa10.15□□□□□ -0.78
CTDP1-204ENST00000587623 CCDC69A6NI79 296 aa10.15□□□□□ -0.78
CTDP1-204ENST00000587623 FARP2O94887 1054 aaPredicted RBP10.15□□□□□ -0.78
CTDP1-204ENST00000587623 ICAM1P05362 532 aa10.15□□□□□ -0.78
CTDP1-204ENST00000587623 PGK2P07205 417 aa10.15□□□□□ -0.78
CTDP1-204ENST00000587623 GOLGA8HP0CJ92 632 aa10.15□□□□□ -0.78
CTDP1-204ENST00000587623 KIF5BP33176 963 aa10.15□□□□□ -0.78
CTDP1-204ENST00000587623 SNAP25P60880 206 aa10.15□□□□□ -0.78
CTDP1-204ENST00000587623 CACNB2Q08289 660 aaPredicted RBP10.15□□□□□ -0.78
CTDP1-204ENST00000587623 TTBK2Q6IQ55 1244 aa10.15□□□□□ -0.78
CTDP1-204ENST00000587623 CYB5R4Q7L1T6 521 aa10.15□□□□□ -0.78
CTDP1-204ENST00000587623 MSL3Q8N5Y2 521 aaKnown RBP10.15□□□□□ -0.78
CTDP1-204ENST00000587623 NPLOC4Q8TAT6 608 aa10.15□□□□□ -0.78
CTDP1-204ENST00000587623 TMEM87BQ96K49 555 aa10.15□□□□□ -0.78
CTDP1-204ENST00000587623 AGBL1Q96MI9 1066 aa10.15□□□□□ -0.78
CTDP1-204ENST00000587623 MPHOSPH6Q99547 160 aaKnown RBP10.15□□□□□ -0.78
CTDP1-204ENST00000587623 MTA3Q9BTC8 594 aa10.15□□□□□ -0.78
CTDP1-204ENST00000587623 PAK6Q9NQU5 681 aaPredicted RBP10.15□□□□□ -0.78
CTDP1-204ENST00000587623 RLFQ13129 1914 aa10.15□□□□□ -0.79
CTDP1-204ENST00000587623 B4DLN1 442 aa10.14□□□□□ -0.79
CTDP1-204ENST00000587623 PRC1O43663 620 aa10.14□□□□□ -0.79
CTDP1-204ENST00000587623 COBLO75128 1261 aa10.14□□□□□ -0.79
CTDP1-204ENST00000587623 HMGB1P09429 215 aaKnown RBP10.14□□□□□ -0.79
CTDP1-204ENST00000587623 SNHG28P0DPA3 235 aa10.14□□□□□ -0.79
CTDP1-204ENST00000587623 CYP2C19P33261 490 aa10.14□□□□□ -0.79
CTDP1-204ENST00000587623 MRPL12P52815 198 aaKnown RBP10.14□□□□□ -0.79
CTDP1-204ENST00000587623 TRIM32Q13049 653 aa10.14□□□□□ -0.79
CTDP1-204ENST00000587623 NSMFQ6X4W1 530 aa10.14□□□□□ -0.79
CTDP1-204ENST00000587623 CHST3Q7LGC8 479 aa10.14□□□□□ -0.79
CTDP1-204ENST00000587623 CTCFLQ8NI51 663 aaPredicted RBP10.14□□□□□ -0.79
CTDP1-204ENST00000587623 NUP133Q8WUM0 1156 aa10.14□□□□□ -0.79
CTDP1-204ENST00000587623 MAML3Q96JK9 1138 aa10.14□□□□□ -0.79
CTDP1-204ENST00000587623 TINF2Q9BSI4 451 aa10.14□□□□□ -0.79
CTDP1-204ENST00000587623 HTATIP2Q9BUP3 242 aa10.14□□□□□ -0.79
CTDP1-204ENST00000587623 UBA5Q9GZZ9 404 aa10.14□□□□□ -0.79
CTDP1-204ENST00000587623 RANBP17Q9H2T7 1088 aaKnown RBP10.14□□□□□ -0.79
CTDP1-204ENST00000587623 VAT1LQ9HCJ6 419 aa10.14□□□□□ -0.79
CTDP1-204ENST00000587623 NRBP1Q9UHY1 535 aa10.14□□□□□ -0.79
CTDP1-204ENST00000587623 RIPK3Q9Y572 518 aa10.14□□□□□ -0.79
CTDP1-204ENST00000587623 PLXNB2O15031 1838 aa10.14□□□□□ -0.79
CTDP1-204ENST00000587623 COL11A1P12107 1806 aaPredicted RBP10.14□□□□□ -0.79
CTDP1-204ENST00000587623 A0A0G2JMZ2 1700 aa10.13□□□□□ -0.79
CTDP1-204ENST00000587623 HTTP42858 3142 aa10.13□□□□□ -0.79
CTDP1-204ENST00000587623 PARP14Q460N5 1801 aa10.13□□□□□ -0.79
CTDP1-204ENST00000587623 PTPDC1A2A3K4 754 aa10.13□□□□□ -0.79
CTDP1-204ENST00000587623 ASB14A6NK59 587 aa10.13□□□□□ -0.79
CTDP1-204ENST00000587623 KLRF2D3W0D1 207 aa10.13□□□□□ -0.79
CTDP1-204ENST00000587623 MYCNP04198 464 aaPredicted RBP10.13□□□□□ -0.79
CTDP1-204ENST00000587623 CALM1P0DP23 149 aa10.13□□□□□ -0.79
CTDP1-204ENST00000587623 CALM2P0DP24 149 aa10.13□□□□□ -0.79
CTDP1-204ENST00000587623 CALM3P0DP25 149 aa10.13□□□□□ -0.79
CTDP1-204ENST00000587623 GNAQP50148 359 aa10.13□□□□□ -0.79
CTDP1-204ENST00000587623 NECTIN1Q15223 517 aa10.13□□□□□ -0.79
CTDP1-204ENST00000587623 SEC23AQ15436 765 aa10.13□□□□□ -0.79
CTDP1-204ENST00000587623 MAP3K21Q5TCX8 1036 aa10.13□□□□□ -0.79
CTDP1-204ENST00000587623 RASGRP2Q7LDG7 609 aa10.13□□□□□ -0.79
CTDP1-204ENST00000587623 NECAB2Q7Z6G3 386 aa10.13□□□□□ -0.79
CTDP1-204ENST00000587623 MB21D2Q8IYB1 491 aaPredicted RBP10.13□□□□□ -0.79
CTDP1-204ENST00000587623 ANKLE1Q8NAG6 615 aa10.13□□□□□ -0.79
CTDP1-204ENST00000587623 NEK1Q96PY6 1258 aa10.13□□□□□ -0.79
CTDP1-204ENST00000587623 FLRT1Q9NZU1 646 aa10.13□□□□□ -0.79
CTDP1-204ENST00000587623 ADD3Q9UEY8 706 aaKnown RBP10.13□□□□□ -0.79
CTDP1-204ENST00000587623 SLC12A7Q9Y666 1083 aa10.13□□□□□ -0.79
CTDP1-204ENST00000587623 ZNFX1Q9P2E3 1918 aaKnown RBP10.13□□□□□ -0.79
CTDP1-204ENST00000587623 WDR19Q8NEZ3 1342 aa10.12□□□□□ -0.79
CTDP1-204ENST00000587623 DDAH1O94760 285 aa10.12□□□□□ -0.79
CTDP1-204ENST00000587623 PSMA5P28066 241 aa10.12□□□□□ -0.79
CTDP1-204ENST00000587623 CCND3P30281 292 aaPredicted RBP10.12□□□□□ -0.79
CTDP1-204ENST00000587623 GRM4Q14833 912 aa10.12□□□□□ -0.79
CTDP1-204ENST00000587623 CDC37Q16543 378 aaPredicted RBP10.12□□□□□ -0.79
CTDP1-204ENST00000587623 ZNF792Q3KQV3 632 aa10.12□□□□□ -0.79
CTDP1-204ENST00000587623 USH1GQ495M9 461 aa10.12□□□□□ -0.79
CTDP1-204ENST00000587623 STOX1Q6ZVD7 989 aa10.12□□□□□ -0.79
CTDP1-204ENST00000587623 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.12□□□□□ -0.79
CTDP1-204ENST00000587623 ZNF467Q7Z7K2 595 aaPredicted RBP10.12□□□□□ -0.79
CTDP1-204ENST00000587623 FBXO11Q86XK2 927 aa10.12□□□□□ -0.79
CTDP1-204ENST00000587623 MCF2L2Q86YR7 1114 aa10.12□□□□□ -0.79
CTDP1-204ENST00000587623 ADGRF4Q8IZF3 695 aa10.12□□□□□ -0.79
CTDP1-204ENST00000587623 ARRDC4Q8NCT1 418 aa10.12□□□□□ -0.79
CTDP1-204ENST00000587623 DPF3Q92784 378 aa10.12□□□□□ -0.79
CTDP1-204ENST00000587623 LZTS2Q9BRK4 669 aa10.12□□□□□ -0.79
CTDP1-204ENST00000587623 SPC25Q9HBM1 224 aa10.12□□□□□ -0.79
CTDP1-204ENST00000587623 DDX20Q9UHI6 824 aaKnown RBP10.12□□□□□ -0.79
CTDP1-204ENST00000587623 ZHX1Q9UKY1 873 aaPredicted RBP10.12□□□□□ -0.79
CTDP1-204ENST00000587623 NAP1L2Q9ULW6 460 aaPredicted RBP10.12□□□□□ -0.79
CTDP1-204ENST00000587623 MRPL11Q9Y3B7 192 aaKnown RBP10.12□□□□□ -0.79
CTDP1-204ENST00000587623 CEP290O15078 2479 aa10.12□□□□□ -0.79
CTDP1-204ENST00000587623 ZNF536O15090 1300 aa10.11□□□□□ -0.79
CTDP1-204ENST00000587623 ABCB11O95342 1321 aa10.11□□□□□ -0.79
CTDP1-204ENST00000587623 SYNGAP1Q96PV0 1343 aa10.11□□□□□ -0.79
CTDP1-204ENST00000587623 CENPFP49454 3210 aa10.11□□□□□ -0.79
CTDP1-204ENST00000587623 KBTBD13C9JR72 458 aa10.11□□□□□ -0.79
CTDP1-204ENST00000587623 SEPT4O43236 478 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms