RNA–Protein interactions for RNA: ENST00000582370.1

PDLIM1P3-201, Transcript of PDZ and LIM domain 1 pseudogene 3, humanhuman

BASIC

Gene PDLIM1P3, Length 599 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1P3-201ENST00000582370 CRNKL1Q9BZJ0 848 aaKnown RBP10.34□□□□□ -0.75
PDLIM1P3-201ENST00000582370 IL23AQ9NPF7 189 aa10.34□□□□□ -0.75
PDLIM1P3-201ENST00000582370 ATP8A2Q9NTI2 1148 aa10.34□□□□□ -0.75
PDLIM1P3-201ENST00000582370 AATFQ9NY61 560 aaKnown RBP eCLIP10.34□□□□□ -0.75
PDLIM1P3-201ENST00000582370 HOXC10Q9NYD6 342 aa10.34□□□□□ -0.75
PDLIM1P3-201ENST00000582370 PALD1Q9ULE6 856 aa10.34□□□□□ -0.75
PDLIM1P3-201ENST00000582370 YBX2Q9Y2T7 364 aaKnown RBP10.34□□□□□ -0.75
PDLIM1P3-201ENST00000582370 BRWD1Q9NSI6 2320 aa10.34□□□□□ -0.75
PDLIM1P3-201ENST00000582370 MCM3APO60318 1980 aa10.34□□□□□ -0.75
PDLIM1P3-201ENST00000582370 SYNRGQ9UMZ2 1314 aa10.33□□□□□ -0.76
PDLIM1P3-201ENST00000582370 ACRP10323 421 aa10.33□□□□□ -0.76
PDLIM1P3-201ENST00000582370 COG2Q14746 738 aa10.33□□□□□ -0.76
PDLIM1P3-201ENST00000582370 RAB3GAP1Q15042 981 aa10.33□□□□□ -0.76
PDLIM1P3-201ENST00000582370 TATDN1Q6P1N9 297 aa10.33□□□□□ -0.76
PDLIM1P3-201ENST00000582370 KHSRPQ92945 711 aaKnown RBP eCLIP10.33□□□□□ -0.76
PDLIM1P3-201ENST00000582370 GLT1D1Q96MS3 346 aa10.33□□□□□ -0.76
PDLIM1P3-201ENST00000582370 TINF2Q9BSI4 451 aa10.33□□□□□ -0.76
PDLIM1P3-201ENST00000582370 KCNH6Q9H252 994 aa10.33□□□□□ -0.76
PDLIM1P3-201ENST00000582370 U3KPZ7 1027 aaPredicted RBP10.33□□□□□ -0.76
PDLIM1P3-201ENST00000582370 PATL2C9JE40 543 aaKnown RBP10.32□□□□□ -0.76
PDLIM1P3-201ENST00000582370 TLR3O15455 904 aaKnown RBP10.32□□□□□ -0.76
PDLIM1P3-201ENST00000582370 SLC3A2P08195 630 aaKnown RBP10.32□□□□□ -0.76
PDLIM1P3-201ENST00000582370 FCER1AP12319 257 aa10.32□□□□□ -0.76
PDLIM1P3-201ENST00000582370 CST5P28325 142 aaPredicted RBP10.32□□□□□ -0.76
PDLIM1P3-201ENST00000582370 CDK7P50613 346 aa10.32□□□□□ -0.76
PDLIM1P3-201ENST00000582370 ANAPC15P60006 121 aa10.32□□□□□ -0.76
PDLIM1P3-201ENST00000582370 NHLH1Q02575 133 aa10.32□□□□□ -0.76
PDLIM1P3-201ENST00000582370 NMIQ13287 307 aaPredicted RBP10.32□□□□□ -0.76
PDLIM1P3-201ENST00000582370 ALX1Q15699 326 aa10.32□□□□□ -0.76
PDLIM1P3-201ENST00000582370 C8orf34Q49A92 452 aa10.32□□□□□ -0.76
PDLIM1P3-201ENST00000582370 NCAPG2Q86XI2 1143 aa10.32□□□□□ -0.76
PDLIM1P3-201ENST00000582370 KLHDC9Q8NEP7 349 aa10.32□□□□□ -0.76
PDLIM1P3-201ENST00000582370 ACER1Q8TDN7 264 aa10.32□□□□□ -0.76
PDLIM1P3-201ENST00000582370 PPP1R12CQ9BZL4 782 aa10.32□□□□□ -0.76
PDLIM1P3-201ENST00000582370 ZNF287Q9HBT7 754 aa10.32□□□□□ -0.76
PDLIM1P3-201ENST00000582370 DIS3Q9Y2L1 958 aaKnown RBP10.32□□□□□ -0.76
PDLIM1P3-201ENST00000582370 PCDHA11Q9Y5I1 949 aa10.32□□□□□ -0.76
PDLIM1P3-201ENST00000582370 MTCH2Q9Y6C9 303 aa10.32□□□□□ -0.76
PDLIM1P3-201ENST00000582370 ZNF318Q5VUA4 2279 aa10.32□□□□□ -0.76
PDLIM1P3-201ENST00000582370 USP34Q70CQ2 3546 aa10.32□□□□□ -0.76
PDLIM1P3-201ENST00000582370 LAMA4Q16363 1823 aa10.31□□□□□ -0.76
PDLIM1P3-201ENST00000582370 GPAA1O43292 621 aa10.31□□□□□ -0.76
PDLIM1P3-201ENST00000582370 SLC25A27O95847 323 aa10.31□□□□□ -0.76
PDLIM1P3-201ENST00000582370 FGBP02675 491 aa10.31□□□□□ -0.76
PDLIM1P3-201ENST00000582370 ZNF865P0CJ78 1059 aaPredicted RBP10.31□□□□□ -0.76
PDLIM1P3-201ENST00000582370 KRT32Q14532 448 aa10.31□□□□□ -0.76
PDLIM1P3-201ENST00000582370 ABCB5Q2M3G0 1257 aa10.31□□□□□ -0.76
PDLIM1P3-201ENST00000582370 CCSAPQ6IQ19 270 aaPredicted RBP10.31□□□□□ -0.76
PDLIM1P3-201ENST00000582370 FAM126BQ8IXS8 530 aa10.31□□□□□ -0.76
PDLIM1P3-201ENST00000582370 PCSK9Q8NBP7 692 aaKnown RBP10.31□□□□□ -0.76
PDLIM1P3-201ENST00000582370 MAP4K1Q92918 833 aa10.31□□□□□ -0.76
PDLIM1P3-201ENST00000582370 HLA-CQ95604 372 aa10.31□□□□□ -0.76
PDLIM1P3-201ENST00000582370 STRBPQ96SI9 672 aaKnown RBP10.31□□□□□ -0.76
PDLIM1P3-201ENST00000582370 TANGO6Q9C0B7 1094 aa10.31□□□□□ -0.76
PDLIM1P3-201ENST00000582370 EHD4Q9H223 541 aa10.31□□□□□ -0.76
PDLIM1P3-201ENST00000582370 CABP5Q9NP86 173 aa10.31□□□□□ -0.76
PDLIM1P3-201ENST00000582370 ANO2Q9NQ90 1003 aa10.31□□□□□ -0.76
PDLIM1P3-201ENST00000582370 ARPP21Q9UBL0 812 aaPredicted RBP10.31□□□□□ -0.76
PDLIM1P3-201ENST00000582370 SERPINB13Q9UIV8 391 aa10.31□□□□□ -0.76
PDLIM1P3-201ENST00000582370 CNPY2Q9Y2B0 182 aa10.31□□□□□ -0.76
PDLIM1P3-201ENST00000582370 TANC1Q9C0D5 1861 aa10.3□□□□□ -0.76
PDLIM1P3-201ENST00000582370 A0A0D9SFI3 127 aa10.3□□□□□ -0.76
PDLIM1P3-201ENST00000582370 A0A0U1RQG5 324 aaPredicted RBP10.3□□□□□ -0.76
PDLIM1P3-201ENST00000582370 ARVCFO00192 962 aa10.3□□□□□ -0.76
PDLIM1P3-201ENST00000582370 HMGB1P09429 215 aaKnown RBP10.3□□□□□ -0.76
PDLIM1P3-201ENST00000582370 PLS1Q14651 629 aa10.3□□□□□ -0.76
PDLIM1P3-201ENST00000582370 KCNA10Q16322 511 aa10.3□□□□□ -0.76
PDLIM1P3-201ENST00000582370 IMMTQ16891 758 aaKnown RBP10.3□□□□□ -0.76
PDLIM1P3-201ENST00000582370 CERKLQ49MI3 558 aaPredicted RBP10.3□□□□□ -0.76
PDLIM1P3-201ENST00000582370 SKAP1Q86WV1 359 aa10.3□□□□□ -0.76
PDLIM1P3-201ENST00000582370 MSL3Q8N5Y2 521 aaKnown RBP10.3□□□□□ -0.76
PDLIM1P3-201ENST00000582370 OSBP2Q969R2 916 aa10.3□□□□□ -0.76
PDLIM1P3-201ENST00000582370 LENG1Q96BZ8 264 aaPredicted RBP10.3□□□□□ -0.76
PDLIM1P3-201ENST00000582370 FAM227BQ96M60 508 aa10.3□□□□□ -0.76
PDLIM1P3-201ENST00000582370 RIOK1Q9BRS2 568 aaKnown RBP10.3□□□□□ -0.76
PDLIM1P3-201ENST00000582370 SAP30BPQ9UHR5 308 aaKnown RBP10.3□□□□□ -0.76
PDLIM1P3-201ENST00000582370 CACNA1AO00555 2505 aa10.3□□□□□ -0.76
PDLIM1P3-201ENST00000582370 PTPRSQ13332 1948 aa10.29□□□□□ -0.76
PDLIM1P3-201ENST00000582370 DUSP11O75319 330 aaKnown RBP10.29□□□□□ -0.76
PDLIM1P3-201ENST00000582370 MBD4O95243 580 aa10.29□□□□□ -0.76
PDLIM1P3-201ENST00000582370 APPP05067 770 aa10.29□□□□□ -0.76
PDLIM1P3-201ENST00000582370 ASGR1P07306 291 aa10.29□□□□□ -0.76
PDLIM1P3-201ENST00000582370 HSPD1P10809 573 aaKnown RBP10.29□□□□□ -0.76
PDLIM1P3-201ENST00000582370 TAL1P17542 331 aaPredicted RBP10.29□□□□□ -0.76
PDLIM1P3-201ENST00000582370 DSG3P32926 999 aa10.29□□□□□ -0.76
PDLIM1P3-201ENST00000582370 CYP2C18P33260 490 aa10.29□□□□□ -0.76
PDLIM1P3-201ENST00000582370 RABGGTBP53611 331 aa10.29□□□□□ -0.76
PDLIM1P3-201ENST00000582370 OTOP2Q7RTS6 562 aa10.29□□□□□ -0.76
PDLIM1P3-201ENST00000582370 TTC6Q86TZ1 520 aa10.29□□□□□ -0.76
PDLIM1P3-201ENST00000582370 MMP19Q99542 508 aa10.29□□□□□ -0.76
PDLIM1P3-201ENST00000582370 PUS7LQ9H0K6 701 aaKnown RBP10.29□□□□□ -0.76
PDLIM1P3-201ENST00000582370 NAPBQ9H115 298 aa10.29□□□□□ -0.76
PDLIM1P3-201ENST00000582370 RNF41Q9H4P4 317 aaPredicted RBP10.29□□□□□ -0.76
PDLIM1P3-201ENST00000582370 FAM184BQ9ULE4 1060 aa10.29□□□□□ -0.76
PDLIM1P3-201ENST00000582370 SLC4A7Q9Y6M7 1214 aa10.29□□□□□ -0.76
PDLIM1P3-201ENST00000582370 SLC4A4Q9Y6R1 1079 aa10.29□□□□□ -0.76
PDLIM1P3-201ENST00000582370 SCN5AQ14524 2016 aa10.29□□□□□ -0.76
PDLIM1P3-201ENST00000582370 ZNF213O14771 459 aa10.28□□□□□ -0.76
PDLIM1P3-201ENST00000582370 CD4P01730 458 aa10.28□□□□□ -0.76
PDLIM1P3-201ENST00000582370 ALADP13716 330 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms