RNA–Protein interactions for RNA: ENST00000580182.5

PPP4R1-215, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 3

Gene PPP4R1, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-215ENST00000580182 IFIT1BQ5T764 474 aaKnown RBP21.88■■□□□ 1.09
PPP4R1-215ENST00000580182 MB21D2Q8IYB1 491 aaPredicted RBP21.88■■□□□ 1.09
PPP4R1-215ENST00000580182 U2AF1L4Q8WU68 220 aaKnown RBP21.88■■□□□ 1.09
PPP4R1-215ENST00000580182 HMX1Q9NP08 348 aaPredicted RBP21.88■■□□□ 1.09
PPP4R1-215ENST00000580182 MKI67P46013 3256 aaKnown RBP21.87■■□□□ 1.09
PPP4R1-215ENST00000580182 IFIT3O14879 490 aaKnown RBP21.87■■□□□ 1.09
PPP4R1-215ENST00000580182 SGPL1O95470 568 aa21.87■■□□□ 1.09
PPP4R1-215ENST00000580182 IGHA2P01877 340 aa21.87■■□□□ 1.09
PPP4R1-215ENST00000580182 CCND3P30281 292 aaPredicted RBP21.87■■□□□ 1.09
PPP4R1-215ENST00000580182 UBA5Q9GZZ9 404 aa21.87■■□□□ 1.09
PPP4R1-215ENST00000580182 RANBP17Q9H2T7 1088 aaKnown RBP21.87■■□□□ 1.09
PPP4R1-215ENST00000580182 ZNF792Q3KQV3 632 aa21.86■■□□□ 1.09
PPP4R1-215ENST00000580182 MFSD14CQ5VZR4 134 aa21.86■■□□□ 1.09
PPP4R1-215ENST00000580182 MAML3Q96JK9 1138 aa21.86■■□□□ 1.09
PPP4R1-215ENST00000580182 TNRC18O15417 2968 aaPredicted RBP21.85■■□□□ 1.09
PPP4R1-215ENST00000580182 ALAS1P13196 640 aa21.85■■□□□ 1.09
PPP4R1-215ENST00000580182 GPATCH4Q5T3I0 446 aaKnown RBP21.85■■□□□ 1.09
PPP4R1-215ENST00000580182 OLFML2BQ68BL8 750 aa21.85■■□□□ 1.09
PPP4R1-215ENST00000580182 TRPV1Q8NER1 839 aa21.85■■□□□ 1.09
PPP4R1-215ENST00000580182 CHST13Q8NET6 341 aa21.85■■□□□ 1.09
PPP4R1-215ENST00000580182 GPHNQ9NQX3 736 aaPredicted RBP21.85■■□□□ 1.09
PPP4R1-215ENST00000580182 RNF146Q9NTX7 359 aa21.85■■□□□ 1.09
PPP4R1-215ENST00000580182 SLC5A4Q9NY91 659 aa21.85■■□□□ 1.09
PPP4R1-215ENST00000580182 TFRCP02786 760 aaKnown RBP21.84■■□□□ 1.09
PPP4R1-215ENST00000580182 MUM1L1Q5H9M0 696 aa21.84■■□□□ 1.09
PPP4R1-215ENST00000580182 IGDCC4Q8TDY8 1250 aa21.84■■□□□ 1.09
PPP4R1-215ENST00000580182 DDX11Q96FC9 970 aa21.84■■□□□ 1.09
PPP4R1-215ENST00000580182 TRERF1Q96PN7 1200 aa21.84■■□□□ 1.09
PPP4R1-215ENST00000580182 CCPG1Q9ULG6 757 aa21.84■■□□□ 1.09
PPP4R1-215ENST00000580182 SMCHD1A6NHR9 2005 aa21.84■■□□□ 1.09
PPP4R1-215ENST00000580182 ERICH2A1L162 156 aa21.83■■□□□ 1.09
PPP4R1-215ENST00000580182 ICAM1P05362 532 aa21.83■■□□□ 1.09
PPP4R1-215ENST00000580182 PARP1P09874 1014 aaKnown RBP21.83■■□□□ 1.09
PPP4R1-215ENST00000580182 WTAPQ15007 396 aa21.83■■□□□ 1.09
PPP4R1-215ENST00000580182 TMEM67Q5HYA8 995 aa21.83■■□□□ 1.09
PPP4R1-215ENST00000580182 PRAMEF19Q5SWL8 479 aa21.83■■□□□ 1.09
PPP4R1-215ENST00000580182 DHX30Q7L2E3 1194 aaKnown RBP eCLIP21.83■■□□□ 1.09
PPP4R1-215ENST00000580182 RASEFQ8IZ41 740 aa21.83■■□□□ 1.09
PPP4R1-215ENST00000580182 ANKRD35Q8N283 1001 aa21.83■■□□□ 1.09
PPP4R1-215ENST00000580182 STAG2Q8N3U4 1231 aa21.83■■□□□ 1.09
PPP4R1-215ENST00000580182 CRISPLD2Q9H0B8 497 aa21.83■■□□□ 1.09
PPP4R1-215ENST00000580182 ACAD9Q9H845 621 aa21.83■■□□□ 1.09
PPP4R1-215ENST00000580182 FBXO40Q9UH90 709 aa21.83■■□□□ 1.09
PPP4R1-215ENST00000580182 PLXNA1Q9UIW2 1896 aa21.83■■□□□ 1.08
PPP4R1-215ENST00000580182 DNAJC25-GNG10A0A024R161 153 aa21.82■■□□□ 1.08
PPP4R1-215ENST00000580182 PRC1O43663 620 aa21.82■■□□□ 1.08
PPP4R1-215ENST00000580182 ASPRV1Q53RT3 343 aa21.82■■□□□ 1.08
PPP4R1-215ENST00000580182 CYBAP13498 195 aa21.81■■□□□ 1.08
PPP4R1-215ENST00000580182 SART3Q15020 963 aaKnown RBP21.81■■□□□ 1.08
PPP4R1-215ENST00000580182 TKFCQ3LXA3 575 aa21.81■■□□□ 1.08
PPP4R1-215ENST00000580182 LHX8Q68G74 356 aa21.81■■□□□ 1.08
PPP4R1-215ENST00000580182 ADGRF4Q8IZF3 695 aa21.81■■□□□ 1.08
PPP4R1-215ENST00000580182 FGD4Q96M96 766 aa21.81■■□□□ 1.08
PPP4R1-215ENST00000580182 LY9Q9HBG7 655 aa21.81■■□□□ 1.08
PPP4R1-215ENST00000580182 A1CFQ9NQ94 594 aaKnown RBP21.81■■□□□ 1.08
PPP4R1-215ENST00000580182 MAD2L2Q9UI95 211 aa21.81■■□□□ 1.08
PPP4R1-215ENST00000580182 DIS3Q9Y2L1 958 aaKnown RBP21.81■■□□□ 1.08
PPP4R1-215ENST00000580182 CNGA1P29973 690 aa21.8■■□□□ 1.08
PPP4R1-215ENST00000580182 MCM5P33992 734 aa21.8■■□□□ 1.08
PPP4R1-215ENST00000580182 CNTN2Q02246 1040 aa21.8■■□□□ 1.08
PPP4R1-215ENST00000580182 ADCK5Q3MIX3 580 aa21.8■■□□□ 1.08
PPP4R1-215ENST00000580182 RNF20Q5VTR2 975 aa21.8■■□□□ 1.08
PPP4R1-215ENST00000580182 TINF2Q9BSI4 451 aa21.8■■□□□ 1.08
PPP4R1-215ENST00000580182 LRRC2Q9BYS8 371 aa21.8■■□□□ 1.08
PPP4R1-215ENST00000580182 VAT1LQ9HCJ6 419 aa21.8■■□□□ 1.08
PPP4R1-215ENST00000580182 CDC37Q16543 378 aaPredicted RBP21.79■■□□□ 1.08
PPP4R1-215ENST00000580182 UBE2Q1Q7Z7E8 422 aa21.79■■□□□ 1.08
PPP4R1-215ENST00000580182 PALM3A6NDB9 673 aaPredicted RBP21.78■■□□□ 1.08
PPP4R1-215ENST00000580182 KLRF2D3W0D1 207 aa21.78■■□□□ 1.08
PPP4R1-215ENST00000580182 NFIBO00712 420 aa21.78■■□□□ 1.08
PPP4R1-215ENST00000580182 SH2B2O14492 632 aaPredicted RBP21.78■■□□□ 1.08
PPP4R1-215ENST00000580182 TROAPQ12815 778 aa21.78■■□□□ 1.08
PPP4R1-215ENST00000580182 GRM4Q14833 912 aa21.78■■□□□ 1.08
PPP4R1-215ENST00000580182 NSMFQ6X4W1 530 aa21.78■■□□□ 1.08
PPP4R1-215ENST00000580182 DIS3LQ8TF46 1054 aaKnown RBP21.78■■□□□ 1.08
PPP4R1-215ENST00000580182 NEK1Q96PY6 1258 aa21.78■■□□□ 1.08
PPP4R1-215ENST00000580182 PURBQ96QR8 312 aaKnown RBP21.78■■□□□ 1.08
PPP4R1-215ENST00000580182 MYL10Q9BUA6 226 aa21.78■■□□□ 1.08
PPP4R1-215ENST00000580182 JMJD4Q9H9V9 463 aa21.78■■□□□ 1.08
PPP4R1-215ENST00000580182 OGDHLQ9ULD0 1010 aa21.78■■□□□ 1.08
PPP4R1-215ENST00000580182 POTEB2H3BUK9 544 aa21.77■■□□□ 1.08
PPP4R1-215ENST00000580182 DHX16O60231 1041 aaKnown RBP21.77■■□□□ 1.08
PPP4R1-215ENST00000580182 FARP2O94887 1054 aaPredicted RBP21.77■■□□□ 1.08
PPP4R1-215ENST00000580182 MNX1P50219 401 aaPredicted RBP21.77■■□□□ 1.08
PPP4R1-215ENST00000580182 SLC35G1Q2M3R5 365 aa21.77■■□□□ 1.08
PPP4R1-215ENST00000580182 TSGA10IPQ3SY00 556 aa21.77■■□□□ 1.08
PPP4R1-215ENST00000580182 USH1GQ495M9 461 aa21.77■■□□□ 1.08
PPP4R1-215ENST00000580182 ANO1Q5XXA6 986 aa21.77■■□□□ 1.08
PPP4R1-215ENST00000580182 FAM133AQ8N9E0 248 aa21.77■■□□□ 1.08
PPP4R1-215ENST00000580182 CLEC4DQ8WXI8 215 aa21.77■■□□□ 1.08
PPP4R1-215ENST00000580182 CYP39A1Q9NYL5 469 aa21.77■■□□□ 1.08
PPP4R1-215ENST00000580182 DDX20Q9UHI6 824 aaKnown RBP21.77■■□□□ 1.08
PPP4R1-215ENST00000580182 SOWAHBA6NEL2 793 aa21.76■■□□□ 1.07
PPP4R1-215ENST00000580182 SNAI1O95863 264 aaPredicted RBP21.76■■□□□ 1.07
PPP4R1-215ENST00000580182 QRICH1Q2TAL8 776 aa21.76■■□□□ 1.07
PPP4R1-215ENST00000580182 CATIPQ7Z7H3 387 aa21.76■■□□□ 1.07
PPP4R1-215ENST00000580182 ZNF654Q8IZM8 581 aa21.76■■□□□ 1.07
PPP4R1-215ENST00000580182 NUP133Q8WUM0 1156 aa21.76■■□□□ 1.07
PPP4R1-215ENST00000580182 TMEM87BQ96K49 555 aa21.76■■□□□ 1.07
PPP4R1-215ENST00000580182 TCEANC2Q96MN5 208 aa21.76■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms