RNA–Protein interactions for RNA: ENST00000578216.1

AP003396.5-201, humanhuman

TSL 5 BASIC

Gene AP003396.5, Length 632 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP003396.5-201ENST00000578216 MAMDC4Q6UXC1 1216 aa13.18□□□□□ -0.3
AP003396.5-201ENST00000578216 NOL8Q76FK4 1167 aaKnown RBP13.18□□□□□ -0.3
AP003396.5-201ENST00000578216 GLT1D1Q96MS3 346 aa13.18□□□□□ -0.3
AP003396.5-201ENST00000578216 SEC62Q99442 399 aaKnown RBP13.18□□□□□ -0.3
AP003396.5-201ENST00000578216 ABHD16BQ9H3Z7 469 aa13.18□□□□□ -0.3
AP003396.5-201ENST00000578216 TOMM22Q9NS69 142 aa13.18□□□□□ -0.3
AP003396.5-201ENST00000578216 TMEM39AQ9NV64 488 aa13.18□□□□□ -0.3
AP003396.5-201ENST00000578216 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.18□□□□□ -0.3
AP003396.5-201ENST00000578216 RIPK3Q9Y572 518 aa13.18□□□□□ -0.3
AP003396.5-201ENST00000578216 POTEB2H3BUK9 544 aa13.17□□□□□ -0.3
AP003396.5-201ENST00000578216 RANBP6O60518 1105 aaKnown RBP13.17□□□□□ -0.3
AP003396.5-201ENST00000578216 DUSP11O75319 330 aaKnown RBP13.17□□□□□ -0.3
AP003396.5-201ENST00000578216 C6orf222P0C671 652 aaPredicted RBP13.17□□□□□ -0.3
AP003396.5-201ENST00000578216 GSPT1P15170 499 aaKnown RBP13.17□□□□□ -0.3
AP003396.5-201ENST00000578216 ACLYP53396 1101 aa13.17□□□□□ -0.3
AP003396.5-201ENST00000578216 ACVR2BQ13705 512 aa13.17□□□□□ -0.3
AP003396.5-201ENST00000578216 CCDC96Q2M329 555 aa13.17□□□□□ -0.3
AP003396.5-201ENST00000578216 TKFCQ3LXA3 575 aa13.17□□□□□ -0.3
AP003396.5-201ENST00000578216 CCDC174Q6PII3 467 aa13.17□□□□□ -0.3
AP003396.5-201ENST00000578216 STAG1Q8WVM7 1258 aa13.17□□□□□ -0.3
AP003396.5-201ENST00000578216 LENG1Q96BZ8 264 aaPredicted RBP13.17□□□□□ -0.3
AP003396.5-201ENST00000578216 GMCL1Q96IK5 515 aa13.17□□□□□ -0.3
AP003396.5-201ENST00000578216 PPP4R2Q9NY27 417 aa13.17□□□□□ -0.3
AP003396.5-201ENST00000578216 GREB1LQ9C091 1923 aaPredicted RBP13.17□□□□□ -0.3
AP003396.5-201ENST00000578216 SYNRGQ9UMZ2 1314 aa13.16□□□□□ -0.3
AP003396.5-201ENST00000578216 RANBP2P49792 3224 aaKnown RBP13.16□□□□□ -0.3
AP003396.5-201ENST00000578216 ZNFX1Q9P2E3 1918 aaKnown RBP13.16□□□□□ -0.3
AP003396.5-201ENST00000578216 DNAJC25-GNG10A0A024R161 153 aa13.16□□□□□ -0.3
AP003396.5-201ENST00000578216 ASB14A6NK59 587 aa13.16□□□□□ -0.3
AP003396.5-201ENST00000578216 TRIM6-TRIM34B2RNG4 842 aa13.16□□□□□ -0.3
AP003396.5-201ENST00000578216 ADAMTS4O75173 837 aa13.16□□□□□ -0.3
AP003396.5-201ENST00000578216 SNAI1O95863 264 aaPredicted RBP13.16□□□□□ -0.3
AP003396.5-201ENST00000578216 MCCP23508 829 aa13.16□□□□□ -0.3
AP003396.5-201ENST00000578216 FPGSQ05932 587 aa13.16□□□□□ -0.3
AP003396.5-201ENST00000578216 SHHQ15465 462 aa13.16□□□□□ -0.3
AP003396.5-201ENST00000578216 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.16□□□□□ -0.3
AP003396.5-201ENST00000578216 ARMCX2Q7L311 632 aa13.16□□□□□ -0.3
AP003396.5-201ENST00000578216 RNPC3Q96LT9 517 aaKnown RBP13.16□□□□□ -0.3
AP003396.5-201ENST00000578216 FAM161BQ96MY7 647 aa13.16□□□□□ -0.3
AP003396.5-201ENST00000578216 TOX2Q96NM4 488 aa13.16□□□□□ -0.3
AP003396.5-201ENST00000578216 RNF146Q9NTX7 359 aa13.16□□□□□ -0.3
AP003396.5-201ENST00000578216 MTMR7Q9Y216 660 aa13.16□□□□□ -0.3
AP003396.5-201ENST00000578216 PLXNA1Q9UIW2 1896 aa13.16□□□□□ -0.3
AP003396.5-201ENST00000578216 MYH4Q9Y623 1939 aa13.15□□□□□ -0.3
AP003396.5-201ENST00000578216 TRIM43BA6NCK2 446 aa13.15□□□□□ -0.3
AP003396.5-201ENST00000578216 KIAA0355O15063 1070 aa13.15□□□□□ -0.3
AP003396.5-201ENST00000578216 TLR3O15455 904 aaKnown RBP13.15□□□□□ -0.3
AP003396.5-201ENST00000578216 ALAS1P13196 640 aa13.15□□□□□ -0.3
AP003396.5-201ENST00000578216 CTDSPL2Q05D32 466 aa13.15□□□□□ -0.3
AP003396.5-201ENST00000578216 KCNA10Q16322 511 aa13.15□□□□□ -0.3
AP003396.5-201ENST00000578216 CCDC144BQ3MJ40 725 aa13.15□□□□□ -0.3
AP003396.5-201ENST00000578216 CCDC129Q6ZRS4 1044 aa13.15□□□□□ -0.3
AP003396.5-201ENST00000578216 SH3RF1Q7Z6J0 888 aa13.15□□□□□ -0.3
AP003396.5-201ENST00000578216 TRIM43Q96BQ3 446 aaPredicted RBP13.15□□□□□ -0.3
AP003396.5-201ENST00000578216 CHMP4CQ96CF2 233 aa13.15□□□□□ -0.3
AP003396.5-201ENST00000578216 HELLSQ9NRZ9 838 aa13.15□□□□□ -0.3
AP003396.5-201ENST00000578216 ELP1O95163 1332 aa13.14□□□□□ -0.31
AP003396.5-201ENST00000578216 A0A0U1RQG5 324 aaPredicted RBP13.14□□□□□ -0.31
AP003396.5-201ENST00000578216 HIP1O00291 1037 aa13.14□□□□□ -0.31
AP003396.5-201ENST00000578216 ZEB2O60315 1214 aa13.14□□□□□ -0.31
AP003396.5-201ENST00000578216 PLA2G6O60733 806 aa13.14□□□□□ -0.31
AP003396.5-201ENST00000578216 SDSP20132 328 aa13.14□□□□□ -0.31
AP003396.5-201ENST00000578216 CST5P28325 142 aaPredicted RBP13.14□□□□□ -0.31
AP003396.5-201ENST00000578216 SMAD3P84022 425 aaKnown RBP13.14□□□□□ -0.31
AP003396.5-201ENST00000578216 RRP12Q5JTH9 1297 aaKnown RBP13.14□□□□□ -0.31
AP003396.5-201ENST00000578216 GNASQ5JWF2 1037 aa13.14□□□□□ -0.31
AP003396.5-201ENST00000578216 RCSD1Q6JBY9 416 aa13.14□□□□□ -0.31
AP003396.5-201ENST00000578216 KCTD1Q719H9 257 aa13.14□□□□□ -0.31
AP003396.5-201ENST00000578216 ANKRD33Q7Z3H0 272 aa13.14□□□□□ -0.31
AP003396.5-201ENST00000578216 CCDC144CPQ8IYA2 1237 aa13.14□□□□□ -0.31
AP003396.5-201ENST00000578216 DCAF4Q8WV16 495 aa13.14□□□□□ -0.31
AP003396.5-201ENST00000578216 RILPL2Q969X0 211 aa13.14□□□□□ -0.31
AP003396.5-201ENST00000578216 TRERF1Q96PN7 1200 aa13.14□□□□□ -0.31
AP003396.5-201ENST00000578216 AP5M1Q9H0R1 490 aa13.14□□□□□ -0.31
AP003396.5-201ENST00000578216 CCPG1Q9ULG6 757 aa13.14□□□□□ -0.31
AP003396.5-201ENST00000578216 LAMA4Q16363 1823 aa13.13□□□□□ -0.31
AP003396.5-201ENST00000578216 A0A0D9SFI3 127 aa13.13□□□□□ -0.31
AP003396.5-201ENST00000578216 MFAP1P55081 439 aaKnown RBP13.13□□□□□ -0.31
AP003396.5-201ENST00000578216 GJA9P57773 515 aa13.13□□□□□ -0.31
AP003396.5-201ENST00000578216 TNFAIP2Q03169 654 aa13.13□□□□□ -0.31
AP003396.5-201ENST00000578216 C9orf50Q5SZB4 431 aa13.13□□□□□ -0.31
AP003396.5-201ENST00000578216 KLHDC9Q8NEP7 349 aa13.13□□□□□ -0.31
AP003396.5-201ENST00000578216 FAM227BQ96M60 508 aa13.13□□□□□ -0.31
AP003396.5-201ENST00000578216 AGBL1Q96MI9 1066 aa13.13□□□□□ -0.31
AP003396.5-201ENST00000578216 MPHOSPH6Q99547 160 aaKnown RBP13.13□□□□□ -0.31
AP003396.5-201ENST00000578216 PNMA2Q9UL42 364 aa13.13□□□□□ -0.31
AP003396.5-201ENST00000578216 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.13□□□□□ -0.31
AP003396.5-201ENST00000578216 LTBP2Q14767 1821 aa13.13□□□□□ -0.31
AP003396.5-201ENST00000578216 FOXP2O15409 715 aa13.12□□□□□ -0.31
AP003396.5-201ENST00000578216 ORC4O43929 436 aa13.12□□□□□ -0.31
AP003396.5-201ENST00000578216 ASGR1P07306 291 aa13.12□□□□□ -0.31
AP003396.5-201ENST00000578216 CNTN2Q02246 1040 aa13.12□□□□□ -0.31
AP003396.5-201ENST00000578216 NMIQ13287 307 aaPredicted RBP13.12□□□□□ -0.31
AP003396.5-201ENST00000578216 PPIGQ13427 754 aaKnown RBP eCLIP13.12□□□□□ -0.31
AP003396.5-201ENST00000578216 MCMDC2Q4G0Z9 681 aa13.12□□□□□ -0.31
AP003396.5-201ENST00000578216 BMP2KLQ5H9B9 411 aa13.12□□□□□ -0.31
AP003396.5-201ENST00000578216 NSMFQ6X4W1 530 aa13.12□□□□□ -0.31
AP003396.5-201ENST00000578216 FAM133AQ8N9E0 248 aa13.12□□□□□ -0.31
AP003396.5-201ENST00000578216 UPF3AQ9H1J1 476 aaKnown RBP13.12□□□□□ -0.31
AP003396.5-201ENST00000578216 A1CFQ9NQ94 594 aaKnown RBP13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms