RNA–Protein interactions for RNA: ENST00000576353.5

SNF8-217, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 700 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-217ENST00000576353 CCDC174Q6PII3 467 aa27.51■■□□□ 1.99
SNF8-217ENST00000576353 DHX30Q7L2E3 1194 aaKnown RBP eCLIP27.51■■□□□ 1.99
SNF8-217ENST00000576353 AGBL1Q96MI9 1066 aa27.51■■□□□ 1.99
SNF8-217ENST00000576353 RANBP17Q9H2T7 1088 aaKnown RBP27.51■■□□□ 1.99
SNF8-217ENST00000576353 COL11A1P12107 1806 aaPredicted RBP27.51■■□□□ 1.99
SNF8-217ENST00000576353 IGHA2P01877 340 aa27.5■■□□□ 1.99
SNF8-217ENST00000576353 TFRCP02786 760 aaKnown RBP27.5■■□□□ 1.99
SNF8-217ENST00000576353 PGK2P07205 417 aa27.5■■□□□ 1.99
SNF8-217ENST00000576353 SHISA4Q96DD7 197 aa27.5■■□□□ 1.99
SNF8-217ENST00000576353 MAML3Q96JK9 1138 aa27.5■■□□□ 1.99
SNF8-217ENST00000576353 PNMA2Q9UL42 364 aa27.5■■□□□ 1.99
SNF8-217ENST00000576353 ZNF236Q9UL36 1845 aa27.5■■□□□ 1.99
SNF8-217ENST00000576353 ICAM1P05362 532 aa27.49■■□□□ 1.99
SNF8-217ENST00000576353 CYP2C19P33261 490 aa27.49■■□□□ 1.99
SNF8-217ENST00000576353 SNAP25P60880 206 aa27.49■■□□□ 1.99
SNF8-217ENST00000576353 ZNF792Q3KQV3 632 aa27.49■■□□□ 1.99
SNF8-217ENST00000576353 ASPRV1Q53RT3 343 aa27.49■■□□□ 1.99
SNF8-217ENST00000576353 ANKRD35Q8N283 1001 aa27.49■■□□□ 1.99
SNF8-217ENST00000576353 CRISPLD2Q9H0B8 497 aa27.49■■□□□ 1.99
SNF8-217ENST00000576353 ACAD9Q9H845 621 aa27.49■■□□□ 1.99
SNF8-217ENST00000576353 PARP1P09874 1014 aaKnown RBP27.48■■□□□ 1.99
SNF8-217ENST00000576353 GOLGA8HP0CJ92 632 aa27.48■■□□□ 1.99
SNF8-217ENST00000576353 MB21D2Q8IYB1 491 aaPredicted RBP27.48■■□□□ 1.99
SNF8-217ENST00000576353 HOMER2Q9NSB8 354 aa27.48■■□□□ 1.99
SNF8-217ENST00000576353 RNF146Q9NTX7 359 aa27.48■■□□□ 1.99
SNF8-217ENST00000576353 CCPG1Q9ULG6 757 aa27.48■■□□□ 1.99
SNF8-217ENST00000576353 ALAS1P13196 640 aa27.47■■□□□ 1.99
SNF8-217ENST00000576353 CCND3P30281 292 aaPredicted RBP27.47■■□□□ 1.99
SNF8-217ENST00000576353 WTAPQ15007 396 aa27.47■■□□□ 1.99
SNF8-217ENST00000576353 TRERF1Q96PN7 1200 aa27.47■■□□□ 1.99
SNF8-217ENST00000576353 MTA3Q9BTC8 594 aa27.47■■□□□ 1.99
SNF8-217ENST00000576353 DNAJC25-GNG10A0A024R161 153 aa27.46■■□□□ 1.99
SNF8-217ENST00000576353 TMEM67Q5HYA8 995 aa27.46■■□□□ 1.99
SNF8-217ENST00000576353 CHST3Q7LGC8 479 aa27.46■■□□□ 1.99
SNF8-217ENST00000576353 MCM5P33992 734 aa27.45■■□□□ 1.98
SNF8-217ENST00000576353 UBA5Q9GZZ9 404 aa27.45■■□□□ 1.98
SNF8-217ENST00000576353 CNGA1P29973 690 aa27.44■■□□□ 1.98
SNF8-217ENST00000576353 ANTXR2P58335 489 aa27.44■■□□□ 1.98
SNF8-217ENST00000576353 MSL3Q8N5Y2 521 aaKnown RBP27.44■■□□□ 1.98
SNF8-217ENST00000576353 IGDCC4Q8TDY8 1250 aa27.44■■□□□ 1.98
SNF8-217ENST00000576353 TINF2Q9BSI4 451 aa27.44■■□□□ 1.98
SNF8-217ENST00000576353 MSCO60682 206 aa27.43■■□□□ 1.98
SNF8-217ENST00000576353 CYBAP13498 195 aa27.43■■□□□ 1.98
SNF8-217ENST00000576353 ANKLE1Q8NAG6 615 aa27.43■■□□□ 1.98
SNF8-217ENST00000576353 NRBP1Q9UHY1 535 aa27.43■■□□□ 1.98
SNF8-217ENST00000576353 OGDHLQ9ULD0 1010 aa27.43■■□□□ 1.98
SNF8-217ENST00000576353 PFASO15067 1338 aa27.42■■□□□ 1.98
SNF8-217ENST00000576353 WDR19Q8NEZ3 1342 aa27.42■■□□□ 1.98
SNF8-217ENST00000576353 PRC1O43663 620 aa27.42■■□□□ 1.98
SNF8-217ENST00000576353 FARP2O94887 1054 aaPredicted RBP27.42■■□□□ 1.98
SNF8-217ENST00000576353 CATIPQ7Z7H3 387 aa27.42■■□□□ 1.98
SNF8-217ENST00000576353 ZNF467Q7Z7K2 595 aaPredicted RBP27.42■■□□□ 1.98
SNF8-217ENST00000576353 TMTC2Q8N394 836 aa27.42■■□□□ 1.98
SNF8-217ENST00000576353 TMEM87BQ96K49 555 aa27.42■■□□□ 1.98
SNF8-217ENST00000576353 A1CFQ9NQ94 594 aaKnown RBP27.42■■□□□ 1.98
SNF8-217ENST00000576353 POTEB2H3BUK9 544 aa27.41■■□□□ 1.98
SNF8-217ENST00000576353 REC8O95072 547 aa27.41■■□□□ 1.98
SNF8-217ENST00000576353 TSGA10IPQ3SY00 556 aa27.41■■□□□ 1.98
SNF8-217ENST00000576353 LHX8Q68G74 356 aa27.41■■□□□ 1.98
SNF8-217ENST00000576353 ADGRF4Q8IZF3 695 aa27.41■■□□□ 1.98
SNF8-217ENST00000576353 TRPV1Q8NER1 839 aa27.41■■□□□ 1.98
SNF8-217ENST00000576353 CPVLQ9H3G5 476 aa27.41■■□□□ 1.98
SNF8-217ENST00000576353 DDX20Q9UHI6 824 aaKnown RBP27.41■■□□□ 1.98
SNF8-217ENST00000576353 BRCA2P51587 3418 aa27.4■■□□□ 1.98
SNF8-217ENST00000576353 KLRF2D3W0D1 207 aa27.4■■□□□ 1.98
SNF8-217ENST00000576353 DHX16O60231 1041 aaKnown RBP27.4■■□□□ 1.98
SNF8-217ENST00000576353 MUM1L1Q5H9M0 696 aa27.4■■□□□ 1.98
SNF8-217ENST00000576353 MAMDC4Q6UXC1 1216 aa27.4■■□□□ 1.98
SNF8-217ENST00000576353 UBE2Q1Q7Z7E8 422 aa27.4■■□□□ 1.98
SNF8-217ENST00000576353 SENP2Q9HC62 589 aa27.4■■□□□ 1.98
SNF8-217ENST00000576353 CNPY2Q9Y2B0 182 aa27.4■■□□□ 1.98
SNF8-217ENST00000576353 PALM3A6NDB9 673 aaPredicted RBP27.39■■□□□ 1.98
SNF8-217ENST00000576353 KRT32Q14532 448 aa27.39■■□□□ 1.98
SNF8-217ENST00000576353 GRM4Q14833 912 aa27.39■■□□□ 1.98
SNF8-217ENST00000576353 PRAMEF19Q5SWL8 479 aa27.39■■□□□ 1.98
SNF8-217ENST00000576353 STAG2Q8N3U4 1231 aa27.39■■□□□ 1.98
SNF8-217ENST00000576353 NEK1Q96PY6 1258 aa27.39■■□□□ 1.98
SNF8-217ENST00000576353 LY9Q9HBG7 655 aa27.39■■□□□ 1.98
SNF8-217ENST00000576353 MAD2L2Q9UI95 211 aa27.39■■□□□ 1.98
SNF8-217ENST00000576353 SYNGAP1Q96PV0 1343 aa27.39■■□□□ 1.97
SNF8-217ENST00000576353 SEPT4O43236 478 aa27.38■■□□□ 1.97
SNF8-217ENST00000576353 TROAPQ12815 778 aa27.38■■□□□ 1.97
SNF8-217ENST00000576353 CDC37Q16543 378 aaPredicted RBP27.38■■□□□ 1.97
SNF8-217ENST00000576353 NSMFQ6X4W1 530 aa27.38■■□□□ 1.97
SNF8-217ENST00000576353 FAM133AQ8N9E0 248 aa27.38■■□□□ 1.97
SNF8-217ENST00000576353 VAT1LQ9HCJ6 419 aa27.38■■□□□ 1.97
SNF8-217ENST00000576353 CYP39A1Q9NYL5 469 aa27.38■■□□□ 1.97
SNF8-217ENST00000576353 SH2B2O14492 632 aaPredicted RBP27.37■■□□□ 1.97
SNF8-217ENST00000576353 NFXL1Q6ZNB6 911 aa27.37■■□□□ 1.97
SNF8-217ENST00000576353 JMJD4Q9H9V9 463 aa27.37■■□□□ 1.97
SNF8-217ENST00000576353 DDAH1O94760 285 aa27.36■■□□□ 1.97
SNF8-217ENST00000576353 LIFRP42702 1097 aa27.36■■□□□ 1.97
SNF8-217ENST00000576353 CNTN2Q02246 1040 aa27.36■■□□□ 1.97
SNF8-217ENST00000576353 NECAB2Q7Z6G3 386 aa27.36■■□□□ 1.97
SNF8-217ENST00000576353 RASEFQ8IZ41 740 aa27.36■■□□□ 1.97
SNF8-217ENST00000576353 MAP3K14Q99558 947 aa27.36■■□□□ 1.97
SNF8-217ENST00000576353 HTATIP2Q9BUP3 242 aa27.36■■□□□ 1.97
SNF8-217ENST00000576353 ZNFX1Q9P2E3 1918 aaKnown RBP27.35■■□□□ 1.97
SNF8-217ENST00000576353 CCDC69A6NI79 296 aa27.35■■□□□ 1.97
SNF8-217ENST00000576353 TAL1P17542 331 aaPredicted RBP27.35■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 90.2 ms