RNA–Protein interactions for RNA: ENST00000575426.1

LITAF-217, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 5

Gene LITAF, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-217ENST00000575426 CHST13Q8NET6 341 aa17.73■□□□□ 0.43
LITAF-217ENST00000575426 CTCFLQ8NI51 663 aaPredicted RBP17.73■□□□□ 0.43
LITAF-217ENST00000575426 PXYLP1Q8TE99 480 aa17.73■□□□□ 0.43
LITAF-217ENST00000575426 MMP19Q99542 508 aa17.73■□□□□ 0.43
LITAF-217ENST00000575426 RANBP17Q9H2T7 1088 aaKnown RBP17.73■□□□□ 0.43
LITAF-217ENST00000575426 SLC12A7Q9Y666 1083 aa17.73■□□□□ 0.43
LITAF-217ENST00000575426 BAZ2BQ9UIF8 2168 aaKnown RBP17.73■□□□□ 0.43
LITAF-217ENST00000575426 KLRF2D3W0D1 207 aa17.72■□□□□ 0.43
LITAF-217ENST00000575426 DDAH1O94760 285 aa17.72■□□□□ 0.43
LITAF-217ENST00000575426 XRCC5P13010 732 aaKnown RBP17.72■□□□□ 0.43
LITAF-217ENST00000575426 ALAS1P13196 640 aa17.72■□□□□ 0.43
LITAF-217ENST00000575426 CASTP20810 708 aaKnown RBP17.72■□□□□ 0.43
LITAF-217ENST00000575426 KIF5BP33176 963 aa17.72■□□□□ 0.43
LITAF-217ENST00000575426 UBXN2AP68543 259 aa17.72■□□□□ 0.43
LITAF-217ENST00000575426 GRB14Q14449 540 aa17.72■□□□□ 0.43
LITAF-217ENST00000575426 GRM4Q14833 912 aa17.72■□□□□ 0.43
LITAF-217ENST00000575426 ABRAQ8N0Z2 381 aa17.72■□□□□ 0.43
LITAF-217ENST00000575426 SH3TC2Q8TF17 1288 aa17.72■□□□□ 0.43
LITAF-217ENST00000575426 AGBL1Q96MI9 1066 aa17.72■□□□□ 0.43
LITAF-217ENST00000575426 TCEANC2Q96MN5 208 aa17.72■□□□□ 0.43
LITAF-217ENST00000575426 MAP3K14Q99558 947 aa17.72■□□□□ 0.43
LITAF-217ENST00000575426 VAT1LQ9HCJ6 419 aa17.72■□□□□ 0.43
LITAF-217ENST00000575426 GPHNQ9NQX3 736 aaPredicted RBP17.72■□□□□ 0.43
LITAF-217ENST00000575426 CCPG1Q9ULG6 757 aa17.72■□□□□ 0.43
LITAF-217ENST00000575426 ZNF236Q9UL36 1845 aa17.72■□□□□ 0.43
LITAF-217ENST00000575426 PALM3A6NDB9 673 aaPredicted RBP17.71■□□□□ 0.43
LITAF-217ENST00000575426 ICAM1P05362 532 aa17.71■□□□□ 0.43
LITAF-217ENST00000575426 ADORA2AP29274 412 aa17.71■□□□□ 0.43
LITAF-217ENST00000575426 TROAPQ12815 778 aa17.71■□□□□ 0.43
LITAF-217ENST00000575426 ADGRF4Q8IZF3 695 aa17.71■□□□□ 0.43
LITAF-217ENST00000575426 STAG2Q8N3U4 1231 aa17.71■□□□□ 0.43
LITAF-217ENST00000575426 USP6NLQ92738 828 aa17.71■□□□□ 0.43
LITAF-217ENST00000575426 DDX11Q96FC9 970 aa17.71■□□□□ 0.43
LITAF-217ENST00000575426 APBA2Q99767 749 aa17.71■□□□□ 0.43
LITAF-217ENST00000575426 HOMER2Q9NSB8 354 aa17.71■□□□□ 0.43
LITAF-217ENST00000575426 MAD2L2Q9UI95 211 aa17.71■□□□□ 0.43
LITAF-217ENST00000575426 RIPK3Q9Y572 518 aa17.71■□□□□ 0.43
LITAF-217ENST00000575426 ELNP15502 786 aa17.7■□□□□ 0.42
LITAF-217ENST00000575426 GNAQP50148 359 aa17.7■□□□□ 0.42
LITAF-217ENST00000575426 SGMS1Q86VZ5 419 aa17.7■□□□□ 0.42
LITAF-217ENST00000575426 ANKRD35Q8N283 1001 aa17.7■□□□□ 0.42
LITAF-217ENST00000575426 ARMC5Q96C12 935 aa17.7■□□□□ 0.42
LITAF-217ENST00000575426 TRERF1Q96PN7 1200 aa17.7■□□□□ 0.42
LITAF-217ENST00000575426 CPVLQ9H3G5 476 aa17.7■□□□□ 0.42
LITAF-217ENST00000575426 ACAD9Q9H845 621 aa17.7■□□□□ 0.42
LITAF-217ENST00000575426 RNF146Q9NTX7 359 aa17.7■□□□□ 0.42
LITAF-217ENST00000575426 CYP46A1Q9Y6A2 500 aa17.7■□□□□ 0.42
LITAF-217ENST00000575426 ZNF536O15090 1300 aa17.7■□□□□ 0.42
LITAF-217ENST00000575426 HMGCRP04035 888 aa17.69■□□□□ 0.42
LITAF-217ENST00000575426 CPA1P15085 419 aa17.69■□□□□ 0.42
LITAF-217ENST00000575426 RPS6KB1P23443 525 aa17.69■□□□□ 0.42
LITAF-217ENST00000575426 COL9A3Q14050 684 aaPredicted RBP17.69■□□□□ 0.42
LITAF-217ENST00000575426 Q6ZUG5 572 aa17.69■□□□□ 0.42
LITAF-217ENST00000575426 RUFY3Q7L099 469 aa17.69■□□□□ 0.42
LITAF-217ENST00000575426 MYL10Q9BUA6 226 aa17.69■□□□□ 0.42
LITAF-217ENST00000575426 TMEM106CQ9BVX2 250 aa17.69■□□□□ 0.42
LITAF-217ENST00000575426 TM6SF1Q9BZW5 370 aa17.69■□□□□ 0.42
LITAF-217ENST00000575426 NAP1L2Q9ULW6 460 aaPredicted RBP17.69■□□□□ 0.42
LITAF-217ENST00000575426 CAPN15O75808 1086 aa17.68■□□□□ 0.42
LITAF-217ENST00000575426 MYCP01106 439 aaPredicted RBP17.68■□□□□ 0.42
LITAF-217ENST00000575426 HOXC6P09630 235 aa17.68■□□□□ 0.42
LITAF-217ENST00000575426 ANAPC15P60006 121 aa17.68■□□□□ 0.42
LITAF-217ENST00000575426 CDC37Q16543 378 aaPredicted RBP17.68■□□□□ 0.42
LITAF-217ENST00000575426 ZNF333Q96JL9 665 aa17.68■□□□□ 0.42
LITAF-217ENST00000575426 LZTS2Q9BRK4 669 aa17.68■□□□□ 0.42
LITAF-217ENST00000575426 ZSWIM6Q9HCJ5 1215 aa17.68■□□□□ 0.42
LITAF-217ENST00000575426 ZBTB43O43298 467 aa17.67■□□□□ 0.42
LITAF-217ENST00000575426 SEC24BO95487 1268 aa17.67■□□□□ 0.42
LITAF-217ENST00000575426 INHAP05111 366 aa17.67■□□□□ 0.42
LITAF-217ENST00000575426 TRAF1Q13077 416 aa17.67■□□□□ 0.42
LITAF-217ENST00000575426 C8orf34Q49A92 452 aa17.67■□□□□ 0.42
LITAF-217ENST00000575426 MFSD14CQ5VZR4 134 aa17.67■□□□□ 0.42
LITAF-217ENST00000575426 FBXO11Q86XK2 927 aa17.67■□□□□ 0.42
LITAF-217ENST00000575426 CCDC144CPQ8IYA2 1237 aa17.67■□□□□ 0.42
LITAF-217ENST00000575426 FANCBQ8NB91 859 aa17.67■□□□□ 0.42
LITAF-217ENST00000575426 NPLOC4Q8TAT6 608 aa17.67■□□□□ 0.42
LITAF-217ENST00000575426 TRIB2Q92519 343 aa17.67■□□□□ 0.42
LITAF-217ENST00000575426 JMJD4Q9H9V9 463 aa17.67■□□□□ 0.42
LITAF-217ENST00000575426 KLF18A0A0U1RQI7 1052 aa17.66■□□□□ 0.42
LITAF-217ENST00000575426 COBLO75128 1261 aa17.66■□□□□ 0.42
LITAF-217ENST00000575426 PGK2P07205 417 aa17.66■□□□□ 0.42
LITAF-217ENST00000575426 RXRAP19793 462 aa17.66■□□□□ 0.42
LITAF-217ENST00000575426 CCL14Q16627 93 aa17.66■□□□□ 0.42
LITAF-217ENST00000575426 QRICH1Q2TAL8 776 aa17.66■□□□□ 0.42
LITAF-217ENST00000575426 USH1GQ495M9 461 aa17.66■□□□□ 0.42
LITAF-217ENST00000575426 APOA5Q6Q788 366 aa17.66■□□□□ 0.42
LITAF-217ENST00000575426 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.66■□□□□ 0.42
LITAF-217ENST00000575426 MICU3Q86XE3 530 aa17.66■□□□□ 0.42
LITAF-217ENST00000575426 RAB11FIP4Q86YS3 637 aa17.66■□□□□ 0.42
LITAF-217ENST00000575426 BRF1Q92994 677 aa17.66■□□□□ 0.42
LITAF-217ENST00000575426 RIOX1Q9H6W3 641 aa17.66■□□□□ 0.42
LITAF-217ENST00000575426 RBM28Q9NW13 759 aaKnown RBP17.66■□□□□ 0.42
LITAF-217ENST00000575426 DIS3Q9Y2L1 958 aaKnown RBP17.66■□□□□ 0.42
LITAF-217ENST00000575426 PFASO15067 1338 aa17.66■□□□□ 0.42
LITAF-217ENST00000575426 ZBTB5O15062 677 aa17.65■□□□□ 0.42
LITAF-217ENST00000575426 SMARCA1P28370 1054 aa17.65■□□□□ 0.42
LITAF-217ENST00000575426 APOBRQ0VD83 1088 aa17.65■□□□□ 0.42
LITAF-217ENST00000575426 MUM1L1Q5H9M0 696 aa17.65■□□□□ 0.42
LITAF-217ENST00000575426 NSMFQ6X4W1 530 aa17.65■□□□□ 0.42
LITAF-217ENST00000575426 HOMER1Q86YM7 354 aa17.65■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 108.9 ms