RNA–Protein interactions for RNA: ENST00000575214.1

HCFC1R1-208, Transcript of host cell factor C1 regulator 1, humanhuman

TSL 2

Gene HCFC1R1, Length 1,365 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1R1-208ENST00000575214 U2AF1L4Q8WU68 220 aaKnown RBP24.24■■□□□ 1.47
HCFC1R1-208ENST00000575214 DEFB118Q96PH6 123 aa24.24■■□□□ 1.47
HCFC1R1-208ENST00000575214 RANBP17Q9H2T7 1088 aaKnown RBP24.24■■□□□ 1.47
HCFC1R1-208ENST00000575214 PAK6Q9NQU5 681 aaPredicted RBP24.24■■□□□ 1.47
HCFC1R1-208ENST00000575214 FBXO40Q9UH90 709 aa24.24■■□□□ 1.47
HCFC1R1-208ENST00000575214 BRCA2P51587 3418 aa24.24■■□□□ 1.47
HCFC1R1-208ENST00000575214 WTAPQ15007 396 aa24.23■■□□□ 1.47
HCFC1R1-208ENST00000575214 PARP1P09874 1014 aaKnown RBP24.22■■□□□ 1.47
HCFC1R1-208ENST00000575214 ALAS1P13196 640 aa24.22■■□□□ 1.47
HCFC1R1-208ENST00000575214 CYP2C19P33261 490 aa24.22■■□□□ 1.47
HCFC1R1-208ENST00000575214 ANTXR2P58335 489 aa24.22■■□□□ 1.47
HCFC1R1-208ENST00000575214 ASPRV1Q53RT3 343 aa24.22■■□□□ 1.47
HCFC1R1-208ENST00000575214 TMEM67Q5HYA8 995 aa24.22■■□□□ 1.47
HCFC1R1-208ENST00000575214 OLFML2BQ68BL8 750 aa24.22■■□□□ 1.47
HCFC1R1-208ENST00000575214 SHISA4Q96DD7 197 aa24.22■■□□□ 1.47
HCFC1R1-208ENST00000575214 DDX11Q96FC9 970 aa24.22■■□□□ 1.47
HCFC1R1-208ENST00000575214 RNF146Q9NTX7 359 aa24.22■■□□□ 1.47
HCFC1R1-208ENST00000575214 CCPG1Q9ULG6 757 aa24.22■■□□□ 1.47
HCFC1R1-208ENST00000575214 SGPL1O95470 568 aa24.21■■□□□ 1.47
HCFC1R1-208ENST00000575214 TKFCQ3LXA3 575 aa24.21■■□□□ 1.47
HCFC1R1-208ENST00000575214 ANKRD35Q8N283 1001 aa24.21■■□□□ 1.47
HCFC1R1-208ENST00000575214 MAML3Q96JK9 1138 aa24.21■■□□□ 1.47
HCFC1R1-208ENST00000575214 UBA5Q9GZZ9 404 aa24.21■■□□□ 1.47
HCFC1R1-208ENST00000575214 ACAD9Q9H845 621 aa24.21■■□□□ 1.47
HCFC1R1-208ENST00000575214 ICAM1P05362 532 aa24.2■■□□□ 1.46
HCFC1R1-208ENST00000575214 TRERF1Q96PN7 1200 aa24.2■■□□□ 1.46
HCFC1R1-208ENST00000575214 CPVLQ9H3G5 476 aa24.2■■□□□ 1.46
HCFC1R1-208ENST00000575214 PRC1O43663 620 aa24.19■■□□□ 1.46
HCFC1R1-208ENST00000575214 TFRCP02786 760 aaKnown RBP24.19■■□□□ 1.46
HCFC1R1-208ENST00000575214 TAL1P17542 331 aaPredicted RBP24.19■■□□□ 1.46
HCFC1R1-208ENST00000575214 CCND3P30281 292 aaPredicted RBP24.19■■□□□ 1.46
HCFC1R1-208ENST00000575214 MCM5P33992 734 aa24.19■■□□□ 1.46
HCFC1R1-208ENST00000575214 ZNF792Q3KQV3 632 aa24.19■■□□□ 1.46
HCFC1R1-208ENST00000575214 DHX30Q7L2E3 1194 aaKnown RBP eCLIP24.19■■□□□ 1.46
HCFC1R1-208ENST00000575214 SENP2Q9HC62 589 aa24.19■■□□□ 1.46
HCFC1R1-208ENST00000575214 DIS3Q9Y2L1 958 aaKnown RBP24.19■■□□□ 1.46
HCFC1R1-208ENST00000575214 PDE4DIPQ5VU43 2346 aa24.18■■□□□ 1.46
HCFC1R1-208ENST00000575214 IGDCC4Q8TDY8 1250 aa24.18■■□□□ 1.46
HCFC1R1-208ENST00000575214 TNRC18O15417 2968 aaPredicted RBP24.18■■□□□ 1.46
HCFC1R1-208ENST00000575214 DHX16O60231 1041 aaKnown RBP24.17■■□□□ 1.46
HCFC1R1-208ENST00000575214 REC8O95072 547 aa24.17■■□□□ 1.46
HCFC1R1-208ENST00000575214 DNAJC25-GNG10A0A024R161 153 aa24.16■■□□□ 1.46
HCFC1R1-208ENST00000575214 IGHA2P01877 340 aa24.16■■□□□ 1.46
HCFC1R1-208ENST00000575214 CNGA1P29973 690 aa24.16■■□□□ 1.46
HCFC1R1-208ENST00000575214 MUM1L1Q5H9M0 696 aa24.16■■□□□ 1.46
HCFC1R1-208ENST00000575214 CATIPQ7Z7H3 387 aa24.16■■□□□ 1.46
HCFC1R1-208ENST00000575214 STAG2Q8N3U4 1231 aa24.16■■□□□ 1.46
HCFC1R1-208ENST00000575214 TMEM87BQ96K49 555 aa24.16■■□□□ 1.46
HCFC1R1-208ENST00000575214 MTA3Q9BTC8 594 aa24.16■■□□□ 1.46
HCFC1R1-208ENST00000575214 A1CFQ9NQ94 594 aaKnown RBP24.16■■□□□ 1.46
HCFC1R1-208ENST00000575214 PNMA2Q9UL42 364 aa24.16■■□□□ 1.46
HCFC1R1-208ENST00000575214 CYBAP13498 195 aa24.16■■□□□ 1.46
HCFC1R1-208ENST00000575214 COL9A3Q14050 684 aaPredicted RBP24.16■■□□□ 1.46
HCFC1R1-208ENST00000575214 CDC37Q16543 378 aaPredicted RBP24.16■■□□□ 1.46
HCFC1R1-208ENST00000575214 RASEFQ8IZ41 740 aa24.16■■□□□ 1.46
HCFC1R1-208ENST00000575214 ADGRF4Q8IZF3 695 aa24.16■■□□□ 1.46
HCFC1R1-208ENST00000575214 NEK1Q96PY6 1258 aa24.16■■□□□ 1.46
HCFC1R1-208ENST00000575214 TINF2Q9BSI4 451 aa24.16■■□□□ 1.46
HCFC1R1-208ENST00000575214 CRISPLD2Q9H0B8 497 aa24.16■■□□□ 1.46
HCFC1R1-208ENST00000575214 LY9Q9HBG7 655 aa24.16■■□□□ 1.46
HCFC1R1-208ENST00000575214 GPHNQ9NQX3 736 aaPredicted RBP24.16■■□□□ 1.46
HCFC1R1-208ENST00000575214 KLRF2D3W0D1 207 aa24.15■■□□□ 1.46
HCFC1R1-208ENST00000575214 CAPN2P17655 700 aa24.15■■□□□ 1.46
HCFC1R1-208ENST00000575214 GRM4Q14833 912 aa24.15■■□□□ 1.46
HCFC1R1-208ENST00000575214 NSMFQ6X4W1 530 aa24.15■■□□□ 1.46
HCFC1R1-208ENST00000575214 NFXL1Q6ZNB6 911 aa24.15■■□□□ 1.46
HCFC1R1-208ENST00000575214 TRPV1Q8NER1 839 aa24.15■■□□□ 1.46
HCFC1R1-208ENST00000575214 VAT1LQ9HCJ6 419 aa24.15■■□□□ 1.46
HCFC1R1-208ENST00000575214 MAD2L2Q9UI95 211 aa24.15■■□□□ 1.46
HCFC1R1-208ENST00000575214 PFASO15067 1338 aa24.15■■□□□ 1.46
HCFC1R1-208ENST00000575214 WDR19Q8NEZ3 1342 aa24.15■■□□□ 1.46
HCFC1R1-208ENST00000575214 ZNFX1Q9P2E3 1918 aaKnown RBP24.14■■□□□ 1.46
HCFC1R1-208ENST00000575214 POTEB2H3BUK9 544 aa24.14■■□□□ 1.45
HCFC1R1-208ENST00000575214 SH2B2O14492 632 aaPredicted RBP24.14■■□□□ 1.45
HCFC1R1-208ENST00000575214 FARP2O94887 1054 aaPredicted RBP24.14■■□□□ 1.45
HCFC1R1-208ENST00000575214 KRT32Q14532 448 aa24.14■■□□□ 1.45
HCFC1R1-208ENST00000575214 TSGA10IPQ3SY00 556 aa24.14■■□□□ 1.45
HCFC1R1-208ENST00000575214 PRAMEF19Q5SWL8 479 aa24.14■■□□□ 1.45
HCFC1R1-208ENST00000575214 NUP133Q8WUM0 1156 aa24.14■■□□□ 1.45
HCFC1R1-208ENST00000575214 LRRC2Q9BYS8 371 aa24.14■■□□□ 1.45
HCFC1R1-208ENST00000575214 PALM3A6NDB9 673 aaPredicted RBP24.13■■□□□ 1.45
HCFC1R1-208ENST00000575214 CCDC69A6NI79 296 aa24.13■■□□□ 1.45
HCFC1R1-208ENST00000575214 TROAPQ12815 778 aa24.13■■□□□ 1.45
HCFC1R1-208ENST00000575214 USH1GQ495M9 461 aa24.13■■□□□ 1.45
HCFC1R1-208ENST00000575214 TMTC2Q8N394 836 aa24.13■■□□□ 1.45
HCFC1R1-208ENST00000575214 JMJD4Q9H9V9 463 aa24.13■■□□□ 1.45
HCFC1R1-208ENST00000575214 DDX20Q9UHI6 824 aaKnown RBP24.13■■□□□ 1.45
HCFC1R1-208ENST00000575214 CNTN2Q02246 1040 aa24.12■■□□□ 1.45
HCFC1R1-208ENST00000575214 ADCK5Q3MIX3 580 aa24.12■■□□□ 1.45
HCFC1R1-208ENST00000575214 ZNF467Q7Z7K2 595 aaPredicted RBP24.12■■□□□ 1.45
HCFC1R1-208ENST00000575214 ZNF654Q8IZM8 581 aa24.12■■□□□ 1.45
HCFC1R1-208ENST00000575214 MSL3Q8N5Y2 521 aaKnown RBP24.12■■□□□ 1.45
HCFC1R1-208ENST00000575214 CYP39A1Q9NYL5 469 aa24.12■■□□□ 1.45
HCFC1R1-208ENST00000575214 SYNGAP1Q96PV0 1343 aa24.11■■□□□ 1.45
HCFC1R1-208ENST00000575214 NFIBO00712 420 aa24.11■■□□□ 1.45
HCFC1R1-208ENST00000575214 MSCO60682 206 aa24.11■■□□□ 1.45
HCFC1R1-208ENST00000575214 DDAH1O94760 285 aa24.11■■□□□ 1.45
HCFC1R1-208ENST00000575214 HSPA4P34932 840 aa24.11■■□□□ 1.45
HCFC1R1-208ENST00000575214 QRICH1Q2TAL8 776 aa24.11■■□□□ 1.45
HCFC1R1-208ENST00000575214 LHX8Q68G74 356 aa24.11■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 85.1 ms