RNA–Protein interactions for RNA: ENST00000573989.1

TRAPPC1-206, Transcript of trafficking protein particle complex 1, humanhuman

TSL 2

Gene TRAPPC1, Length 436 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-206ENST00000573989 ICAM1P05362 532 aa14.86□□□□□ -0.03
TRAPPC1-206ENST00000573989 PTPREP23469 700 aa14.86□□□□□ -0.03
TRAPPC1-206ENST00000573989 IRF5Q13568 498 aa14.86□□□□□ -0.03
TRAPPC1-206ENST00000573989 KCTD2Q14681 263 aa14.86□□□□□ -0.03
TRAPPC1-206ENST00000573989 SLC9C1Q4G0N8 1177 aa14.86□□□□□ -0.03
TRAPPC1-206ENST00000573989 CCDC174Q6PII3 467 aa14.86□□□□□ -0.03
TRAPPC1-206ENST00000573989 Q6ZUG5 572 aa14.86□□□□□ -0.03
TRAPPC1-206ENST00000573989 SLAIN1Q8ND83 568 aa14.86□□□□□ -0.03
TRAPPC1-206ENST00000573989 PXYLP1Q8TE99 480 aa14.86□□□□□ -0.03
TRAPPC1-206ENST00000573989 UBA5Q9GZZ9 404 aa14.86□□□□□ -0.03
TRAPPC1-206ENST00000573989 SENP2Q9HC62 589 aa14.86□□□□□ -0.03
TRAPPC1-206ENST00000573989 ZSWIM6Q9HCJ5 1215 aa14.86□□□□□ -0.03
TRAPPC1-206ENST00000573989 CCPG1Q9ULG6 757 aa14.86□□□□□ -0.03
TRAPPC1-206ENST00000573989 PTCH2Q9Y6C5 1203 aa14.86□□□□□ -0.03
TRAPPC1-206ENST00000573989 ZNF236Q9UL36 1845 aa14.85□□□□□ -0.03
TRAPPC1-206ENST00000573989 ADCY3O60266 1144 aa14.85□□□□□ -0.03
TRAPPC1-206ENST00000573989 GRK4P32298 578 aa14.85□□□□□ -0.03
TRAPPC1-206ENST00000573989 RCAN1P53805 252 aa14.85□□□□□ -0.03
TRAPPC1-206ENST00000573989 TRAF1Q13077 416 aa14.85□□□□□ -0.03
TRAPPC1-206ENST00000573989 MAP2K5Q13163 448 aa14.85□□□□□ -0.03
TRAPPC1-206ENST00000573989 GRB14Q14449 540 aa14.85□□□□□ -0.03
TRAPPC1-206ENST00000573989 MORN1Q5T089 497 aa14.85□□□□□ -0.03
TRAPPC1-206ENST00000573989 DPP9Q86TI2 863 aa14.85□□□□□ -0.03
TRAPPC1-206ENST00000573989 ADGRF4Q8IZF3 695 aa14.85□□□□□ -0.03
TRAPPC1-206ENST00000573989 FBXL16Q8N461 479 aa14.85□□□□□ -0.03
TRAPPC1-206ENST00000573989 TCEANC2Q96MN5 208 aa14.85□□□□□ -0.03
TRAPPC1-206ENST00000573989 MMP19Q99542 508 aa14.85□□□□□ -0.03
TRAPPC1-206ENST00000573989 GPHNQ9NQX3 736 aaPredicted RBP14.85□□□□□ -0.03
TRAPPC1-206ENST00000573989 GJD2Q9UKL4 321 aa14.85□□□□□ -0.03
TRAPPC1-206ENST00000573989 NAP1L2Q9ULW6 460 aaPredicted RBP14.85□□□□□ -0.03
TRAPPC1-206ENST00000573989 GABRQQ9UN88 632 aa14.85□□□□□ -0.03
TRAPPC1-206ENST00000573989 HPS5Q9UPZ3 1129 aa14.85□□□□□ -0.03
TRAPPC1-206ENST00000573989 ZBTB43O43298 467 aa14.84□□□□□ -0.03
TRAPPC1-206ENST00000573989 XRCC5P13010 732 aaKnown RBP14.84□□□□□ -0.03
TRAPPC1-206ENST00000573989 ALAS1P13196 640 aa14.84□□□□□ -0.03
TRAPPC1-206ENST00000573989 SMARCA1P28370 1054 aa14.84□□□□□ -0.03
TRAPPC1-206ENST00000573989 UBXN2AP68543 259 aa14.84□□□□□ -0.03
TRAPPC1-206ENST00000573989 PPP2R5BQ15173 497 aa14.84□□□□□ -0.03
TRAPPC1-206ENST00000573989 APOA5Q6Q788 366 aa14.84□□□□□ -0.03
TRAPPC1-206ENST00000573989 MICU3Q86XE3 530 aa14.84□□□□□ -0.03
TRAPPC1-206ENST00000573989 ANKRD35Q8N283 1001 aa14.84□□□□□ -0.03
TRAPPC1-206ENST00000573989 STAG2Q8N3U4 1231 aa14.84□□□□□ -0.03
TRAPPC1-206ENST00000573989 DDX11Q96FC9 970 aa14.84□□□□□ -0.03
TRAPPC1-206ENST00000573989 AGBL1Q96MI9 1066 aa14.84□□□□□ -0.03
TRAPPC1-206ENST00000573989 TRERF1Q96PN7 1200 aa14.84□□□□□ -0.03
TRAPPC1-206ENST00000573989 APBA2Q99767 749 aa14.84□□□□□ -0.03
TRAPPC1-206ENST00000573989 ACAD9Q9H845 621 aa14.84□□□□□ -0.03
TRAPPC1-206ENST00000573989 VAT1LQ9HCJ6 419 aa14.84□□□□□ -0.03
TRAPPC1-206ENST00000573989 RBM28Q9NW13 759 aaKnown RBP14.84□□□□□ -0.03
TRAPPC1-206ENST00000573989 BIN2Q9UBW5 565 aaPredicted RBP14.84□□□□□ -0.03
TRAPPC1-206ENST00000573989 BAZ2BQ9UIF8 2168 aaKnown RBP14.84□□□□□ -0.03
TRAPPC1-206ENST00000573989 PLXNA1Q9UIW2 1896 aa14.83□□□□□ -0.04
TRAPPC1-206ENST00000573989 KLF18A0A0U1RQI7 1052 aa14.83□□□□□ -0.04
TRAPPC1-206ENST00000573989 CCDC196A0A1B0GTZ2 297 aa14.83□□□□□ -0.04
TRAPPC1-206ENST00000573989 SEC24BO95487 1268 aa14.83□□□□□ -0.04
TRAPPC1-206ENST00000573989 CPA1P15085 419 aa14.83□□□□□ -0.04
TRAPPC1-206ENST00000573989 CYP2B6P20813 491 aa14.83□□□□□ -0.04
TRAPPC1-206ENST00000573989 ADORA2AP29274 412 aa14.83□□□□□ -0.04
TRAPPC1-206ENST00000573989 SNAP25P60880 206 aa14.83□□□□□ -0.04
TRAPPC1-206ENST00000573989 COL9A3Q14050 684 aaPredicted RBP14.83□□□□□ -0.04
TRAPPC1-206ENST00000573989 CDC37Q16543 378 aaPredicted RBP14.83□□□□□ -0.04
TRAPPC1-206ENST00000573989 FANCBQ8NB91 859 aa14.83□□□□□ -0.04
TRAPPC1-206ENST00000573989 BRF1Q92994 677 aa14.83□□□□□ -0.04
TRAPPC1-206ENST00000573989 ABHD8Q96I13 439 aa14.83□□□□□ -0.04
TRAPPC1-206ENST00000573989 MYL10Q9BUA6 226 aa14.83□□□□□ -0.04
TRAPPC1-206ENST00000573989 JMJD4Q9H9V9 463 aa14.83□□□□□ -0.04
TRAPPC1-206ENST00000573989 HOMER2Q9NSB8 354 aa14.83□□□□□ -0.04
TRAPPC1-206ENST00000573989 RNF146Q9NTX7 359 aa14.83□□□□□ -0.04
TRAPPC1-206ENST00000573989 PDRG1Q9NUG6 133 aa14.83□□□□□ -0.04
TRAPPC1-206ENST00000573989 ZNF536O15090 1300 aa14.83□□□□□ -0.04
TRAPPC1-206ENST00000573989 HOXC6P09630 235 aa14.82□□□□□ -0.04
TRAPPC1-206ENST00000573989 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.82□□□□□ -0.04
TRAPPC1-206ENST00000573989 FBXO11Q86XK2 927 aa14.82□□□□□ -0.04
TRAPPC1-206ENST00000573989 USP6NLQ92738 828 aa14.82□□□□□ -0.04
TRAPPC1-206ENST00000573989 SPZ1Q9BXG8 430 aa14.82□□□□□ -0.04
TRAPPC1-206ENST00000573989 AGXT2Q9BYV1 514 aa14.82□□□□□ -0.04
TRAPPC1-206ENST00000573989 CPVLQ9H3G5 476 aa14.82□□□□□ -0.04
TRAPPC1-206ENST00000573989 RIOX1Q9H6W3 641 aa14.82□□□□□ -0.04
TRAPPC1-206ENST00000573989 SEC63Q9UGP8 760 aaKnown RBP14.82□□□□□ -0.04
TRAPPC1-206ENST00000573989 RIPK3Q9Y572 518 aa14.82□□□□□ -0.04
TRAPPC1-206ENST00000573989 PFASO15067 1338 aa14.82□□□□□ -0.04
TRAPPC1-206ENST00000573989 SMCHD1A6NHR9 2005 aa14.82□□□□□ -0.04
TRAPPC1-206ENST00000573989 GOLGA8AA7E2F4 631 aa14.81□□□□□ -0.04
TRAPPC1-206ENST00000573989 GOLGA8BA8MQT2 603 aa14.81□□□□□ -0.04
TRAPPC1-206ENST00000573989 ZBTB5O15062 677 aa14.81□□□□□ -0.04
TRAPPC1-206ENST00000573989 HMGCRP04035 888 aa14.81□□□□□ -0.04
TRAPPC1-206ENST00000573989 RXRAP19793 462 aa14.81□□□□□ -0.04
TRAPPC1-206ENST00000573989 METAP2P50579 478 aaKnown RBP eCLIP14.81□□□□□ -0.04
TRAPPC1-206ENST00000573989 APOBRQ0VD83 1088 aa14.81□□□□□ -0.04
TRAPPC1-206ENST00000573989 ANKRD1Q15327 319 aa14.81□□□□□ -0.04
TRAPPC1-206ENST00000573989 RTN1Q16799 776 aa14.81□□□□□ -0.04
TRAPPC1-206ENST00000573989 QRICH1Q2TAL8 776 aa14.81□□□□□ -0.04
TRAPPC1-206ENST00000573989 CCDC144CPQ8IYA2 1237 aa14.81□□□□□ -0.04
TRAPPC1-206ENST00000573989 ARMC5Q96C12 935 aa14.81□□□□□ -0.04
TRAPPC1-206ENST00000573989 RRP36Q96EU6 259 aaKnown RBP14.81□□□□□ -0.04
TRAPPC1-206ENST00000573989 IL17RAQ96F46 866 aa14.81□□□□□ -0.04
TRAPPC1-206ENST00000573989 AMNQ9BXJ7 453 aa14.81□□□□□ -0.04
TRAPPC1-206ENST00000573989 C22orf23Q9BZE7 217 aa14.81□□□□□ -0.04
TRAPPC1-206ENST00000573989 UPF3BQ9BZI7 483 aaKnown RBP14.81□□□□□ -0.04
TRAPPC1-206ENST00000573989 MAF1Q9H063 256 aa14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 86.6 ms