RNA–Protein interactions for RNA: ENST00000573867.1

SCARF1-207, Transcript of scavenger receptor class F member 1, humanhuman

TSL 2

Gene SCARF1, Length 939 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-207ENST00000573867 OLFML2BQ68BL8 750 aa32.55■■■□□ 2.8
SCARF1-207ENST00000573867 DHX30Q7L2E3 1194 aaKnown RBP eCLIP32.55■■■□□ 2.8
SCARF1-207ENST00000573867 CHST3Q7LGC8 479 aa32.55■■■□□ 2.8
SCARF1-207ENST00000573867 MB21D2Q8IYB1 491 aaPredicted RBP32.55■■■□□ 2.8
SCARF1-207ENST00000573867 NCOA7Q8NI08 942 aa32.55■■■□□ 2.8
SCARF1-207ENST00000573867 MAML3Q96JK9 1138 aa32.55■■■□□ 2.8
SCARF1-207ENST00000573867 CRISPLD2Q9H0B8 497 aa32.55■■■□□ 2.8
SCARF1-207ENST00000573867 CPVLQ9H3G5 476 aa32.55■■■□□ 2.8
SCARF1-207ENST00000573867 SENP2Q9HC62 589 aa32.55■■■□□ 2.8
SCARF1-207ENST00000573867 ZNFX1Q9P2E3 1918 aaKnown RBP32.54■■■□□ 2.8
SCARF1-207ENST00000573867 MFSD14CQ5VZR4 134 aa32.54■■■□□ 2.8
SCARF1-207ENST00000573867 CREB3L3Q68CJ9 461 aa32.54■■■□□ 2.8
SCARF1-207ENST00000573867 TRPV1Q8NER1 839 aa32.54■■■□□ 2.8
SCARF1-207ENST00000573867 HOMER2Q9NSB8 354 aa32.54■■■□□ 2.8
SCARF1-207ENST00000573867 IFIT1BQ5T764 474 aaKnown RBP32.53■■■□□ 2.8
SCARF1-207ENST00000573867 UBE2Q1Q7Z7E8 422 aa32.53■■■□□ 2.8
SCARF1-207ENST00000573867 RALYLQ86SE5 291 aaKnown RBP32.53■■■□□ 2.8
SCARF1-207ENST00000573867 DNAJC25-GNG10A0A024R161 153 aa32.52■■■□□ 2.8
SCARF1-207ENST00000573867 CHST13Q8NET6 341 aa32.52■■■□□ 2.8
SCARF1-207ENST00000573867 UBA5Q9GZZ9 404 aa32.51■■■□□ 2.79
SCARF1-207ENST00000573867 RNF146Q9NTX7 359 aa32.51■■■□□ 2.79
SCARF1-207ENST00000573867 IFIT3O14879 490 aaKnown RBP32.5■■■□□ 2.79
SCARF1-207ENST00000573867 MUM1L1Q5H9M0 696 aa32.5■■■□□ 2.79
SCARF1-207ENST00000573867 GPATCH4Q5T3I0 446 aaKnown RBP32.5■■■□□ 2.79
SCARF1-207ENST00000573867 CASC1Q6TDU7 716 aa32.5■■■□□ 2.79
SCARF1-207ENST00000573867 FGD4Q96M96 766 aa32.5■■■□□ 2.79
SCARF1-207ENST00000573867 SLC5A4Q9NY91 659 aa32.5■■■□□ 2.79
SCARF1-207ENST00000573867 PLXNA1Q9UIW2 1896 aa32.49■■■□□ 2.79
SCARF1-207ENST00000573867 TFRCP02786 760 aaKnown RBP32.49■■■□□ 2.79
SCARF1-207ENST00000573867 ICAM1P05362 532 aa32.49■■■□□ 2.79
SCARF1-207ENST00000573867 ALAS1P13196 640 aa32.49■■■□□ 2.79
SCARF1-207ENST00000573867 CYBAP13498 195 aa32.49■■■□□ 2.79
SCARF1-207ENST00000573867 GPHNQ9NQX3 736 aaPredicted RBP32.49■■■□□ 2.79
SCARF1-207ENST00000573867 FBXO40Q9UH90 709 aa32.49■■■□□ 2.79
SCARF1-207ENST00000573867 CCPG1Q9ULG6 757 aa32.49■■■□□ 2.79
SCARF1-207ENST00000573867 DIS3Q9Y2L1 958 aaKnown RBP32.49■■■□□ 2.79
SCARF1-207ENST00000573867 PRAMEF19Q5SWL8 479 aa32.48■■■□□ 2.79
SCARF1-207ENST00000573867 LHX8Q68G74 356 aa32.48■■■□□ 2.79
SCARF1-207ENST00000573867 IGDCC4Q8TDY8 1250 aa32.48■■■□□ 2.79
SCARF1-207ENST00000573867 TRERF1Q96PN7 1200 aa32.48■■■□□ 2.79
SCARF1-207ENST00000573867 ACAD9Q9H845 621 aa32.48■■■□□ 2.79
SCARF1-207ENST00000573867 TKFCQ3LXA3 575 aa32.47■■■□□ 2.79
SCARF1-207ENST00000573867 ASPRV1Q53RT3 343 aa32.47■■■□□ 2.79
SCARF1-207ENST00000573867 ANKRD35Q8N283 1001 aa32.47■■■□□ 2.79
SCARF1-207ENST00000573867 STAG2Q8N3U4 1231 aa32.47■■■□□ 2.79
SCARF1-207ENST00000573867 DDX11Q96FC9 970 aa32.47■■■□□ 2.79
SCARF1-207ENST00000573867 A1CFQ9NQ94 594 aaKnown RBP32.47■■■□□ 2.79
SCARF1-207ENST00000573867 SMCHD1A6NHR9 2005 aa32.46■■■□□ 2.79
SCARF1-207ENST00000573867 MNX1P50219 401 aaPredicted RBP32.46■■■□□ 2.79
SCARF1-207ENST00000573867 OGDHLQ9ULD0 1010 aa32.46■■■□□ 2.79
SCARF1-207ENST00000573867 FARP2O94887 1054 aaPredicted RBP32.45■■■□□ 2.79
SCARF1-207ENST00000573867 TMEM67Q5HYA8 995 aa32.45■■■□□ 2.79
SCARF1-207ENST00000573867 RASEFQ8IZ41 740 aa32.45■■■□□ 2.79
SCARF1-207ENST00000573867 TINF2Q9BSI4 451 aa32.45■■■□□ 2.79
SCARF1-207ENST00000573867 PARP1P09874 1014 aaKnown RBP32.44■■■□□ 2.78
SCARF1-207ENST00000573867 WTAPQ15007 396 aa32.44■■■□□ 2.78
SCARF1-207ENST00000573867 DIS3LQ8TF46 1054 aaKnown RBP32.44■■■□□ 2.78
SCARF1-207ENST00000573867 MAD2L2Q9UI95 211 aa32.44■■■□□ 2.78
SCARF1-207ENST00000573867 PRC1O43663 620 aa32.43■■■□□ 2.78
SCARF1-207ENST00000573867 CNTN2Q02246 1040 aa32.43■■■□□ 2.78
SCARF1-207ENST00000573867 ADGRF4Q8IZF3 695 aa32.43■■■□□ 2.78
SCARF1-207ENST00000573867 LY9Q9HBG7 655 aa32.43■■■□□ 2.78
SCARF1-207ENST00000573867 FRMPD3Q5JV73 1810 aa32.42■■■□□ 2.78
SCARF1-207ENST00000573867 ERICH2A1L162 156 aa32.42■■■□□ 2.78
SCARF1-207ENST00000573867 CNGA1P29973 690 aa32.42■■■□□ 2.78
SCARF1-207ENST00000573867 SLC35G1Q2M3R5 365 aa32.42■■■□□ 2.78
SCARF1-207ENST00000573867 FAM133AQ8N9E0 248 aa32.42■■■□□ 2.78
SCARF1-207ENST00000573867 DDX20Q9UHI6 824 aaKnown RBP32.42■■■□□ 2.78
SCARF1-207ENST00000573867 PALM3A6NDB9 673 aaPredicted RBP32.41■■■□□ 2.78
SCARF1-207ENST00000573867 NFIBO00712 420 aa32.41■■■□□ 2.78
SCARF1-207ENST00000573867 TROAPQ12815 778 aa32.41■■■□□ 2.78
SCARF1-207ENST00000573867 SART3Q15020 963 aaKnown RBP32.41■■■□□ 2.78
SCARF1-207ENST00000573867 CLEC4DQ8WXI8 215 aa32.41■■■□□ 2.78
SCARF1-207ENST00000573867 JMJD4Q9H9V9 463 aa32.41■■■□□ 2.78
SCARF1-207ENST00000573867 ASTN1O14525 1302 aa32.41■■■□□ 2.78
SCARF1-207ENST00000573867 WDR19Q8NEZ3 1342 aa32.41■■■□□ 2.78
SCARF1-207ENST00000573867 SNAI1O95863 264 aaPredicted RBP32.4■■■□□ 2.78
SCARF1-207ENST00000573867 GRM4Q14833 912 aa32.4■■■□□ 2.78
SCARF1-207ENST00000573867 CDC37Q16543 378 aaPredicted RBP32.4■■■□□ 2.78
SCARF1-207ENST00000573867 MAMDC4Q6UXC1 1216 aa32.4■■■□□ 2.78
SCARF1-207ENST00000573867 CYP39A1Q9NYL5 469 aa32.4■■■□□ 2.78
SCARF1-207ENST00000573867 SOWAHBA6NEL2 793 aa32.39■■■□□ 2.78
SCARF1-207ENST00000573867 SH2B2O14492 632 aaPredicted RBP32.39■■■□□ 2.78
SCARF1-207ENST00000573867 CAPN2P17655 700 aa32.39■■■□□ 2.78
SCARF1-207ENST00000573867 MCM5P33992 734 aa32.39■■■□□ 2.78
SCARF1-207ENST00000573867 ADCK5Q3MIX3 580 aa32.39■■■□□ 2.78
SCARF1-207ENST00000573867 ANO1Q5XXA6 986 aa32.39■■■□□ 2.78
SCARF1-207ENST00000573867 ZNF467Q7Z7K2 595 aaPredicted RBP32.39■■■□□ 2.78
SCARF1-207ENST00000573867 PAWRQ96IZ0 340 aaKnown RBP32.39■■■□□ 2.78
SCARF1-207ENST00000573867 PURBQ96QR8 312 aaKnown RBP32.39■■■□□ 2.78
SCARF1-207ENST00000573867 LCTP09848 1927 aa32.39■■■□□ 2.78
SCARF1-207ENST00000573867 PDE4DIPQ5VU43 2346 aa32.38■■■□□ 2.77
SCARF1-207ENST00000573867 KLRF2D3W0D1 207 aa32.38■■■□□ 2.77
SCARF1-207ENST00000573867 POTEB2H3BUK9 544 aa32.38■■■□□ 2.77
SCARF1-207ENST00000573867 ZNF865P0CJ78 1059 aaPredicted RBP32.38■■■□□ 2.77
SCARF1-207ENST00000573867 TSGA10IPQ3SY00 556 aa32.38■■■□□ 2.77
SCARF1-207ENST00000573867 RNF20Q5VTR2 975 aa32.38■■■□□ 2.77
SCARF1-207ENST00000573867 NSMFQ6X4W1 530 aa32.38■■■□□ 2.77
SCARF1-207ENST00000573867 ANKLE1Q8NAG6 615 aa32.38■■■□□ 2.77
SCARF1-207ENST00000573867 MTA3Q9BTC8 594 aa32.38■■■□□ 2.77
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms