RNA–Protein interactions for RNA: ENST00000571558.5

RPAIN-209, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,423 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-209ENST00000571558 PSMA5P28066 241 aa16.13■□□□□ 0.17
RPAIN-209ENST00000571558 RUFY3Q7L099 469 aa16.13■□□□□ 0.17
RPAIN-209ENST00000571558 SH3RF1Q7Z6J0 888 aa16.13■□□□□ 0.17
RPAIN-209ENST00000571558 SLC44A5Q8NCS7 719 aa16.13■□□□□ 0.17
RPAIN-209ENST00000571558 ACER1Q8TDN7 264 aa16.13■□□□□ 0.17
RPAIN-209ENST00000571558 CNNM2Q9H8M5 875 aa16.13■□□□□ 0.17
RPAIN-209ENST00000571558 PHF24Q9UPV7 400 aa16.13■□□□□ 0.17
RPAIN-209ENST00000571558 SLC3A2P08195 630 aaKnown RBP16.12■□□□□ 0.17
RPAIN-209ENST00000571558 HMGB1P09429 215 aaKnown RBP16.12■□□□□ 0.17
RPAIN-209ENST00000571558 COL9A1P20849 921 aa16.12■□□□□ 0.17
RPAIN-209ENST00000571558 RPS6KB1P23443 525 aa16.12■□□□□ 0.17
RPAIN-209ENST00000571558 CDK8P49336 464 aa16.12■□□□□ 0.17
RPAIN-209ENST00000571558 EXOSC10Q01780 885 aaKnown RBP16.12■□□□□ 0.17
RPAIN-209ENST00000571558 RNF180Q86T96 592 aa16.12■□□□□ 0.17
RPAIN-209ENST00000571558 STK11IPQ8N1F8 1099 aa16.12■□□□□ 0.17
RPAIN-209ENST00000571558 NCOA7Q8NI08 942 aa16.12■□□□□ 0.17
RPAIN-209ENST00000571558 TTC14Q96N46 770 aa16.12■□□□□ 0.17
RPAIN-209ENST00000571558 RAG1P15918 1043 aa16.11■□□□□ 0.17
RPAIN-209ENST00000571558 ERCC3P19447 782 aa16.11■□□□□ 0.17
RPAIN-209ENST00000571558 RASA1P20936 1047 aa16.11■□□□□ 0.17
RPAIN-209ENST00000571558 ANTXR2P58335 489 aa16.11■□□□□ 0.17
RPAIN-209ENST00000571558 PDE4BQ07343 736 aa16.11■□□□□ 0.17
RPAIN-209ENST00000571558 BLOC1S2Q6QNY1 142 aa16.11■□□□□ 0.17
RPAIN-209ENST00000571558 CYB5R4Q7L1T6 521 aa16.11■□□□□ 0.17
RPAIN-209ENST00000571558 DHX32Q7L7V1 743 aaKnown RBP16.11■□□□□ 0.17
RPAIN-209ENST00000571558 ATXN2LQ8WWM7 1075 aaKnown RBP16.11■□□□□ 0.17
RPAIN-209ENST00000571558 TOX2Q96NM4 488 aa16.11■□□□□ 0.17
RPAIN-209ENST00000571558 KRT23Q9C075 422 aa16.11■□□□□ 0.17
RPAIN-209ENST00000571558 SWAP70Q9UH65 585 aa16.11■□□□□ 0.17
RPAIN-209ENST00000571558 CYP46A1Q9Y6A2 500 aa16.11■□□□□ 0.17
RPAIN-209ENST00000571558 B4E1Z4 1266 aa16.11■□□□□ 0.17
RPAIN-209ENST00000571558 COBLO75128 1261 aa16.11■□□□□ 0.17
RPAIN-209ENST00000571558 PRDM1O75626 825 aa16.11■□□□□ 0.17
RPAIN-209ENST00000571558 MYCNP04198 464 aaPredicted RBP16.11■□□□□ 0.17
RPAIN-209ENST00000571558 RARBP10826 455 aa16.11■□□□□ 0.17
RPAIN-209ENST00000571558 DNAJB2P25686 324 aa16.11■□□□□ 0.17
RPAIN-209ENST00000571558 SHMT1P34896 483 aa16.11■□□□□ 0.17
RPAIN-209ENST00000571558 NT5C2P49902 561 aa16.11■□□□□ 0.17
RPAIN-209ENST00000571558 NEK4P51957 841 aa16.11■□□□□ 0.17
RPAIN-209ENST00000571558 FPGSQ05932 587 aa16.11■□□□□ 0.17
RPAIN-209ENST00000571558 TRDNQ13061 729 aa16.11■□□□□ 0.17
RPAIN-209ENST00000571558 GRIN2CQ14957 1233 aa16.11■□□□□ 0.17
RPAIN-209ENST00000571558 ANO1Q5XXA6 986 aa16.11■□□□□ 0.17
RPAIN-209ENST00000571558 RALYLQ86SE5 291 aaKnown RBP16.11■□□□□ 0.17
RPAIN-209ENST00000571558 IL27Q8NEV9 243 aa16.11■□□□□ 0.17
RPAIN-209ENST00000571558 FERMT2Q96AC1 680 aa16.11■□□□□ 0.17
RPAIN-209ENST00000571558 MAML3Q96JK9 1138 aa16.11■□□□□ 0.17
RPAIN-209ENST00000571558 ALDH8A1Q9H2A2 487 aaPredicted RBP16.11■□□□□ 0.17
RPAIN-209ENST00000571558 XPNPEP3Q9NQH7 507 aa16.11■□□□□ 0.17
RPAIN-209ENST00000571558 ZSWIM5Q9P217 1185 aa16.11■□□□□ 0.17
RPAIN-209ENST00000571558 WDR19Q8NEZ3 1342 aa16.1■□□□□ 0.17
RPAIN-209ENST00000571558 KDM4AO75164 1064 aa16.1■□□□□ 0.17
RPAIN-209ENST00000571558 CD2BP2O95400 341 aaKnown RBP16.1■□□□□ 0.17
RPAIN-209ENST00000571558 FCER1AP12319 257 aa16.1■□□□□ 0.17
RPAIN-209ENST00000571558 MCM5P33992 734 aa16.1■□□□□ 0.17
RPAIN-209ENST00000571558 FAM47AQ5JRC9 791 aa16.1■□□□□ 0.17
RPAIN-209ENST00000571558 ANKRD33Q7Z3H0 272 aa16.1■□□□□ 0.17
RPAIN-209ENST00000571558 FBXL16Q8N461 479 aa16.1■□□□□ 0.17
RPAIN-209ENST00000571558 ZNF576Q9H609 170 aa16.1■□□□□ 0.17
RPAIN-209ENST00000571558 ZNF287Q9HBT7 754 aa16.1■□□□□ 0.17
RPAIN-209ENST00000571558 DIS3Q9Y2L1 958 aaKnown RBP16.1■□□□□ 0.17
RPAIN-209ENST00000571558 PRC1O43663 620 aa16.09■□□□□ 0.17
RPAIN-209ENST00000571558 SLC25A27O95847 323 aa16.09■□□□□ 0.17
RPAIN-209ENST00000571558 ITGB8P26012 769 aa16.09■□□□□ 0.17
RPAIN-209ENST00000571558 GUCY1A2P33402 732 aa16.09■□□□□ 0.17
RPAIN-209ENST00000571558 RRP12Q5JTH9 1297 aaKnown RBP16.09■□□□□ 0.17
RPAIN-209ENST00000571558 CCDC174Q6PII3 467 aa16.09■□□□□ 0.17
RPAIN-209ENST00000571558 ESR2Q92731 530 aa16.09■□□□□ 0.17
RPAIN-209ENST00000571558 TCEANC2Q96MN5 208 aa16.09■□□□□ 0.17
RPAIN-209ENST00000571558 TSEN34Q9BSV6 310 aaKnown RBP16.09■□□□□ 0.17
RPAIN-209ENST00000571558 AGXT2Q9BYV1 514 aa16.09■□□□□ 0.17
RPAIN-209ENST00000571558 TANGO6Q9C0B7 1094 aa16.09■□□□□ 0.17
RPAIN-209ENST00000571558 MKNK2Q9HBH9 465 aa16.09■□□□□ 0.17
RPAIN-209ENST00000571558 TMEM39AQ9NV64 488 aa16.09■□□□□ 0.17
RPAIN-209ENST00000571558 DCDC2CA8MYV0 355 aa16.08■□□□□ 0.16
RPAIN-209ENST00000571558 DSG3P32926 999 aa16.08■□□□□ 0.16
RPAIN-209ENST00000571558 EPHB4P54760 987 aa16.08■□□□□ 0.16
RPAIN-209ENST00000571558 SEPT2Q15019 361 aa16.08■□□□□ 0.16
RPAIN-209ENST00000571558 PRAMEF19Q5SWL8 479 aa16.08■□□□□ 0.16
RPAIN-209ENST00000571558 CHST3Q7LGC8 479 aa16.08■□□□□ 0.16
RPAIN-209ENST00000571558 NCAPG2Q86XI2 1143 aa16.08■□□□□ 0.16
RPAIN-209ENST00000571558 NUP133Q8WUM0 1156 aa16.08■□□□□ 0.16
RPAIN-209ENST00000571558 GAS2L1Q99501 681 aaPredicted RBP16.08■□□□□ 0.16
RPAIN-209ENST00000571558 TOMM22Q9NS69 142 aa16.08■□□□□ 0.16
RPAIN-209ENST00000571558 PDRG1Q9NUG6 133 aa16.08■□□□□ 0.16
RPAIN-209ENST00000571558 BDP1A6H8Y1 2624 aa16.07■□□□□ 0.16
RPAIN-209ENST00000571558 PLIN4Q96Q06 1357 aa16.07■□□□□ 0.16
RPAIN-209ENST00000571558 RANBP6O60518 1105 aaKnown RBP16.07■□□□□ 0.16
RPAIN-209ENST00000571558 TOB2Q14106 344 aaPredicted RBP16.07■□□□□ 0.16
RPAIN-209ENST00000571558 IGDCC4Q8TDY8 1250 aa16.07■□□□□ 0.16
RPAIN-209ENST00000571558 SNX21Q969T3 373 aa16.07■□□□□ 0.16
RPAIN-209ENST00000571558 TIFAQ96CG3 184 aa16.07■□□□□ 0.16
RPAIN-209ENST00000571558 MTA3Q9BTC8 594 aa16.07■□□□□ 0.16
RPAIN-209ENST00000571558 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.07■□□□□ 0.16
RPAIN-209ENST00000571558 SH2D4AQ9H788 454 aa16.07■□□□□ 0.16
RPAIN-209ENST00000571558 A0A1W2PQ45 241 aaPredicted RBP16.06■□□□□ 0.16
RPAIN-209ENST00000571558 A0A1W2PQY0 241 aa16.06■□□□□ 0.16
RPAIN-209ENST00000571558 A0A1W2PRG0 241 aa16.06■□□□□ 0.16
RPAIN-209ENST00000571558 ST18O60284 1047 aa16.06■□□□□ 0.16
RPAIN-209ENST00000571558 PQBP1O60828 265 aaKnown RBP16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms