RNA–Protein interactions for RNA: ENST00000571277.1

LITAF-206, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 4

Gene LITAF, Length 587 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-206ENST00000571277 KCTD1Q719H9 257 aa13.44□□□□□ -0.26
LITAF-206ENST00000571277 CHD1LQ86WJ1 897 aa13.44□□□□□ -0.26
LITAF-206ENST00000571277 ANKRD35Q8N283 1001 aa13.44□□□□□ -0.26
LITAF-206ENST00000571277 CHURC1Q8WUH1 139 aa13.44□□□□□ -0.26
LITAF-206ENST00000571277 CHMP4CQ96CF2 233 aa13.44□□□□□ -0.26
LITAF-206ENST00000571277 AGBL1Q96MI9 1066 aa13.44□□□□□ -0.26
LITAF-206ENST00000571277 RWDD1Q9H446 243 aaPredicted RBP13.44□□□□□ -0.26
LITAF-206ENST00000571277 OSBPL3Q9H4L5 887 aa13.44□□□□□ -0.26
LITAF-206ENST00000571277 PDLIM7Q9NR12 457 aa13.44□□□□□ -0.26
LITAF-206ENST00000571277 LCTP09848 1927 aa13.44□□□□□ -0.26
LITAF-206ENST00000571277 CCDC171Q6TFL3 1326 aa13.43□□□□□ -0.26
LITAF-206ENST00000571277 SYNRGQ9UMZ2 1314 aa13.43□□□□□ -0.26
LITAF-206ENST00000571277 LRRC37A2A6NM11 1700 aa13.43□□□□□ -0.26
LITAF-206ENST00000571277 RANBP6O60518 1105 aaKnown RBP13.43□□□□□ -0.26
LITAF-206ENST00000571277 B4GALNT3Q6L9W6 998 aa13.43□□□□□ -0.26
LITAF-206ENST00000571277 SH3RF1Q7Z6J0 888 aa13.43□□□□□ -0.26
LITAF-206ENST00000571277 RNF180Q86T96 592 aa13.43□□□□□ -0.26
LITAF-206ENST00000571277 FAM133AQ8N9E0 248 aa13.43□□□□□ -0.26
LITAF-206ENST00000571277 KLHDC9Q8NEP7 349 aa13.43□□□□□ -0.26
LITAF-206ENST00000571277 EXOC6Q8TAG9 804 aa13.43□□□□□ -0.26
LITAF-206ENST00000571277 KATNBL1Q9H079 304 aa13.43□□□□□ -0.26
LITAF-206ENST00000571277 HOMER2Q9NSB8 354 aa13.43□□□□□ -0.26
LITAF-206ENST00000571277 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.43□□□□□ -0.26
LITAF-206ENST00000571277 FAM184BQ9ULE4 1060 aa13.43□□□□□ -0.26
LITAF-206ENST00000571277 PRR12Q9ULL5 1215 aa13.43□□□□□ -0.26
LITAF-206ENST00000571277 CTDP1Q9Y5B0 961 aaPredicted RBP13.43□□□□□ -0.26
LITAF-206ENST00000571277 COL6A3P12111 3177 aa13.43□□□□□ -0.26
LITAF-206ENST00000571277 ASTN1O14525 1302 aa13.42□□□□□ -0.26
LITAF-206ENST00000571277 LAMA4Q16363 1823 aa13.42□□□□□ -0.26
LITAF-206ENST00000571277 A0A1W2PQ45 241 aaPredicted RBP13.42□□□□□ -0.26
LITAF-206ENST00000571277 A0A1W2PQY0 241 aa13.42□□□□□ -0.26
LITAF-206ENST00000571277 TRIM43BA6NCK2 446 aa13.42□□□□□ -0.26
LITAF-206ENST00000571277 MYADML2A6NDP7 307 aa13.42□□□□□ -0.26
LITAF-206ENST00000571277 SNAP25P60880 206 aa13.42□□□□□ -0.26
LITAF-206ENST00000571277 IRX5P78411 483 aaPredicted RBP13.42□□□□□ -0.26
LITAF-206ENST00000571277 TLE2Q04725 743 aa13.42□□□□□ -0.26
LITAF-206ENST00000571277 ACVR2BQ13705 512 aa13.42□□□□□ -0.26
LITAF-206ENST00000571277 ARMCX2Q7L311 632 aa13.42□□□□□ -0.26
LITAF-206ENST00000571277 CCDC144CPQ8IYA2 1237 aa13.42□□□□□ -0.26
LITAF-206ENST00000571277 TRIM43Q96BQ3 446 aaPredicted RBP13.42□□□□□ -0.26
LITAF-206ENST00000571277 LBHD1Q9BQE6 289 aaPredicted RBP13.42□□□□□ -0.26
LITAF-206ENST00000571277 TSEN34Q9BSV6 310 aaKnown RBP13.42□□□□□ -0.26
LITAF-206ENST00000571277 ABHD16BQ9H3Z7 469 aa13.42□□□□□ -0.26
LITAF-206ENST00000571277 ACAD9Q9H845 621 aa13.42□□□□□ -0.26
LITAF-206ENST00000571277 A1CFQ9NQ94 594 aaKnown RBP13.42□□□□□ -0.26
LITAF-206ENST00000571277 RNF146Q9NTX7 359 aa13.42□□□□□ -0.26
LITAF-206ENST00000571277 TCP11L1Q9NUJ3 509 aa13.42□□□□□ -0.26
LITAF-206ENST00000571277 ZHX1Q9UKY1 873 aaPredicted RBP13.42□□□□□ -0.26
LITAF-206ENST00000571277 ISY1Q9ULR0 285 aaKnown RBP13.42□□□□□ -0.26
LITAF-206ENST00000571277 LAMA2P24043 3122 aaKnown RBP13.41□□□□□ -0.26
LITAF-206ENST00000571277 SOWAHBA6NEL2 793 aa13.41□□□□□ -0.26
LITAF-206ENST00000571277 TRIM6-TRIM34B2RNG4 842 aa13.41□□□□□ -0.26
LITAF-206ENST00000571277 DUSP11O75319 330 aaKnown RBP13.41□□□□□ -0.26
LITAF-206ENST00000571277 SDSP20132 328 aa13.41□□□□□ -0.26
LITAF-206ENST00000571277 ITGB8P26012 769 aa13.41□□□□□ -0.26
LITAF-206ENST00000571277 CST5P28325 142 aaPredicted RBP13.41□□□□□ -0.26
LITAF-206ENST00000571277 ACLYP53396 1101 aa13.41□□□□□ -0.26
LITAF-206ENST00000571277 HAND2P61296 217 aa13.41□□□□□ -0.26
LITAF-206ENST00000571277 IKQ13123 557 aaPredicted RBP13.41□□□□□ -0.26
LITAF-206ENST00000571277 TKFCQ3LXA3 575 aa13.41□□□□□ -0.26
LITAF-206ENST00000571277 CCDC144BQ3MJ40 725 aa13.41□□□□□ -0.26
LITAF-206ENST00000571277 MUM1L1Q5H9M0 696 aa13.41□□□□□ -0.26
LITAF-206ENST00000571277 TTBK2Q6IQ55 1244 aa13.41□□□□□ -0.26
LITAF-206ENST00000571277 BTNL9Q6UXG8 535 aa13.41□□□□□ -0.26
LITAF-206ENST00000571277 Q7L0L9 218 aa13.41□□□□□ -0.26
LITAF-206ENST00000571277 TBC1D10CQ8IV04 446 aa13.41□□□□□ -0.26
LITAF-206ENST00000571277 DCAF4Q8WV16 495 aa13.41□□□□□ -0.26
LITAF-206ENST00000571277 RILPL2Q969X0 211 aa13.41□□□□□ -0.26
LITAF-206ENST00000571277 TRERF1Q96PN7 1200 aa13.41□□□□□ -0.26
LITAF-206ENST00000571277 TMEM47Q9BQJ4 181 aa13.41□□□□□ -0.26
LITAF-206ENST00000571277 UPF3AQ9H1J1 476 aaKnown RBP13.41□□□□□ -0.26
LITAF-206ENST00000571277 PRKAG2Q9UGJ0 569 aa13.41□□□□□ -0.26
LITAF-206ENST00000571277 POTEB2H3BUK9 544 aa13.4□□□□□ -0.26
LITAF-206ENST00000571277 CTAGE5O15320 804 aa13.4□□□□□ -0.26
LITAF-206ENST00000571277 TOP1P11387 765 aaKnown RBP13.4□□□□□ -0.26
LITAF-206ENST00000571277 KCNA10Q16322 511 aa13.4□□□□□ -0.26
LITAF-206ENST00000571277 RRP12Q5JTH9 1297 aaKnown RBP13.4□□□□□ -0.26
LITAF-206ENST00000571277 AKNAD1Q5T1N1 836 aa13.4□□□□□ -0.26
LITAF-206ENST00000571277 DEFB123Q8N688 67 aa13.4□□□□□ -0.26
LITAF-206ENST00000571277 BADQ92934 168 aa13.4□□□□□ -0.26
LITAF-206ENST00000571277 RANBP17Q9H2T7 1088 aaKnown RBP13.4□□□□□ -0.26
LITAF-206ENST00000571277 PRDM5Q9NQX1 630 aaPredicted RBP13.4□□□□□ -0.26
LITAF-206ENST00000571277 TOMM22Q9NS69 142 aa13.4□□□□□ -0.26
LITAF-206ENST00000571277 MTMR7Q9Y216 660 aa13.4□□□□□ -0.26
LITAF-206ENST00000571277 MOXD2PA6NHM9 499 aa13.39□□□□□ -0.27
LITAF-206ENST00000571277 ICAM1P05362 532 aa13.39□□□□□ -0.27
LITAF-206ENST00000571277 PDHBP11177 359 aa13.39□□□□□ -0.27
LITAF-206ENST00000571277 ALAS1P13196 640 aa13.39□□□□□ -0.27
LITAF-206ENST00000571277 SLC16A2P36021 539 aa13.39□□□□□ -0.27
LITAF-206ENST00000571277 GJA9P57773 515 aa13.39□□□□□ -0.27
LITAF-206ENST00000571277 NKX3-2P78367 333 aa13.39□□□□□ -0.27
LITAF-206ENST00000571277 SHHQ15465 462 aa13.39□□□□□ -0.27
LITAF-206ENST00000571277 CCDC96Q2M329 555 aa13.39□□□□□ -0.27
LITAF-206ENST00000571277 CCDC174Q6PII3 467 aa13.39□□□□□ -0.27
LITAF-206ENST00000571277 ANKRD33Q7Z3H0 272 aa13.39□□□□□ -0.27
LITAF-206ENST00000571277 MTMR10Q9NXD2 777 aa13.39□□□□□ -0.27
LITAF-206ENST00000571277 CYP39A1Q9NYL5 469 aa13.39□□□□□ -0.27
LITAF-206ENST00000571277 DDX49Q9Y6V7 483 aaKnown RBP13.39□□□□□ -0.27
LITAF-206ENST00000571277 NEDD4P46934 1319 aa13.39□□□□□ -0.27
LITAF-206ENST00000571277 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms