RNA–Protein interactions for RNA: ENST00000570758.1

CHD3-212, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 174 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-212ENST00000570758 CHRDL2Q6WN34 429 aa6.37□□□□□ -1.39
CHD3-212ENST00000570758 CHST13Q8NET6 341 aa6.37□□□□□ -1.39
CHD3-212ENST00000570758 ESR2Q92731 530 aa6.37□□□□□ -1.39
CHD3-212ENST00000570758 LENG1Q96BZ8 264 aaPredicted RBP6.37□□□□□ -1.39
CHD3-212ENST00000570758 TTC14Q96N46 770 aa6.37□□□□□ -1.39
CHD3-212ENST00000570758 TINF2Q9BSI4 451 aa6.37□□□□□ -1.39
CHD3-212ENST00000570758 RANBP17Q9H2T7 1088 aaKnown RBP6.37□□□□□ -1.39
CHD3-212ENST00000570758 PRO3102Q9H379 93 aa6.37□□□□□ -1.39
CHD3-212ENST00000570758 RNF41Q9H4P4 317 aaPredicted RBP6.37□□□□□ -1.39
CHD3-212ENST00000570758 A1CFQ9NQ94 594 aaKnown RBP6.37□□□□□ -1.39
CHD3-212ENST00000570758 RNF146Q9NTX7 359 aa6.37□□□□□ -1.39
CHD3-212ENST00000570758 ZSWIM5Q9P217 1185 aa6.37□□□□□ -1.39
CHD3-212ENST00000570758 ZMYND8Q9ULU4 1186 aaPredicted RBP6.37□□□□□ -1.39
CHD3-212ENST00000570758 NR2E3Q9Y5X4 410 aa6.37□□□□□ -1.39
CHD3-212ENST00000570758 TAF6LQ9Y6J9 622 aa6.37□□□□□ -1.39
CHD3-212ENST00000570758 MKI67P46013 3256 aaKnown RBP6.37□□□□□ -1.39
CHD3-212ENST00000570758 PLXNA1Q9UIW2 1896 aa6.36□□□□□ -1.39
CHD3-212ENST00000570758 ASTN1O14525 1302 aa6.36□□□□□ -1.39
CHD3-212ENST00000570758 RAD50Q92878 1312 aa6.36□□□□□ -1.39
CHD3-212ENST00000570758 SYNGAP1Q96PV0 1343 aa6.36□□□□□ -1.39
CHD3-212ENST00000570758 SOWAHBA6NEL2 793 aa6.36□□□□□ -1.39
CHD3-212ENST00000570758 POTEB2H3BUK9 544 aa6.36□□□□□ -1.39
CHD3-212ENST00000570758 DNM1LO00429 736 aa6.36□□□□□ -1.39
CHD3-212ENST00000570758 SGSM2O43147 1006 aa6.36□□□□□ -1.39
CHD3-212ENST00000570758 SNHG28P0DPA3 235 aa6.36□□□□□ -1.39
CHD3-212ENST00000570758 ALAS1P13196 640 aa6.36□□□□□ -1.39
CHD3-212ENST00000570758 SYN1P17600 705 aa6.36□□□□□ -1.39
CHD3-212ENST00000570758 IRX5P78411 483 aaPredicted RBP6.36□□□□□ -1.39
CHD3-212ENST00000570758 ZNF543Q08ER8 600 aa6.36□□□□□ -1.39
CHD3-212ENST00000570758 LRRC41Q15345 812 aa6.36□□□□□ -1.39
CHD3-212ENST00000570758 IMMTQ16891 758 aaKnown RBP6.36□□□□□ -1.39
CHD3-212ENST00000570758 TKFCQ3LXA3 575 aa6.36□□□□□ -1.39
CHD3-212ENST00000570758 MAMDC4Q6UXC1 1216 aa6.36□□□□□ -1.39
CHD3-212ENST00000570758 CYB5R4Q7L1T6 521 aa6.36□□□□□ -1.39
CHD3-212ENST00000570758 ZNF467Q7Z7K2 595 aaPredicted RBP6.36□□□□□ -1.39
CHD3-212ENST00000570758 DGKHQ86XP1 1220 aa6.36□□□□□ -1.39
CHD3-212ENST00000570758 ANKRD35Q8N283 1001 aa6.36□□□□□ -1.39
CHD3-212ENST00000570758 ENAHQ8N8S7 591 aaPredicted RBP6.36□□□□□ -1.39
CHD3-212ENST00000570758 FAM133AQ8N9E0 248 aa6.36□□□□□ -1.39
CHD3-212ENST00000570758 RUFY2Q8WXA3 655 aa6.36□□□□□ -1.39
CHD3-212ENST00000570758 ANKS1AQ92625 1134 aa6.36□□□□□ -1.39
CHD3-212ENST00000570758 TRERF1Q96PN7 1200 aa6.36□□□□□ -1.39
CHD3-212ENST00000570758 SENP6Q9GZR1 1112 aaPredicted RBP6.36□□□□□ -1.39
CHD3-212ENST00000570758 UBA5Q9GZZ9 404 aa6.36□□□□□ -1.39
CHD3-212ENST00000570758 KATNBL1Q9H079 304 aa6.36□□□□□ -1.39
CHD3-212ENST00000570758 CPVLQ9H3G5 476 aa6.36□□□□□ -1.39
CHD3-212ENST00000570758 ACAD9Q9H845 621 aa6.36□□□□□ -1.39
CHD3-212ENST00000570758 CDKN2AIPQ9NXV6 580 aaPredicted RBP6.36□□□□□ -1.39
CHD3-212ENST00000570758 RBM27Q9P2N5 1060 aaKnown RBP6.36□□□□□ -1.39
CHD3-212ENST00000570758 FBXO40Q9UH90 709 aa6.36□□□□□ -1.39
CHD3-212ENST00000570758 NRBP1Q9UHY1 535 aa6.36□□□□□ -1.39
CHD3-212ENST00000570758 CTNNA3Q9UI47 895 aa6.36□□□□□ -1.39
CHD3-212ENST00000570758 CCPG1Q9ULG6 757 aa6.36□□□□□ -1.39
CHD3-212ENST00000570758 DDX49Q9Y6V7 483 aaKnown RBP6.36□□□□□ -1.39
CHD3-212ENST00000570758 TNKSO95271 1327 aa6.35□□□□□ -1.39
CHD3-212ENST00000570758 NFIBO00712 420 aa6.35□□□□□ -1.39
CHD3-212ENST00000570758 ADCY6O43306 1168 aa6.35□□□□□ -1.39
CHD3-212ENST00000570758 PGK1P00558 417 aa6.35□□□□□ -1.39
CHD3-212ENST00000570758 MYCNP04198 464 aaPredicted RBP6.35□□□□□ -1.39
CHD3-212ENST00000570758 ICAM1P05362 532 aa6.35□□□□□ -1.39
CHD3-212ENST00000570758 CYP21A2P08686 494 aa6.35□□□□□ -1.39
CHD3-212ENST00000570758 GOLGA8HP0CJ92 632 aa6.35□□□□□ -1.39
CHD3-212ENST00000570758 AKR1A1P14550 325 aa6.35□□□□□ -1.39
CHD3-212ENST00000570758 ATN1P54259 1190 aaPredicted RBP6.35□□□□□ -1.39
CHD3-212ENST00000570758 ACVR2BQ13705 512 aa6.35□□□□□ -1.39
CHD3-212ENST00000570758 SEC23AQ15436 765 aa6.35□□□□□ -1.39
CHD3-212ENST00000570758 STOX1Q6ZVD7 989 aa6.35□□□□□ -1.39
CHD3-212ENST00000570758 CENPQQ7L2Z9 268 aaPredicted RBP6.35□□□□□ -1.39
CHD3-212ENST00000570758 IQCA1Q86XH1 822 aa6.35□□□□□ -1.39
CHD3-212ENST00000570758 MSL3Q8N5Y2 521 aaKnown RBP6.35□□□□□ -1.39
CHD3-212ENST00000570758 ARRDC4Q8NCT1 418 aa6.35□□□□□ -1.39
CHD3-212ENST00000570758 PNMA1Q8ND90 353 aa6.35□□□□□ -1.39
CHD3-212ENST00000570758 CLEC4DQ8WXI8 215 aa6.35□□□□□ -1.39
CHD3-212ENST00000570758 PURBQ96QR8 312 aaKnown RBP6.35□□□□□ -1.39
CHD3-212ENST00000570758 ZSCAN10Q96SZ4 725 aaPredicted RBP6.35□□□□□ -1.39
CHD3-212ENST00000570758 KAT14Q9H8E8 782 aa6.35□□□□□ -1.39
CHD3-212ENST00000570758 XPNPEP3Q9NQH7 507 aa6.35□□□□□ -1.39
CHD3-212ENST00000570758 CYP39A1Q9NYL5 469 aa6.35□□□□□ -1.39
CHD3-212ENST00000570758 ZHX1Q9UKY1 873 aaPredicted RBP6.35□□□□□ -1.39
CHD3-212ENST00000570758 CNPY2Q9Y2B0 182 aa6.35□□□□□ -1.39
CHD3-212ENST00000570758 SMCHD1A6NHR9 2005 aa6.35□□□□□ -1.39
CHD3-212ENST00000570758 SYNRGQ9UMZ2 1314 aa6.34□□□□□ -1.39
CHD3-212ENST00000570758 MYADML2A6NDP7 307 aa6.34□□□□□ -1.39
CHD3-212ENST00000570758 KBTBD13C9JR72 458 aa6.34□□□□□ -1.39
CHD3-212ENST00000570758 E7EWF7 191 aa6.34□□□□□ -1.39
CHD3-212ENST00000570758 ADAMTS4O75173 837 aa6.34□□□□□ -1.39
CHD3-212ENST00000570758 RARBP10826 455 aa6.34□□□□□ -1.39
CHD3-212ENST00000570758 PTGS1P23219 599 aa6.34□□□□□ -1.39
CHD3-212ENST00000570758 ADCYAP1R1P41586 468 aa6.34□□□□□ -1.39
CHD3-212ENST00000570758 NT5C2P49902 561 aa6.34□□□□□ -1.39
CHD3-212ENST00000570758 FXR1P51114 621 aaKnown RBP eCLIP6.34□□□□□ -1.39
CHD3-212ENST00000570758 RTP1P59025 263 aa6.34□□□□□ -1.39
CHD3-212ENST00000570758 BAATQ14032 418 aaPredicted RBP6.34□□□□□ -1.39
CHD3-212ENST00000570758 CCDC144BQ3MJ40 725 aa6.34□□□□□ -1.39
CHD3-212ENST00000570758 CCDC178Q5BJE1 867 aa6.34□□□□□ -1.39
CHD3-212ENST00000570758 GPATCH4Q5T3I0 446 aaKnown RBP6.34□□□□□ -1.39
CHD3-212ENST00000570758 NSMFQ6X4W1 530 aa6.34□□□□□ -1.39
CHD3-212ENST00000570758 SLC30A10Q6XR72 485 aa6.34□□□□□ -1.39
CHD3-212ENST00000570758 SLC39A5Q6ZMH5 540 aa6.34□□□□□ -1.39
CHD3-212ENST00000570758 ARMCX2Q7L311 632 aa6.34□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms