RNA–Protein interactions for RNA: ENST00000569252.5

USB1-215, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 573 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-215ENST00000569252 PHIPQ8WWQ0 1821 aa18.63■□□□□ 0.57
USB1-215ENST00000569252 KLRF2D3W0D1 207 aa18.62■□□□□ 0.57
USB1-215ENST00000569252 CPLX1O14810 134 aa18.62■□□□□ 0.57
USB1-215ENST00000569252 PLA2G6O60733 806 aa18.62■□□□□ 0.57
USB1-215ENST00000569252 FDX1P10109 184 aa18.62■□□□□ 0.57
USB1-215ENST00000569252 RXRAP19793 462 aa18.62■□□□□ 0.57
USB1-215ENST00000569252 PDIA3P30101 505 aaKnown RBP18.62■□□□□ 0.57
USB1-215ENST00000569252 EVCP57679 992 aa18.62■□□□□ 0.57
USB1-215ENST00000569252 STK3Q13188 491 aa18.62■□□□□ 0.57
USB1-215ENST00000569252 UBE2Q1Q7Z7E8 422 aa18.62■□□□□ 0.57
USB1-215ENST00000569252 RAB11FIP4Q86YS3 637 aa18.62■□□□□ 0.57
USB1-215ENST00000569252 PALM3A6NDB9 673 aaPredicted RBP18.61■□□□□ 0.57
USB1-215ENST00000569252 BCRP11274 1271 aa18.61■□□□□ 0.57
USB1-215ENST00000569252 CCT2P78371 535 aaKnown RBP18.61■□□□□ 0.57
USB1-215ENST00000569252 P2RX7Q99572 595 aaKnown RBP18.61■□□□□ 0.57
USB1-215ENST00000569252 VAT1LQ9HCJ6 419 aa18.61■□□□□ 0.57
USB1-215ENST00000569252 MAD2L2Q9UI95 211 aa18.61■□□□□ 0.57
USB1-215ENST00000569252 TPCN1Q9ULQ1 816 aa18.61■□□□□ 0.57
USB1-215ENST00000569252 DSG3P32926 999 aa18.6■□□□□ 0.57
USB1-215ENST00000569252 SLC16A2P36021 539 aa18.6■□□□□ 0.57
USB1-215ENST00000569252 GJA8P48165 433 aa18.6■□□□□ 0.57
USB1-215ENST00000569252 GCLCP48506 637 aaPredicted RBP18.6■□□□□ 0.57
USB1-215ENST00000569252 AKAP17AQ02040 695 aaKnown RBP18.6■□□□□ 0.57
USB1-215ENST00000569252 SYDE2Q5VT97 1194 aa18.6■□□□□ 0.57
USB1-215ENST00000569252 CCAR1Q8IX12 1150 aaKnown RBP18.6■□□□□ 0.57
USB1-215ENST00000569252 MB21D1Q8N884 522 aa18.6■□□□□ 0.57
USB1-215ENST00000569252 UBA5Q9GZZ9 404 aa18.6■□□□□ 0.57
USB1-215ENST00000569252 SH2B1Q9NRF2 756 aaPredicted RBP18.6■□□□□ 0.57
USB1-215ENST00000569252 PPP1R9AQ9ULJ8 1098 aa18.6■□□□□ 0.57
USB1-215ENST00000569252 DOCK3Q8IZD9 2030 aa18.6■□□□□ 0.57
USB1-215ENST00000569252 PTPRFP10586 1907 aa18.59■□□□□ 0.57
USB1-215ENST00000569252 ALPK3Q96L96 1907 aa18.59■□□□□ 0.57
USB1-215ENST00000569252 SOX1O00570 391 aaPredicted RBP18.59■□□□□ 0.57
USB1-215ENST00000569252 CDKL5O76039 1030 aa18.59■□□□□ 0.57
USB1-215ENST00000569252 SMARCA1P28370 1054 aa18.59■□□□□ 0.57
USB1-215ENST00000569252 HERVK_113P62684 666 aa18.59■□□□□ 0.57
USB1-215ENST00000569252 TTBK2Q6IQ55 1244 aa18.59■□□□□ 0.57
USB1-215ENST00000569252 BTNL9Q6UXG8 535 aa18.59■□□□□ 0.57
USB1-215ENST00000569252 STAG2Q8N3U4 1231 aa18.59■□□□□ 0.57
USB1-215ENST00000569252 CCDC82Q8N4S0 544 aa18.59■□□□□ 0.57
USB1-215ENST00000569252 U2AF1L4Q8WU68 220 aaKnown RBP18.59■□□□□ 0.57
USB1-215ENST00000569252 FBXO28Q9NVF7 368 aa18.59■□□□□ 0.57
USB1-215ENST00000569252 PNMA2Q9UL42 364 aa18.59■□□□□ 0.57
USB1-215ENST00000569252 COL6A3P12111 3177 aa18.58■□□□□ 0.57
USB1-215ENST00000569252 PFKFB2O60825 505 aa18.58■□□□□ 0.56
USB1-215ENST00000569252 FARP2O94887 1054 aaPredicted RBP18.58■□□□□ 0.56
USB1-215ENST00000569252 GJB1P08034 283 aa18.58■□□□□ 0.56
USB1-215ENST00000569252 TRAF1Q13077 416 aa18.58■□□□□ 0.56
USB1-215ENST00000569252 SEC63Q9UGP8 760 aaKnown RBP18.58■□□□□ 0.56
USB1-215ENST00000569252 PRR12Q9ULL5 1215 aa18.58■□□□□ 0.56
USB1-215ENST00000569252 GNRH1P01148 92 aa18.57■□□□□ 0.56
USB1-215ENST00000569252 INHAP05111 366 aa18.57■□□□□ 0.56
USB1-215ENST00000569252 ADD1P35611 737 aaKnown RBP18.57■□□□□ 0.56
USB1-215ENST00000569252 FLT3LGP49771 235 aa18.57■□□□□ 0.56
USB1-215ENST00000569252 PRMT2P55345 433 aa18.57■□□□□ 0.56
USB1-215ENST00000569252 FCGRTP55899 365 aa18.57■□□□□ 0.56
USB1-215ENST00000569252 PLS1Q14651 629 aa18.57■□□□□ 0.56
USB1-215ENST00000569252 HSCBQ8IWL3 235 aa18.57■□□□□ 0.56
USB1-215ENST00000569252 TRIM22Q8IYM9 498 aa18.57■□□□□ 0.56
USB1-215ENST00000569252 ADGRF4Q8IZF3 695 aa18.57■□□□□ 0.56
USB1-215ENST00000569252 DIS3LQ8TF46 1054 aaKnown RBP18.57■□□□□ 0.56
USB1-215ENST00000569252 RRP36Q96EU6 259 aaKnown RBP18.57■□□□□ 0.56
USB1-215ENST00000569252 PAGR1Q9BTK6 254 aa18.57■□□□□ 0.56
USB1-215ENST00000569252 CWC22Q9HCG8 908 aaKnown RBP18.57■□□□□ 0.56
USB1-215ENST00000569252 RABGAP1Q9Y3P9 1069 aa18.57■□□□□ 0.56
USB1-215ENST00000569252 VWA5AO00534 786 aa18.56■□□□□ 0.56
USB1-215ENST00000569252 ADCY3O60266 1144 aa18.56■□□□□ 0.56
USB1-215ENST00000569252 SLC4A3P48751 1232 aa18.56■□□□□ 0.56
USB1-215ENST00000569252 CCNA1P78396 465 aa18.56■□□□□ 0.56
USB1-215ENST00000569252 ME3Q16798 604 aa18.56■□□□□ 0.56
USB1-215ENST00000569252 TMTC3Q6ZXV5 915 aa18.56■□□□□ 0.56
USB1-215ENST00000569252 RASGRP2Q7LDG7 609 aa18.56■□□□□ 0.56
USB1-215ENST00000569252 GPRC5AQ8NFJ5 357 aa18.56■□□□□ 0.56
USB1-215ENST00000569252 ATG4CQ96DT6 458 aa18.56■□□□□ 0.56
USB1-215ENST00000569252 LRCH3Q96II8 777 aa18.56■□□□□ 0.56
USB1-215ENST00000569252 PRO3102Q9H379 93 aa18.56■□□□□ 0.56
USB1-215ENST00000569252 SPDYE16A6NNV3 312 aaPredicted RBP18.55■□□□□ 0.56
USB1-215ENST00000569252 PEX10O60683 326 aa18.55■□□□□ 0.56
USB1-215ENST00000569252 HOXD10P28358 340 aa18.55■□□□□ 0.56
USB1-215ENST00000569252 SSRP1Q08945 709 aaKnown RBP18.55■□□□□ 0.56
USB1-215ENST00000569252 LBX2Q6XYB7 198 aa18.55■□□□□ 0.56
USB1-215ENST00000569252 CPXCR1Q8N123 301 aa18.55■□□□□ 0.56
USB1-215ENST00000569252 SRBD1Q8N5C6 995 aaKnown RBP18.55■□□□□ 0.56
USB1-215ENST00000569252 ANKRD13CQ8N6S4 541 aa18.55■□□□□ 0.56
USB1-215ENST00000569252 NECAB1Q8N987 351 aa18.55■□□□□ 0.56
USB1-215ENST00000569252 DEFB118Q96PH6 123 aa18.55■□□□□ 0.56
USB1-215ENST00000569252 SPZ1Q9BXG8 430 aa18.55■□□□□ 0.56
USB1-215ENST00000569252 SLC38A10Q9HBR0 1119 aa18.55■□□□□ 0.56
USB1-215ENST00000569252 NCOA5Q9HCD5 579 aaKnown RBP18.55■□□□□ 0.56
USB1-215ENST00000569252 PLEKHA8P1O95397 391 aa18.54■□□□□ 0.56
USB1-215ENST00000569252 CDC27P30260 824 aa18.54■□□□□ 0.56
USB1-215ENST00000569252 OAZ1P54368 228 aa18.54■□□□□ 0.56
USB1-215ENST00000569252 SCRN1Q12765 414 aa18.54■□□□□ 0.56
USB1-215ENST00000569252 TRIM32Q13049 653 aa18.54■□□□□ 0.56
USB1-215ENST00000569252 BECN1Q14457 450 aa18.54■□□□□ 0.56
USB1-215ENST00000569252 CCDC174Q6PII3 467 aa18.54■□□□□ 0.56
USB1-215ENST00000569252 HOMER1Q86YM7 354 aa18.54■□□□□ 0.56
USB1-215ENST00000569252 CMTR1Q8N1G2 835 aaKnown RBP18.54■□□□□ 0.56
USB1-215ENST00000569252 PIBF1Q8WXW3 757 aa18.54■□□□□ 0.56
USB1-215ENST00000569252 GTF3C6Q969F1 213 aa18.54■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms