RNA–Protein interactions for RNA: ENST00000568917.1

CNOT1-214, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 5

Gene CNOT1, Length 1,317 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-214ENST00000568917 ZNF543Q08ER8 600 aa10.76□□□□□ -0.69
CNOT1-214ENST00000568917 SF3A1Q15459 793 aaKnown RBP10.76□□□□□ -0.69
CNOT1-214ENST00000568917 ABCB5Q2M3G0 1257 aa10.76□□□□□ -0.69
CNOT1-214ENST00000568917 PADI6Q6TGC4 694 aa10.76□□□□□ -0.69
CNOT1-214ENST00000568917 TEX2Q8IWB9 1127 aa10.76□□□□□ -0.69
CNOT1-214ENST00000568917 STAG2Q8N3U4 1231 aa10.76□□□□□ -0.69
CNOT1-214ENST00000568917 GMCL1P1Q8NEA9 526 aa10.76□□□□□ -0.69
CNOT1-214ENST00000568917 BICD2Q8TD16 824 aa10.76□□□□□ -0.69
CNOT1-214ENST00000568917 TNFRSF25Q93038 417 aa10.76□□□□□ -0.69
CNOT1-214ENST00000568917 XPO5Q9HAV4 1204 aaKnown RBP eCLIP10.76□□□□□ -0.69
CNOT1-214ENST00000568917 VPS54Q9P1Q0 977 aa10.76□□□□□ -0.69
CNOT1-214ENST00000568917 CLIP2Q9UDT6 1046 aa10.76□□□□□ -0.69
CNOT1-214ENST00000568917 SEC63Q9UGP8 760 aaKnown RBP10.76□□□□□ -0.69
CNOT1-214ENST00000568917 SBF1O95248 1867 aa10.76□□□□□ -0.69
CNOT1-214ENST00000568917 MPHOSPH10O00566 681 aaKnown RBP10.75□□□□□ -0.69
CNOT1-214ENST00000568917 CYTH3O43739 400 aa10.75□□□□□ -0.69
CNOT1-214ENST00000568917 LMNB1P20700 586 aa10.75□□□□□ -0.69
CNOT1-214ENST00000568917 CMA1P23946 247 aa10.75□□□□□ -0.69
CNOT1-214ENST00000568917 GNA11P29992 359 aa10.75□□□□□ -0.69
CNOT1-214ENST00000568917 ME1P48163 572 aa10.75□□□□□ -0.69
CNOT1-214ENST00000568917 NLRP5P59047 1200 aa10.75□□□□□ -0.69
CNOT1-214ENST00000568917 ICA1Q05084 483 aa10.75□□□□□ -0.69
CNOT1-214ENST00000568917 PTPAQ15257 358 aa10.75□□□□□ -0.69
CNOT1-214ENST00000568917 NPY5RQ15761 445 aa10.75□□□□□ -0.69
CNOT1-214ENST00000568917 PPP1R18Q6NYC8 613 aa10.75□□□□□ -0.69
CNOT1-214ENST00000568917 CCDC73Q6ZRK6 1079 aa10.75□□□□□ -0.69
CNOT1-214ENST00000568917 RBM43Q6ZSC3 357 aaKnown RBP10.75□□□□□ -0.69
CNOT1-214ENST00000568917 PACS2Q86VP3 889 aa10.75□□□□□ -0.69
CNOT1-214ENST00000568917 NLGN2Q8NFZ4 835 aa10.75□□□□□ -0.69
CNOT1-214ENST00000568917 MRPS27Q92552 414 aaKnown RBP10.75□□□□□ -0.69
CNOT1-214ENST00000568917 KCTD12Q96CX2 325 aaKnown RBP10.75□□□□□ -0.69
CNOT1-214ENST00000568917 HOOK2Q96ED9 719 aa10.75□□□□□ -0.69
CNOT1-214ENST00000568917 PCDHA7Q9UN72 937 aa10.75□□□□□ -0.69
CNOT1-214ENST00000568917 PCDHA4Q9UN74 947 aa10.75□□□□□ -0.69
CNOT1-214ENST00000568917 KCNJ14Q9UNX9 436 aa10.75□□□□□ -0.69
CNOT1-214ENST00000568917 CLIC4Q9Y696 253 aa10.75□□□□□ -0.69
CNOT1-214ENST00000568917 FAM237AA0A1B0GTK4 181 aa10.74□□□□□ -0.69
CNOT1-214ENST00000568917 USP17L5A8MUK1 530 aa10.74□□□□□ -0.69
CNOT1-214ENST00000568917 TCP10L2B9ZVM9 353 aa10.74□□□□□ -0.69
CNOT1-214ENST00000568917 UBE2Q2LH0YL09 131 aa10.74□□□□□ -0.69
CNOT1-214ENST00000568917 M0R2N6 131 aa10.74□□□□□ -0.69
CNOT1-214ENST00000568917 GPR37O15354 613 aa10.74□□□□□ -0.69
CNOT1-214ENST00000568917 CUTAO60888 179 aa10.74□□□□□ -0.69
CNOT1-214ENST00000568917 EEF2P13639 858 aaKnown RBP10.74□□□□□ -0.69
CNOT1-214ENST00000568917 RASSF7Q02833 373 aa10.74□□□□□ -0.69
CNOT1-214ENST00000568917 FAM160A1Q05DH4 1040 aa10.74□□□□□ -0.69
CNOT1-214ENST00000568917 USP17L2Q6R6M4 530 aa10.74□□□□□ -0.69
CNOT1-214ENST00000568917 LAPTM4BQ86VI4 370 aa10.74□□□□□ -0.69
CNOT1-214ENST00000568917 GPC2Q8N158 579 aa10.74□□□□□ -0.69
CNOT1-214ENST00000568917 MTMR8Q96EF0 704 aa10.74□□□□□ -0.69
CNOT1-214ENST00000568917 GMCL1Q96IK5 515 aa10.74□□□□□ -0.69
CNOT1-214ENST00000568917 ZMYND12Q9H0C1 365 aa10.74□□□□□ -0.69
CNOT1-214ENST00000568917 GLT8D2Q9H1C3 349 aa10.74□□□□□ -0.69
CNOT1-214ENST00000568917 NUP62CLQ9H1M0 184 aa10.74□□□□□ -0.69
CNOT1-214ENST00000568917 CLSTN2Q9H4D0 955 aa10.74□□□□□ -0.69
CNOT1-214ENST00000568917 GRPEL1Q9HAV7 217 aa10.74□□□□□ -0.69
CNOT1-214ENST00000568917 PGAP2Q9UHJ9 254 aa10.74□□□□□ -0.69
CNOT1-214ENST00000568917 CLRN2A0PK11 232 aa10.73□□□□□ -0.69
CNOT1-214ENST00000568917 SYCE3A1L190 88 aa10.73□□□□□ -0.69
CNOT1-214ENST00000568917 TRIM75PA6NK02 468 aa10.73□□□□□ -0.69
CNOT1-214ENST00000568917 H7C1D1 291 aa10.73□□□□□ -0.69
CNOT1-214ENST00000568917 STXBP3O00186 592 aa10.73□□□□□ -0.69
CNOT1-214ENST00000568917 SMAPO00193 183 aa10.73□□□□□ -0.69
CNOT1-214ENST00000568917 GMPSP49915 693 aaPredicted RBP10.73□□□□□ -0.69
CNOT1-214ENST00000568917 TOB1P50616 345 aaPredicted RBP10.73□□□□□ -0.69
CNOT1-214ENST00000568917 CEBPZQ03701 1054 aaKnown RBP10.73□□□□□ -0.69
CNOT1-214ENST00000568917 TRAF1Q13077 416 aa10.73□□□□□ -0.69
CNOT1-214ENST00000568917 ORC2Q13416 577 aaPredicted RBP10.73□□□□□ -0.69
CNOT1-214ENST00000568917 MAP3K11Q16584 847 aa10.73□□□□□ -0.69
CNOT1-214ENST00000568917 CCAR1Q8IX12 1150 aaKnown RBP10.73□□□□□ -0.69
CNOT1-214ENST00000568917 ELOA2Q8IYF1 753 aaPredicted RBP10.73□□□□□ -0.69
CNOT1-214ENST00000568917 BLIDQ8IZY5 108 aa10.73□□□□□ -0.69
CNOT1-214ENST00000568917 ENGASEQ8NFI3 743 aa10.73□□□□□ -0.69
CNOT1-214ENST00000568917 SHISA4Q96DD7 197 aa10.73□□□□□ -0.69
CNOT1-214ENST00000568917 TIGD1Q96MW7 591 aa10.73□□□□□ -0.69
CNOT1-214ENST00000568917 FTOQ9C0B1 505 aaKnown RBP eCLIP10.73□□□□□ -0.69
CNOT1-214ENST00000568917 SH2D4AQ9H788 454 aa10.73□□□□□ -0.69
CNOT1-214ENST00000568917 VEZTQ9HBM0 779 aa10.73□□□□□ -0.69
CNOT1-214ENST00000568917 ARHGEF10LQ9HCE6 1279 aa10.73□□□□□ -0.69
CNOT1-214ENST00000568917 C6orf50Q9HD87 102 aa10.73□□□□□ -0.69
CNOT1-214ENST00000568917 DACT1Q9NYF0 836 aa10.73□□□□□ -0.69
CNOT1-214ENST00000568917 CNOT7Q9UIV1 285 aaKnown RBP10.73□□□□□ -0.69
CNOT1-214ENST00000568917 PPP2R3BQ9Y5P8 575 aa10.73□□□□□ -0.69
CNOT1-214ENST00000568917 BAZ2BQ9UIF8 2168 aaKnown RBP10.73□□□□□ -0.69
CNOT1-214ENST00000568917 PNMA6FA0A0J9YX94 578 aa10.72□□□□□ -0.69
CNOT1-214ENST00000568917 CAVIN2O95810 425 aa10.72□□□□□ -0.69
CNOT1-214ENST00000568917 GH2P01242 217 aa10.72□□□□□ -0.69
CNOT1-214ENST00000568917 ASNSP08243 561 aa10.72□□□□□ -0.69
CNOT1-214ENST00000568917 LIG1P18858 919 aa10.72□□□□□ -0.69
CNOT1-214ENST00000568917 SLC1A4P43007 532 aa10.72□□□□□ -0.69
CNOT1-214ENST00000568917 NR5A1Q13285 461 aa10.72□□□□□ -0.69
CNOT1-214ENST00000568917 SEPT2Q15019 361 aa10.72□□□□□ -0.69
CNOT1-214ENST00000568917 SLC35G1Q2M3R5 365 aa10.72□□□□□ -0.69
CNOT1-214ENST00000568917 AXDND1Q5T1B0 1012 aaPredicted RBP10.72□□□□□ -0.69
CNOT1-214ENST00000568917 WWC2Q6AWC2 1192 aa10.72□□□□□ -0.69
CNOT1-214ENST00000568917 BTNL9Q6UXG8 535 aa10.72□□□□□ -0.69
CNOT1-214ENST00000568917 GAS2L3Q86XJ1 694 aa10.72□□□□□ -0.69
CNOT1-214ENST00000568917 APOBEC3FQ8IUX4 373 aaKnown RBP10.72□□□□□ -0.69
CNOT1-214ENST00000568917 LRRC47Q8N1G4 583 aaKnown RBP10.72□□□□□ -0.69
CNOT1-214ENST00000568917 KRI1Q8N9T8 703 aaKnown RBP10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 144.5 ms