RNA–Protein interactions for RNA: ENST00000567720.5

COMMD4-220, Transcript of COMM domain containing 4, humanhuman

TSL 4

Gene COMMD4, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-220ENST00000567720 CTDP1Q9Y5B0 961 aaPredicted RBP20.09■□□□□ 0.81
COMMD4-220ENST00000567720 CCDC69A6NI79 296 aa20.08■□□□□ 0.81
COMMD4-220ENST00000567720 RXRAP19793 462 aa20.08■□□□□ 0.81
COMMD4-220ENST00000567720 COPB2P35606 906 aa20.08■□□□□ 0.81
COMMD4-220ENST00000567720 APOA5Q6Q788 366 aa20.08■□□□□ 0.81
COMMD4-220ENST00000567720 SH3TC2Q8TF17 1288 aa20.08■□□□□ 0.81
COMMD4-220ENST00000567720 NUP133Q8WUM0 1156 aa20.08■□□□□ 0.81
COMMD4-220ENST00000567720 NUDT12Q9BQG2 462 aa20.08■□□□□ 0.81
COMMD4-220ENST00000567720 IVNS1ABPQ9Y6Y0 642 aa20.08■□□□□ 0.81
COMMD4-220ENST00000567720 SLC15A5A6NIM6 579 aa20.07■□□□□ 0.8
COMMD4-220ENST00000567720 ICAM1P05362 532 aa20.07■□□□□ 0.8
COMMD4-220ENST00000567720 ELNP15502 786 aa20.07■□□□□ 0.8
COMMD4-220ENST00000567720 PSMA5P28066 241 aa20.07■□□□□ 0.8
COMMD4-220ENST00000567720 ADORA2AP29274 412 aa20.07■□□□□ 0.8
COMMD4-220ENST00000567720 MAP2K5Q13163 448 aa20.07■□□□□ 0.8
COMMD4-220ENST00000567720 CDC37Q16543 378 aaPredicted RBP20.07■□□□□ 0.8
COMMD4-220ENST00000567720 SLC9C1Q4G0N8 1177 aa20.07■□□□□ 0.8
COMMD4-220ENST00000567720 MICU3Q86XE3 530 aa20.07■□□□□ 0.8
COMMD4-220ENST00000567720 ADGRF4Q8IZF3 695 aa20.07■□□□□ 0.8
COMMD4-220ENST00000567720 APBA2Q99767 749 aa20.07■□□□□ 0.8
COMMD4-220ENST00000567720 UPF3BQ9BZI7 483 aaKnown RBP20.07■□□□□ 0.8
COMMD4-220ENST00000567720 HOMER2Q9NSB8 354 aa20.07■□□□□ 0.8
COMMD4-220ENST00000567720 KLRF2D3W0D1 207 aa20.06■□□□□ 0.8
COMMD4-220ENST00000567720 ADCY3O60266 1144 aa20.06■□□□□ 0.8
COMMD4-220ENST00000567720 EIF5BO60841 1220 aaKnown RBP20.06■□□□□ 0.8
COMMD4-220ENST00000567720 CYP2B6P20813 491 aa20.06■□□□□ 0.8
COMMD4-220ENST00000567720 RGS2P41220 211 aa20.06■□□□□ 0.8
COMMD4-220ENST00000567720 SLC4A3P48751 1232 aa20.06■□□□□ 0.8
COMMD4-220ENST00000567720 Q6ZUG5 572 aa20.06■□□□□ 0.8
COMMD4-220ENST00000567720 DHX30Q7L2E3 1194 aaKnown RBP eCLIP20.06■□□□□ 0.8
COMMD4-220ENST00000567720 NBPF11Q86T75 865 aa20.06■□□□□ 0.8
COMMD4-220ENST00000567720 TMTC2Q8N394 836 aa20.06■□□□□ 0.8
COMMD4-220ENST00000567720 SLAIN1Q8ND83 568 aa20.06■□□□□ 0.8
COMMD4-220ENST00000567720 ARMC5Q96C12 935 aa20.06■□□□□ 0.8
COMMD4-220ENST00000567720 MAP3K14Q99558 947 aa20.06■□□□□ 0.8
COMMD4-220ENST00000567720 AGXT2Q9BYV1 514 aa20.06■□□□□ 0.8
COMMD4-220ENST00000567720 TM6SF1Q9BZW5 370 aa20.06■□□□□ 0.8
COMMD4-220ENST00000567720 ZSWIM6Q9HCJ5 1215 aa20.06■□□□□ 0.8
COMMD4-220ENST00000567720 RNF146Q9NTX7 359 aa20.06■□□□□ 0.8
COMMD4-220ENST00000567720 BRPF3Q9ULD4 1205 aa20.06■□□□□ 0.8
COMMD4-220ENST00000567720 CCPG1Q9ULG6 757 aa20.06■□□□□ 0.8
COMMD4-220ENST00000567720 SLC12A7Q9Y666 1083 aa20.06■□□□□ 0.8
COMMD4-220ENST00000567720 KIAA0100Q14667 2235 aaKnown RBP20.06■□□□□ 0.8
COMMD4-220ENST00000567720 CYTH3O43739 400 aa20.05■□□□□ 0.8
COMMD4-220ENST00000567720 GRK4P32298 578 aa20.05■□□□□ 0.8
COMMD4-220ENST00000567720 ANAPC15P60006 121 aa20.05■□□□□ 0.8
COMMD4-220ENST00000567720 RUFY3Q7L099 469 aa20.05■□□□□ 0.8
COMMD4-220ENST00000567720 CCDC144CPQ8IYA2 1237 aa20.05■□□□□ 0.8
COMMD4-220ENST00000567720 ABRAQ8N0Z2 381 aa20.05■□□□□ 0.8
COMMD4-220ENST00000567720 CTCFLQ8NI51 663 aaPredicted RBP20.05■□□□□ 0.8
COMMD4-220ENST00000567720 TRIB2Q92519 343 aa20.05■□□□□ 0.8
COMMD4-220ENST00000567720 IL17RAQ96F46 866 aa20.05■□□□□ 0.8
COMMD4-220ENST00000567720 ZNF333Q96JL9 665 aa20.05■□□□□ 0.8
COMMD4-220ENST00000567720 MMP19Q99542 508 aa20.05■□□□□ 0.8
COMMD4-220ENST00000567720 JMJD4Q9H9V9 463 aa20.05■□□□□ 0.8
COMMD4-220ENST00000567720 NID2Q14112 1375 aa20.05■□□□□ 0.8
COMMD4-220ENST00000567720 KLF18A0A0U1RQI7 1052 aa20.04■□□□□ 0.8
COMMD4-220ENST00000567720 DHX16O60231 1041 aaKnown RBP20.04■□□□□ 0.8
COMMD4-220ENST00000567720 PLEKHA8P1O95397 391 aa20.04■□□□□ 0.8
COMMD4-220ENST00000567720 HOXC6P09630 235 aa20.04■□□□□ 0.8
COMMD4-220ENST00000567720 FCER1AP12319 257 aa20.04■□□□□ 0.8
COMMD4-220ENST00000567720 ALAS1P13196 640 aa20.04■□□□□ 0.8
COMMD4-220ENST00000567720 CCL14Q16627 93 aa20.04■□□□□ 0.8
COMMD4-220ENST00000567720 QRICH1Q2TAL8 776 aa20.04■□□□□ 0.8
COMMD4-220ENST00000567720 MUM1L1Q5H9M0 696 aa20.04■□□□□ 0.8
COMMD4-220ENST00000567720 FBXL16Q8N461 479 aa20.04■□□□□ 0.8
COMMD4-220ENST00000567720 CHST13Q8NET6 341 aa20.04■□□□□ 0.8
COMMD4-220ENST00000567720 NPLOC4Q8TAT6 608 aa20.04■□□□□ 0.8
COMMD4-220ENST00000567720 PXYLP1Q8TE99 480 aa20.04■□□□□ 0.8
COMMD4-220ENST00000567720 BRF1Q92994 677 aa20.04■□□□□ 0.8
COMMD4-220ENST00000567720 MTMR8Q96EF0 704 aa20.04■□□□□ 0.8
COMMD4-220ENST00000567720 ACAD9Q9H845 621 aa20.04■□□□□ 0.8
COMMD4-220ENST00000567720 STRNO43815 780 aa20.03■□□□□ 0.8
COMMD4-220ENST00000567720 COBLO75128 1261 aa20.03■□□□□ 0.8
COMMD4-220ENST00000567720 CALM1P0DP23 149 aa20.03■□□□□ 0.8
COMMD4-220ENST00000567720 CALM2P0DP24 149 aa20.03■□□□□ 0.8
COMMD4-220ENST00000567720 CALM3P0DP25 149 aa20.03■□□□□ 0.8
COMMD4-220ENST00000567720 XRCC5P13010 732 aaKnown RBP20.03■□□□□ 0.8
COMMD4-220ENST00000567720 APOBRQ0VD83 1088 aa20.03■□□□□ 0.8
COMMD4-220ENST00000567720 KCTD2Q14681 263 aa20.03■□□□□ 0.8
COMMD4-220ENST00000567720 TKFCQ3LXA3 575 aa20.03■□□□□ 0.8
COMMD4-220ENST00000567720 RIOX1Q9H6W3 641 aa20.03■□□□□ 0.8
COMMD4-220ENST00000567720 FLRT1Q9NZU1 646 aa20.03■□□□□ 0.8
COMMD4-220ENST00000567720 CYP46A1Q9Y6A2 500 aa20.03■□□□□ 0.8
COMMD4-220ENST00000567720 GOLGA8BA8MQT2 603 aa20.02■□□□□ 0.8
COMMD4-220ENST00000567720 ZBTB43O43298 467 aa20.02■□□□□ 0.8
COMMD4-220ENST00000567720 PPP1R11O60927 126 aaPredicted RBP20.02■□□□□ 0.8
COMMD4-220ENST00000567720 HMGCRP04035 888 aa20.02■□□□□ 0.8
COMMD4-220ENST00000567720 INHAP05111 366 aa20.02■□□□□ 0.8
COMMD4-220ENST00000567720 PGK2P07205 417 aa20.02■□□□□ 0.8
COMMD4-220ENST00000567720 KIF5BP33176 963 aa20.02■□□□□ 0.8
COMMD4-220ENST00000567720 FGD1P98174 961 aa20.02■□□□□ 0.8
COMMD4-220ENST00000567720 TRIM32Q13049 653 aa20.02■□□□□ 0.8
COMMD4-220ENST00000567720 TOB2Q14106 344 aaPredicted RBP20.02■□□□□ 0.8
COMMD4-220ENST00000567720 USH1GQ495M9 461 aa20.02■□□□□ 0.8
COMMD4-220ENST00000567720 TRERF1Q96PN7 1200 aa20.02■□□□□ 0.8
COMMD4-220ENST00000567720 SPZ1Q9BXG8 430 aa20.02■□□□□ 0.8
COMMD4-220ENST00000567720 VAT1LQ9HCJ6 419 aa20.02■□□□□ 0.8
COMMD4-220ENST00000567720 A1CFQ9NQ94 594 aaKnown RBP20.02■□□□□ 0.8
COMMD4-220ENST00000567720 FBXO40Q9UH90 709 aa20.02■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms