RNA–Protein interactions for RNA: ENST00000567445.1

CDH13-210, Transcript of cadherin 13, humanhuman

TSL 1 (best) BASIC

Gene CDH13, Length 1,456 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-210ENST00000567445 APPBP2Q92624 585 aa10.99□□□□□ -0.65
CDH13-210ENST00000567445 OSBP2Q969R2 916 aa10.99□□□□□ -0.65
CDH13-210ENST00000567445 LRCH3Q96II8 777 aa10.99□□□□□ -0.65
CDH13-210ENST00000567445 UBE2OQ9C0C9 1292 aaKnown RBP10.99□□□□□ -0.65
CDH13-210ENST00000567445 VWA5AO00534 786 aa10.98□□□□□ -0.65
CDH13-210ENST00000567445 SEPT4O43236 478 aa10.98□□□□□ -0.65
CDH13-210ENST00000567445 RAD21O60216 631 aa10.98□□□□□ -0.65
CDH13-210ENST00000567445 ZFYP08048 801 aaPredicted RBP10.98□□□□□ -0.65
CDH13-210ENST00000567445 PDIA4P13667 645 aaKnown RBP10.98□□□□□ -0.65
CDH13-210ENST00000567445 GNAT2P19087 354 aa10.98□□□□□ -0.65
CDH13-210ENST00000567445 RASA1P20936 1047 aa10.98□□□□□ -0.65
CDH13-210ENST00000567445 LRIT3Q3SXY7 679 aa10.98□□□□□ -0.65
CDH13-210ENST00000567445 TDHQ8IZJ6 230 aa10.98□□□□□ -0.65
CDH13-210ENST00000567445 ARRDC4Q8NCT1 418 aa10.98□□□□□ -0.65
CDH13-210ENST00000567445 MAML3Q96JK9 1138 aa10.98□□□□□ -0.65
CDH13-210ENST00000567445 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.98□□□□□ -0.65
CDH13-210ENST00000567445 KDM4CQ9H3R0 1056 aa10.98□□□□□ -0.65
CDH13-210ENST00000567445 MKNK2Q9HBH9 465 aa10.98□□□□□ -0.65
CDH13-210ENST00000567445 FBXO28Q9NVF7 368 aa10.98□□□□□ -0.65
CDH13-210ENST00000567445 PPP1R9AQ9ULJ8 1098 aa10.98□□□□□ -0.65
CDH13-210ENST00000567445 ROBO3Q96MS0 1386 aa10.97□□□□□ -0.65
CDH13-210ENST00000567445 COL11A1P12107 1806 aaPredicted RBP10.97□□□□□ -0.65
CDH13-210ENST00000567445 GREB1LQ9C091 1923 aaPredicted RBP10.97□□□□□ -0.65
CDH13-210ENST00000567445 ZNFX1Q9P2E3 1918 aaKnown RBP10.97□□□□□ -0.65
CDH13-210ENST00000567445 MINDY4BA8MYZ0 360 aa10.97□□□□□ -0.65
CDH13-210ENST00000567445 COPB2P35606 906 aa10.97□□□□□ -0.65
CDH13-210ENST00000567445 STAT3P40763 770 aa10.97□□□□□ -0.65
CDH13-210ENST00000567445 TSR1Q2NL82 804 aaKnown RBP10.97□□□□□ -0.65
CDH13-210ENST00000567445 LRRFIP1Q32MZ4 808 aaKnown RBP10.97□□□□□ -0.65
CDH13-210ENST00000567445 FAM83BQ5T0W9 1011 aa10.97□□□□□ -0.65
CDH13-210ENST00000567445 GJC2Q5T442 439 aaPredicted RBP10.97□□□□□ -0.65
CDH13-210ENST00000567445 RIOX2Q8IUF8 465 aa10.97□□□□□ -0.65
CDH13-210ENST00000567445 MMP19Q99542 508 aa10.97□□□□□ -0.65
CDH13-210ENST00000567445 ZNF287Q9HBT7 754 aa10.97□□□□□ -0.65
CDH13-210ENST00000567445 NYAP2Q9P242 653 aa10.97□□□□□ -0.65
CDH13-210ENST00000567445 TTC41PQ6P2S7 1318 aa10.96□□□□□ -0.65
CDH13-210ENST00000567445 KBTBD13C9JR72 458 aa10.96□□□□□ -0.65
CDH13-210ENST00000567445 GPAA1O43292 621 aa10.96□□□□□ -0.65
CDH13-210ENST00000567445 TDO2P48775 406 aa10.96□□□□□ -0.65
CDH13-210ENST00000567445 KCTD2Q14681 263 aa10.96□□□□□ -0.65
CDH13-210ENST00000567445 PRAMEF19Q5SWL8 479 aa10.96□□□□□ -0.65
CDH13-210ENST00000567445 STK11IPQ8N1F8 1099 aa10.96□□□□□ -0.65
CDH13-210ENST00000567445 ANKK1Q8NFD2 765 aa10.96□□□□□ -0.65
CDH13-210ENST00000567445 REPS2Q8NFH8 660 aa10.96□□□□□ -0.65
CDH13-210ENST00000567445 EPB41L4AQ9HCS5 686 aaPredicted RBP10.96□□□□□ -0.65
CDH13-210ENST00000567445 NRBP1Q9UHY1 535 aa10.96□□□□□ -0.65
CDH13-210ENST00000567445 ZNF214Q9UL59 606 aaPredicted RBP10.96□□□□□ -0.65
CDH13-210ENST00000567445 PATL2C9JE40 543 aaKnown RBP10.95□□□□□ -0.66
CDH13-210ENST00000567445 F5H6K3 240 aa10.95□□□□□ -0.66
CDH13-210ENST00000567445 M0R2C6 588 aa10.95□□□□□ -0.66
CDH13-210ENST00000567445 ERC2O15083 957 aa10.95□□□□□ -0.66
CDH13-210ENST00000567445 APPP05067 770 aa10.95□□□□□ -0.66
CDH13-210ENST00000567445 PGK2P07205 417 aa10.95□□□□□ -0.66
CDH13-210ENST00000567445 RTP1P59025 263 aa10.95□□□□□ -0.66
CDH13-210ENST00000567445 MDM2Q00987 491 aaPredicted RBP10.95□□□□□ -0.66
CDH13-210ENST00000567445 KLRC3Q07444 240 aa10.95□□□□□ -0.66
CDH13-210ENST00000567445 ANO1Q5XXA6 986 aa10.95□□□□□ -0.66
CDH13-210ENST00000567445 NUP88Q99567 741 aaPredicted RBP10.95□□□□□ -0.66
CDH13-210ENST00000567445 SLF1Q9BQI6 1058 aa10.95□□□□□ -0.66
CDH13-210ENST00000567445 DIS3Q9Y2L1 958 aaKnown RBP10.95□□□□□ -0.66
CDH13-210ENST00000567445 PCDHB15Q9Y5E8 787 aa10.95□□□□□ -0.66
CDH13-210ENST00000567445 COL6A3P12111 3177 aa10.95□□□□□ -0.66
CDH13-210ENST00000567445 IGKV6D-41A0A0C4DH26 115 aa10.94□□□□□ -0.66
CDH13-210ENST00000567445 NDUFB10O96000 172 aa10.94□□□□□ -0.66
CDH13-210ENST00000567445 LRRC41Q15345 812 aa10.94□□□□□ -0.66
CDH13-210ENST00000567445 ZNF792Q3KQV3 632 aa10.94□□□□□ -0.66
CDH13-210ENST00000567445 FAM47AQ5JRC9 791 aa10.94□□□□□ -0.66
CDH13-210ENST00000567445 SLC39A5Q6ZMH5 540 aa10.94□□□□□ -0.66
CDH13-210ENST00000567445 IFNL3Q8IZI9 196 aa10.94□□□□□ -0.66
CDH13-210ENST00000567445 ZNF444Q8N0Y2 327 aaPredicted RBP10.94□□□□□ -0.66
CDH13-210ENST00000567445 PRPF38AQ8NAV1 312 aaKnown RBP10.94□□□□□ -0.66
CDH13-210ENST00000567445 PI4K2BQ8TCG2 481 aa10.94□□□□□ -0.66
CDH13-210ENST00000567445 LBHD1Q9BQE6 289 aaPredicted RBP10.94□□□□□ -0.66
CDH13-210ENST00000567445 TINF2Q9BSI4 451 aa10.94□□□□□ -0.66
CDH13-210ENST00000567445 TEX13BQ9BXU2 312 aa10.94□□□□□ -0.66
CDH13-210ENST00000567445 NACAP1Q9BZK3 213 aa10.94□□□□□ -0.66
CDH13-210ENST00000567445 CLIP2Q9UDT6 1046 aa10.94□□□□□ -0.66
CDH13-210ENST00000567445 PRKAG2Q9UGJ0 569 aa10.94□□□□□ -0.66
CDH13-210ENST00000567445 SYNPO2Q9UMS6 1093 aa10.94□□□□□ -0.66
CDH13-210ENST00000567445 SMCHD1A6NHR9 2005 aa10.94□□□□□ -0.66
CDH13-210ENST00000567445 PRDM1O75626 825 aa10.93□□□□□ -0.66
CDH13-210ENST00000567445 RARBP10826 455 aa10.93□□□□□ -0.66
CDH13-210ENST00000567445 SNX17Q15036 470 aa10.93□□□□□ -0.66
CDH13-210ENST00000567445 SNRNP48Q6IEG0 339 aaKnown RBP10.93□□□□□ -0.66
CDH13-210ENST00000567445 DEFB123Q8N688 67 aa10.93□□□□□ -0.66
CDH13-210ENST00000567445 MKL1Q969V6 931 aa10.93□□□□□ -0.66
CDH13-210ENST00000567445 CEP95Q96GE4 821 aa10.93□□□□□ -0.66
CDH13-210ENST00000567445 MTMR4Q9NYA4 1195 aa10.93□□□□□ -0.66
CDH13-210ENST00000567445 ATP11BQ9Y2G3 1177 aa10.93□□□□□ -0.66
CDH13-210ENST00000567445 PLXNA1Q9UIW2 1896 aa10.93□□□□□ -0.66
CDH13-210ENST00000567445 MYH4Q9Y623 1939 aa10.93□□□□□ -0.66
CDH13-210ENST00000567445 ATP2A1O14983 1001 aa10.93□□□□□ -0.66
CDH13-210ENST00000567445 TTLL1O95922 423 aa10.93□□□□□ -0.66
CDH13-210ENST00000567445 MX1P20591 662 aa10.93□□□□□ -0.66
CDH13-210ENST00000567445 ADCYAP1R1P41586 468 aa10.93□□□□□ -0.66
CDH13-210ENST00000567445 PDE4BQ07343 736 aa10.93□□□□□ -0.66
CDH13-210ENST00000567445 C1orf53Q5VUE5 145 aa10.93□□□□□ -0.66
CDH13-210ENST00000567445 MSL3Q8N5Y2 521 aaKnown RBP10.93□□□□□ -0.66
CDH13-210ENST00000567445 GMCL1P1Q8NEA9 526 aa10.93□□□□□ -0.66
CDH13-210ENST00000567445 OTUD7AQ8TE49 926 aaPredicted RBP10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms