RNA–Protein interactions for RNA: ENST00000566243.5

EDC3-211, Transcript of enhancer of mRNA decapping 3, humanhuman

TSL 3

Gene EDC3, Length 711 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDC3-211ENST00000566243 CREB3L3Q68CJ9 461 aa22.36■■□□□ 1.17
EDC3-211ENST00000566243 CASC1Q6TDU7 716 aa22.36■■□□□ 1.17
EDC3-211ENST00000566243 CHST3Q7LGC8 479 aa22.36■■□□□ 1.17
EDC3-211ENST00000566243 MB21D2Q8IYB1 491 aaPredicted RBP22.36■■□□□ 1.17
EDC3-211ENST00000566243 MAML3Q96JK9 1138 aa22.36■■□□□ 1.17
EDC3-211ENST00000566243 CRISPLD2Q9H0B8 497 aa22.36■■□□□ 1.17
EDC3-211ENST00000566243 HOMER2Q9NSB8 354 aa22.36■■□□□ 1.17
EDC3-211ENST00000566243 COL11A1P12107 1806 aaPredicted RBP22.36■■□□□ 1.17
EDC3-211ENST00000566243 ZNF236Q9UL36 1845 aa22.36■■□□□ 1.17
EDC3-211ENST00000566243 ANTXR2P58335 489 aa22.35■■□□□ 1.17
EDC3-211ENST00000566243 COL9A3Q14050 684 aaPredicted RBP22.35■■□□□ 1.17
EDC3-211ENST00000566243 DHX30Q7L2E3 1194 aaKnown RBP eCLIP22.35■■□□□ 1.17
EDC3-211ENST00000566243 CHST13Q8NET6 341 aa22.35■■□□□ 1.17
EDC3-211ENST00000566243 CPVLQ9H3G5 476 aa22.35■■□□□ 1.17
EDC3-211ENST00000566243 SENP2Q9HC62 589 aa22.35■■□□□ 1.17
EDC3-211ENST00000566243 SLC5A4Q9NY91 659 aa22.35■■□□□ 1.17
EDC3-211ENST00000566243 IFIT3O14879 490 aaKnown RBP22.34■■□□□ 1.17
EDC3-211ENST00000566243 GPATCH4Q5T3I0 446 aaKnown RBP22.34■■□□□ 1.17
EDC3-211ENST00000566243 TRPV1Q8NER1 839 aa22.34■■□□□ 1.17
EDC3-211ENST00000566243 RNF146Q9NTX7 359 aa22.34■■□□□ 1.17
EDC3-211ENST00000566243 FBXO40Q9UH90 709 aa22.34■■□□□ 1.17
EDC3-211ENST00000566243 DNAJC25-GNG10A0A024R161 153 aa22.33■■□□□ 1.17
EDC3-211ENST00000566243 TFRCP02786 760 aaKnown RBP22.33■■□□□ 1.17
EDC3-211ENST00000566243 UBE2Q1Q7Z7E8 422 aa22.33■■□□□ 1.17
EDC3-211ENST00000566243 UBA5Q9GZZ9 404 aa22.33■■□□□ 1.17
EDC3-211ENST00000566243 CCPG1Q9ULG6 757 aa22.33■■□□□ 1.17
EDC3-211ENST00000566243 DIS3Q9Y2L1 958 aaKnown RBP22.33■■□□□ 1.17
EDC3-211ENST00000566243 TNRC18O15417 2968 aaPredicted RBP22.32■■□□□ 1.16
EDC3-211ENST00000566243 ICAM1P05362 532 aa22.32■■□□□ 1.16
EDC3-211ENST00000566243 ALAS1P13196 640 aa22.32■■□□□ 1.16
EDC3-211ENST00000566243 TKFCQ3LXA3 575 aa22.32■■□□□ 1.16
EDC3-211ENST00000566243 ANKRD35Q8N283 1001 aa22.32■■□□□ 1.16
EDC3-211ENST00000566243 DDX11Q96FC9 970 aa22.32■■□□□ 1.16
EDC3-211ENST00000566243 TRERF1Q96PN7 1200 aa22.32■■□□□ 1.16
EDC3-211ENST00000566243 ACAD9Q9H845 621 aa22.32■■□□□ 1.16
EDC3-211ENST00000566243 CYBAP13498 195 aa22.31■■□□□ 1.16
EDC3-211ENST00000566243 ASPRV1Q53RT3 343 aa22.31■■□□□ 1.16
EDC3-211ENST00000566243 MUM1L1Q5H9M0 696 aa22.31■■□□□ 1.16
EDC3-211ENST00000566243 PRAMEF19Q5SWL8 479 aa22.31■■□□□ 1.16
EDC3-211ENST00000566243 LHX8Q68G74 356 aa22.31■■□□□ 1.16
EDC3-211ENST00000566243 IGDCC4Q8TDY8 1250 aa22.31■■□□□ 1.16
EDC3-211ENST00000566243 GPHNQ9NQX3 736 aaPredicted RBP22.31■■□□□ 1.16
EDC3-211ENST00000566243 PARP1P09874 1014 aaKnown RBP22.3■■□□□ 1.16
EDC3-211ENST00000566243 WTAPQ15007 396 aa22.3■■□□□ 1.16
EDC3-211ENST00000566243 TMEM67Q5HYA8 995 aa22.3■■□□□ 1.16
EDC3-211ENST00000566243 STAG2Q8N3U4 1231 aa22.3■■□□□ 1.16
EDC3-211ENST00000566243 FGD4Q96M96 766 aa22.3■■□□□ 1.16
EDC3-211ENST00000566243 TINF2Q9BSI4 451 aa22.3■■□□□ 1.16
EDC3-211ENST00000566243 A1CFQ9NQ94 594 aaKnown RBP22.3■■□□□ 1.16
EDC3-211ENST00000566243 OGDHLQ9ULD0 1010 aa22.3■■□□□ 1.16
EDC3-211ENST00000566243 ERICH2A1L162 156 aa22.29■■□□□ 1.16
EDC3-211ENST00000566243 PRC1O43663 620 aa22.29■■□□□ 1.16
EDC3-211ENST00000566243 FARP2O94887 1054 aaPredicted RBP22.29■■□□□ 1.16
EDC3-211ENST00000566243 SART3Q15020 963 aaKnown RBP22.29■■□□□ 1.16
EDC3-211ENST00000566243 RASEFQ8IZ41 740 aa22.29■■□□□ 1.16
EDC3-211ENST00000566243 CAPN2P17655 700 aa22.28■■□□□ 1.16
EDC3-211ENST00000566243 CNGA1P29973 690 aa22.28■■□□□ 1.16
EDC3-211ENST00000566243 MNX1P50219 401 aaPredicted RBP22.28■■□□□ 1.16
EDC3-211ENST00000566243 ADGRF4Q8IZF3 695 aa22.28■■□□□ 1.16
EDC3-211ENST00000566243 DDX20Q9UHI6 824 aaKnown RBP22.28■■□□□ 1.16
EDC3-211ENST00000566243 MAD2L2Q9UI95 211 aa22.28■■□□□ 1.16
EDC3-211ENST00000566243 MCM5P33992 734 aa22.27■■□□□ 1.16
EDC3-211ENST00000566243 CNTN2Q02246 1040 aa22.27■■□□□ 1.16
EDC3-211ENST00000566243 TROAPQ12815 778 aa22.27■■□□□ 1.16
EDC3-211ENST00000566243 RNF20Q5VTR2 975 aa22.27■■□□□ 1.16
EDC3-211ENST00000566243 FAM133AQ8N9E0 248 aa22.27■■□□□ 1.16
EDC3-211ENST00000566243 DIS3LQ8TF46 1054 aaKnown RBP22.27■■□□□ 1.16
EDC3-211ENST00000566243 JMJD4Q9H9V9 463 aa22.27■■□□□ 1.16
EDC3-211ENST00000566243 LY9Q9HBG7 655 aa22.27■■□□□ 1.16
EDC3-211ENST00000566243 WDR19Q8NEZ3 1342 aa22.27■■□□□ 1.16
EDC3-211ENST00000566243 PALM3A6NDB9 673 aaPredicted RBP22.26■■□□□ 1.15
EDC3-211ENST00000566243 POTEB2H3BUK9 544 aa22.26■■□□□ 1.15
EDC3-211ENST00000566243 NFIBO00712 420 aa22.26■■□□□ 1.15
EDC3-211ENST00000566243 SH2B2O14492 632 aaPredicted RBP22.26■■□□□ 1.15
EDC3-211ENST00000566243 GRM4Q14833 912 aa22.26■■□□□ 1.15
EDC3-211ENST00000566243 CDC37Q16543 378 aaPredicted RBP22.26■■□□□ 1.15
EDC3-211ENST00000566243 SLC35G1Q2M3R5 365 aa22.26■■□□□ 1.15
EDC3-211ENST00000566243 MAMDC4Q6UXC1 1216 aa22.26■■□□□ 1.15
EDC3-211ENST00000566243 ZNF467Q7Z7K2 595 aaPredicted RBP22.26■■□□□ 1.15
EDC3-211ENST00000566243 CLEC4DQ8WXI8 215 aa22.26■■□□□ 1.15
EDC3-211ENST00000566243 CYP39A1Q9NYL5 469 aa22.26■■□□□ 1.15
EDC3-211ENST00000566243 KLRF2D3W0D1 207 aa22.25■■□□□ 1.15
EDC3-211ENST00000566243 SNAI1O95863 264 aaPredicted RBP22.25■■□□□ 1.15
EDC3-211ENST00000566243 TSGA10IPQ3SY00 556 aa22.25■■□□□ 1.15
EDC3-211ENST00000566243 NSMFQ6X4W1 530 aa22.25■■□□□ 1.15
EDC3-211ENST00000566243 MSL3Q8N5Y2 521 aaKnown RBP22.25■■□□□ 1.15
EDC3-211ENST00000566243 ANKLE1Q8NAG6 615 aa22.25■■□□□ 1.15
EDC3-211ENST00000566243 PAWRQ96IZ0 340 aaKnown RBP22.25■■□□□ 1.15
EDC3-211ENST00000566243 MTA3Q9BTC8 594 aa22.25■■□□□ 1.15
EDC3-211ENST00000566243 VAT1LQ9HCJ6 419 aa22.25■■□□□ 1.15
EDC3-211ENST00000566243 NRBP1Q9UHY1 535 aa22.25■■□□□ 1.15
EDC3-211ENST00000566243 PFASO15067 1338 aa22.25■■□□□ 1.15
EDC3-211ENST00000566243 SOWAHBA6NEL2 793 aa22.24■■□□□ 1.15
EDC3-211ENST00000566243 SEPT4O43236 478 aa22.24■■□□□ 1.15
EDC3-211ENST00000566243 ZNF865P0CJ78 1059 aaPredicted RBP22.24■■□□□ 1.15
EDC3-211ENST00000566243 QRICH1Q2TAL8 776 aa22.24■■□□□ 1.15
EDC3-211ENST00000566243 ADCK5Q3MIX3 580 aa22.24■■□□□ 1.15
EDC3-211ENST00000566243 USH1GQ495M9 461 aa22.24■■□□□ 1.15
EDC3-211ENST00000566243 ANO1Q5XXA6 986 aa22.24■■□□□ 1.15
EDC3-211ENST00000566243 CATIPQ7Z7H3 387 aa22.24■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms