RNA–Protein interactions for RNA: ENST00000561266.5

TPM1-230, Transcript of tropomyosin 1, humanhuman

TSL 3

Gene TPM1, Length 671 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-230ENST00000561266 TMEM67Q5HYA8 995 aa16.28■□□□□ 0.2
TPM1-230ENST00000561266 MAP3K21Q5TCX8 1036 aa16.28■□□□□ 0.2
TPM1-230ENST00000561266 SHISA4Q96DD7 197 aa16.28■□□□□ 0.2
TPM1-230ENST00000561266 FGD4Q96M96 766 aa16.28■□□□□ 0.2
TPM1-230ENST00000561266 MMP19Q99542 508 aa16.28■□□□□ 0.2
TPM1-230ENST00000561266 MYL10Q9BUA6 226 aa16.28■□□□□ 0.2
TPM1-230ENST00000561266 HOMER2Q9NSB8 354 aa16.28■□□□□ 0.2
TPM1-230ENST00000561266 MAD2L2Q9UI95 211 aa16.28■□□□□ 0.2
TPM1-230ENST00000561266 SNX14Q9Y5W7 946 aa16.28■□□□□ 0.2
TPM1-230ENST00000561266 IVNS1ABPQ9Y6Y0 642 aa16.28■□□□□ 0.2
TPM1-230ENST00000561266 SH2B2O14492 632 aaPredicted RBP16.27■□□□□ 0.2
TPM1-230ENST00000561266 HMGCRP04035 888 aa16.27■□□□□ 0.2
TPM1-230ENST00000561266 FCER1AP12319 257 aa16.27■□□□□ 0.2
TPM1-230ENST00000561266 CYP2C19P33261 490 aa16.27■□□□□ 0.2
TPM1-230ENST00000561266 OAZ1P54368 228 aa16.27■□□□□ 0.2
TPM1-230ENST00000561266 EXOSC10Q01780 885 aaKnown RBP16.27■□□□□ 0.2
TPM1-230ENST00000561266 TROAPQ12815 778 aa16.27■□□□□ 0.2
TPM1-230ENST00000561266 WTAPQ15007 396 aa16.27■□□□□ 0.2
TPM1-230ENST00000561266 ZNF792Q3KQV3 632 aa16.27■□□□□ 0.2
TPM1-230ENST00000561266 ABRAQ8N0Z2 381 aa16.27■□□□□ 0.2
TPM1-230ENST00000561266 TRPV1Q8NER1 839 aa16.27■□□□□ 0.2
TPM1-230ENST00000561266 USP26Q9BXU7 913 aa16.27■□□□□ 0.2
TPM1-230ENST00000561266 RNF208Q9H0X6 261 aa16.27■□□□□ 0.2
TPM1-230ENST00000561266 DNAJC25-GNG10A0A024R161 153 aa16.26■□□□□ 0.19
TPM1-230ENST00000561266 PALM3A6NDB9 673 aaPredicted RBP16.26■□□□□ 0.19
TPM1-230ENST00000561266 ALAS1P13196 640 aa16.26■□□□□ 0.19
TPM1-230ENST00000561266 ZKSCAN1P17029 563 aaPredicted RBP16.26■□□□□ 0.19
TPM1-230ENST00000561266 CCND3P30281 292 aaPredicted RBP16.26■□□□□ 0.19
TPM1-230ENST00000561266 MCM5P33992 734 aa16.26■□□□□ 0.19
TPM1-230ENST00000561266 PRAMEF19Q5SWL8 479 aa16.26■□□□□ 0.19
TPM1-230ENST00000561266 DPP9Q86TI2 863 aa16.26■□□□□ 0.19
TPM1-230ENST00000561266 RAB11FIP4Q86YS3 637 aa16.26■□□□□ 0.19
TPM1-230ENST00000561266 ADGRF4Q8IZF3 695 aa16.26■□□□□ 0.19
TPM1-230ENST00000561266 PURBQ96QR8 312 aaKnown RBP16.26■□□□□ 0.19
TPM1-230ENST00000561266 RNF146Q9NTX7 359 aa16.26■□□□□ 0.19
TPM1-230ENST00000561266 CTDP1Q9Y5B0 961 aaPredicted RBP16.26■□□□□ 0.19
TPM1-230ENST00000561266 DDX49Q9Y6V7 483 aaKnown RBP16.26■□□□□ 0.19
TPM1-230ENST00000561266 FRMPD3Q5JV73 1810 aa16.26■□□□□ 0.19
TPM1-230ENST00000561266 TNRC18O15417 2968 aaPredicted RBP16.25■□□□□ 0.19
TPM1-230ENST00000561266 SEC24BO95487 1268 aa16.25■□□□□ 0.19
TPM1-230ENST00000561266 ICAM1P05362 532 aa16.25■□□□□ 0.19
TPM1-230ENST00000561266 PARP1P09874 1014 aaKnown RBP16.25■□□□□ 0.19
TPM1-230ENST00000561266 FDX1P10109 184 aa16.25■□□□□ 0.19
TPM1-230ENST00000561266 PRKAR2AP13861 404 aaKnown RBP16.25■□□□□ 0.19
TPM1-230ENST00000561266 UBXN2AP68543 259 aa16.25■□□□□ 0.19
TPM1-230ENST00000561266 GRM4Q14833 912 aa16.25■□□□□ 0.19
TPM1-230ENST00000561266 ASPRV1Q53RT3 343 aa16.25■□□□□ 0.19
TPM1-230ENST00000561266 GPATCH4Q5T3I0 446 aaKnown RBP16.25■□□□□ 0.19
TPM1-230ENST00000561266 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.25■□□□□ 0.19
TPM1-230ENST00000561266 MAML3Q96JK9 1138 aa16.25■□□□□ 0.19
TPM1-230ENST00000561266 TRERF1Q96PN7 1200 aa16.25■□□□□ 0.19
TPM1-230ENST00000561266 NEK1Q96PY6 1258 aa16.25■□□□□ 0.19
TPM1-230ENST00000561266 JMJD4Q9H9V9 463 aa16.25■□□□□ 0.19
TPM1-230ENST00000561266 VAT1LQ9HCJ6 419 aa16.25■□□□□ 0.19
TPM1-230ENST00000561266 PAK6Q9NQU5 681 aaPredicted RBP16.25■□□□□ 0.19
TPM1-230ENST00000561266 CCPG1Q9ULG6 757 aa16.25■□□□□ 0.19
TPM1-230ENST00000561266 ASTN1O14525 1302 aa16.24■□□□□ 0.19
TPM1-230ENST00000561266 KLRF2D3W0D1 207 aa16.24■□□□□ 0.19
TPM1-230ENST00000561266 CYTH3O43739 400 aa16.24■□□□□ 0.19
TPM1-230ENST00000561266 RXRAP19793 462 aa16.24■□□□□ 0.19
TPM1-230ENST00000561266 CNTN2Q02246 1040 aa16.24■□□□□ 0.19
TPM1-230ENST00000561266 RNF20Q5VTR2 975 aa16.24■□□□□ 0.19
TPM1-230ENST00000561266 ZNF654Q8IZM8 581 aa16.24■□□□□ 0.19
TPM1-230ENST00000561266 CHST13Q8NET6 341 aa16.24■□□□□ 0.19
TPM1-230ENST00000561266 CLEC4DQ8WXI8 215 aa16.24■□□□□ 0.19
TPM1-230ENST00000561266 TMEM106CQ9BVX2 250 aa16.24■□□□□ 0.19
TPM1-230ENST00000561266 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.24■□□□□ 0.19
TPM1-230ENST00000561266 A1CFQ9NQ94 594 aaKnown RBP16.24■□□□□ 0.19
TPM1-230ENST00000561266 RPTORQ8N122 1335 aa16.23■□□□□ 0.19
TPM1-230ENST00000561266 ERICH2A1L162 156 aa16.23■□□□□ 0.19
TPM1-230ENST00000561266 NFIBO00712 420 aa16.23■□□□□ 0.19
TPM1-230ENST00000561266 PPP1R11O60927 126 aaPredicted RBP16.23■□□□□ 0.19
TPM1-230ENST00000561266 REC8O95072 547 aa16.23■□□□□ 0.19
TPM1-230ENST00000561266 GJB1P08034 283 aa16.23■□□□□ 0.19
TPM1-230ENST00000561266 COPB2P35606 906 aa16.23■□□□□ 0.19
TPM1-230ENST00000561266 KCTD2Q14681 263 aa16.23■□□□□ 0.19
TPM1-230ENST00000561266 CDC37Q16543 378 aaPredicted RBP16.23■□□□□ 0.19
TPM1-230ENST00000561266 OLFML2BQ68BL8 750 aa16.23■□□□□ 0.19
TPM1-230ENST00000561266 TBC1D5Q92609 795 aa16.23■□□□□ 0.19
TPM1-230ENST00000561266 MTMR8Q96EF0 704 aa16.23■□□□□ 0.19
TPM1-230ENST00000561266 TMEM87BQ96K49 555 aa16.23■□□□□ 0.19
TPM1-230ENST00000561266 DEFB118Q96PH6 123 aa16.23■□□□□ 0.19
TPM1-230ENST00000561266 BRPF3Q9ULD4 1205 aa16.23■□□□□ 0.19
TPM1-230ENST00000561266 SOWAHBA6NEL2 793 aa16.22■□□□□ 0.19
TPM1-230ENST00000561266 GJA8P48165 433 aa16.22■□□□□ 0.19
TPM1-230ENST00000561266 SART3Q15020 963 aaKnown RBP16.22■□□□□ 0.19
TPM1-230ENST00000561266 QRICH1Q2TAL8 776 aa16.22■□□□□ 0.19
TPM1-230ENST00000561266 DHX32Q7L7V1 743 aaKnown RBP16.22■□□□□ 0.19
TPM1-230ENST00000561266 CMTR1Q8N1G2 835 aaKnown RBP16.22■□□□□ 0.19
TPM1-230ENST00000561266 U2AF1L4Q8WU68 220 aaKnown RBP16.22■□□□□ 0.19
TPM1-230ENST00000561266 NUP133Q8WUM0 1156 aa16.22■□□□□ 0.19
TPM1-230ENST00000561266 JAKMIP1Q96N16 626 aaKnown RBP16.22■□□□□ 0.19
TPM1-230ENST00000561266 MTA3Q9BTC8 594 aa16.22■□□□□ 0.19
TPM1-230ENST00000561266 ACAD9Q9H845 621 aa16.22■□□□□ 0.19
TPM1-230ENST00000561266 PLEKHA8P1O95397 391 aa16.21■□□□□ 0.19
TPM1-230ENST00000561266 SGPL1O95470 568 aa16.21■□□□□ 0.19
TPM1-230ENST00000561266 CYBAP13498 195 aa16.21■□□□□ 0.19
TPM1-230ENST00000561266 LIFRP42702 1097 aa16.21■□□□□ 0.19
TPM1-230ENST00000561266 TKFCQ3LXA3 575 aa16.21■□□□□ 0.19
TPM1-230ENST00000561266 USH1GQ495M9 461 aa16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms