RNA–Protein interactions for RNA: ENST00000559849.5

CHRNB4-204, Transcript of cholinergic receptor nicotinic beta 4 subunit, humanhuman

TSL 1 (best)

Gene CHRNB4, Length 2,080 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB4-204ENST00000559849 CATIPQ7Z7H3 387 aa15.96■□□□□ 0.15
CHRNB4-204ENST00000559849 SENP2Q9HC62 589 aa15.96■□□□□ 0.15
CHRNB4-204ENST00000559849 ICAM1P05362 532 aa15.96■□□□□ 0.15
CHRNB4-204ENST00000559849 HMGB1P09429 215 aaKnown RBP15.96■□□□□ 0.15
CHRNB4-204ENST00000559849 SOX10P56693 466 aa15.96■□□□□ 0.15
CHRNB4-204ENST00000559849 SNAP25P60880 206 aa15.96■□□□□ 0.15
CHRNB4-204ENST00000559849 TROAPQ12815 778 aa15.96■□□□□ 0.15
CHRNB4-204ENST00000559849 CCL14Q16627 93 aa15.96■□□□□ 0.15
CHRNB4-204ENST00000559849 UBA5Q9GZZ9 404 aa15.96■□□□□ 0.15
CHRNB4-204ENST00000559849 LY9Q9HBG7 655 aa15.96■□□□□ 0.15
CHRNB4-204ENST00000559849 PNMA2Q9UL42 364 aa15.96■□□□□ 0.15
CHRNB4-204ENST00000559849 ZNF236Q9UL36 1845 aa15.95■□□□□ 0.14
CHRNB4-204ENST00000559849 COBLO75128 1261 aa15.95■□□□□ 0.14
CHRNB4-204ENST00000559849 CCL5P13501 91 aa15.95■□□□□ 0.14
CHRNB4-204ENST00000559849 LIFRP42702 1097 aa15.95■□□□□ 0.14
CHRNB4-204ENST00000559849 COL9A3Q14050 684 aaPredicted RBP15.95■□□□□ 0.14
CHRNB4-204ENST00000559849 ADCK5Q3MIX3 580 aa15.95■□□□□ 0.14
CHRNB4-204ENST00000559849 DHX32Q7L7V1 743 aaKnown RBP15.95■□□□□ 0.14
CHRNB4-204ENST00000559849 NPLOC4Q8TAT6 608 aa15.95■□□□□ 0.14
CHRNB4-204ENST00000559849 DDX11Q96FC9 970 aa15.95■□□□□ 0.14
CHRNB4-204ENST00000559849 USP26Q9BXU7 913 aa15.95■□□□□ 0.14
CHRNB4-204ENST00000559849 RNF208Q9H0X6 261 aa15.95■□□□□ 0.14
CHRNB4-204ENST00000559849 SMCHD1A6NHR9 2005 aa15.95■□□□□ 0.14
CHRNB4-204ENST00000559849 KLRF2D3W0D1 207 aa15.95■□□□□ 0.14
CHRNB4-204ENST00000559849 SH2B2O14492 632 aaPredicted RBP15.95■□□□□ 0.14
CHRNB4-204ENST00000559849 ALAS1P13196 640 aa15.95■□□□□ 0.14
CHRNB4-204ENST00000559849 DHX30Q7L2E3 1194 aaKnown RBP eCLIP15.95■□□□□ 0.14
CHRNB4-204ENST00000559849 ADGRF4Q8IZF3 695 aa15.95■□□□□ 0.14
CHRNB4-204ENST00000559849 ANKRD35Q8N283 1001 aa15.95■□□□□ 0.14
CHRNB4-204ENST00000559849 TRERF1Q96PN7 1200 aa15.95■□□□□ 0.14
CHRNB4-204ENST00000559849 HOMER2Q9NSB8 354 aa15.95■□□□□ 0.14
CHRNB4-204ENST00000559849 MAD2L2Q9UI95 211 aa15.95■□□□□ 0.14
CHRNB4-204ENST00000559849 CCPG1Q9ULG6 757 aa15.95■□□□□ 0.14
CHRNB4-204ENST00000559849 WDR19Q8NEZ3 1342 aa15.94■□□□□ 0.14
CHRNB4-204ENST00000559849 PALM3A6NDB9 673 aaPredicted RBP15.94■□□□□ 0.14
CHRNB4-204ENST00000559849 EXOSC10Q01780 885 aaKnown RBP15.94■□□□□ 0.14
CHRNB4-204ENST00000559849 MFSD14CQ5VZR4 134 aa15.94■□□□□ 0.14
CHRNB4-204ENST00000559849 STAG2Q8N3U4 1231 aa15.94■□□□□ 0.14
CHRNB4-204ENST00000559849 MAP3K14Q99558 947 aa15.94■□□□□ 0.14
CHRNB4-204ENST00000559849 CPVLQ9H3G5 476 aa15.94■□□□□ 0.14
CHRNB4-204ENST00000559849 ACAD9Q9H845 621 aa15.94■□□□□ 0.14
CHRNB4-204ENST00000559849 GPHNQ9NQX3 736 aaPredicted RBP15.94■□□□□ 0.14
CHRNB4-204ENST00000559849 DIS3Q9Y2L1 958 aaKnown RBP15.94■□□□□ 0.14
CHRNB4-204ENST00000559849 SNX14Q9Y5W7 946 aa15.94■□□□□ 0.14
CHRNB4-204ENST00000559849 RPTORQ8N122 1335 aa15.93■□□□□ 0.14
CHRNB4-204ENST00000559849 CCDC69A6NI79 296 aa15.93■□□□□ 0.14
CHRNB4-204ENST00000559849 EIF5BO60841 1220 aaKnown RBP15.93■□□□□ 0.14
CHRNB4-204ENST00000559849 PGK2P07205 417 aa15.93■□□□□ 0.14
CHRNB4-204ENST00000559849 GJB1P08034 283 aa15.93■□□□□ 0.14
CHRNB4-204ENST00000559849 RGS19P49795 217 aa15.93■□□□□ 0.14
CHRNB4-204ENST00000559849 GRM4Q14833 912 aa15.93■□□□□ 0.14
CHRNB4-204ENST00000559849 OLFML2BQ68BL8 750 aa15.93■□□□□ 0.14
CHRNB4-204ENST00000559849 NFXL1Q6ZNB6 911 aa15.93■□□□□ 0.14
CHRNB4-204ENST00000559849 UNC93B1Q9H1C4 597 aa15.93■□□□□ 0.14
CHRNB4-204ENST00000559849 HMX1Q9NP08 348 aaPredicted RBP15.93■□□□□ 0.14
CHRNB4-204ENST00000559849 RNF146Q9NTX7 359 aa15.93■□□□□ 0.14
CHRNB4-204ENST00000559849 FLRT1Q9NZU1 646 aa15.93■□□□□ 0.14
CHRNB4-204ENST00000559849 POTEFA5A3E0 1075 aa15.93■□□□□ 0.14
CHRNB4-204ENST00000559849 DHX16O60231 1041 aaKnown RBP15.93■□□□□ 0.14
CHRNB4-204ENST00000559849 CACNB2Q08289 660 aaPredicted RBP15.93■□□□□ 0.14
CHRNB4-204ENST00000559849 TRIM32Q13049 653 aa15.93■□□□□ 0.14
CHRNB4-204ENST00000559849 MAP3K21Q5TCX8 1036 aa15.93■□□□□ 0.14
CHRNB4-204ENST00000559849 ZNF654Q8IZM8 581 aa15.93■□□□□ 0.14
CHRNB4-204ENST00000559849 LRRC2Q9BYS8 371 aa15.93■□□□□ 0.14
CHRNB4-204ENST00000559849 VAT1LQ9HCJ6 419 aa15.93■□□□□ 0.14
CHRNB4-204ENST00000559849 BAZ2BQ9UIF8 2168 aaKnown RBP15.92■□□□□ 0.14
CHRNB4-204ENST00000559849 DDAH1O94760 285 aa15.92■□□□□ 0.14
CHRNB4-204ENST00000559849 PRKAR2AP13861 404 aaKnown RBP15.92■□□□□ 0.14
CHRNB4-204ENST00000559849 PSMA5P28066 241 aa15.92■□□□□ 0.14
CHRNB4-204ENST00000559849 ZNF792Q3KQV3 632 aa15.92■□□□□ 0.14
CHRNB4-204ENST00000559849 SGMS1Q86VZ5 419 aa15.92■□□□□ 0.14
CHRNB4-204ENST00000559849 NUP133Q8WUM0 1156 aa15.92■□□□□ 0.14
CHRNB4-204ENST00000559849 MAML3Q96JK9 1138 aa15.92■□□□□ 0.14
CHRNB4-204ENST00000559849 SLC12A7Q9Y666 1083 aa15.92■□□□□ 0.14
CHRNB4-204ENST00000559849 RBBP6Q7Z6E9 1792 aaKnown RBP15.92■□□□□ 0.14
CHRNB4-204ENST00000559849 PLXNA1Q9UIW2 1896 aa15.92■□□□□ 0.14
CHRNB4-204ENST00000559849 DNAJC25-GNG10A0A024R161 153 aa15.91■□□□□ 0.14
CHRNB4-204ENST00000559849 IGHA2P01877 340 aa15.91■□□□□ 0.14
CHRNB4-204ENST00000559849 JAKMIP1Q96N16 626 aaKnown RBP15.91■□□□□ 0.14
CHRNB4-204ENST00000559849 JMJD4Q9H9V9 463 aa15.91■□□□□ 0.14
CHRNB4-204ENST00000559849 PAK6Q9NQU5 681 aaPredicted RBP15.91■□□□□ 0.14
CHRNB4-204ENST00000559849 MYH6P13533 1939 aa15.91■□□□□ 0.14
CHRNB4-204ENST00000559849 CALM1P0DP23 149 aa15.91■□□□□ 0.14
CHRNB4-204ENST00000559849 CALM2P0DP24 149 aa15.91■□□□□ 0.14
CHRNB4-204ENST00000559849 CALM3P0DP25 149 aa15.91■□□□□ 0.14
CHRNB4-204ENST00000559849 KIF5BP33176 963 aa15.91■□□□□ 0.14
CHRNB4-204ENST00000559849 CYP2C19P33261 490 aa15.91■□□□□ 0.14
CHRNB4-204ENST00000559849 CDC37Q16543 378 aaPredicted RBP15.91■□□□□ 0.14
CHRNB4-204ENST00000559849 CTCFLQ8NI51 663 aaPredicted RBP15.91■□□□□ 0.14
CHRNB4-204ENST00000559849 XRN2Q9H0D6 950 aaKnown RBP eCLIP15.91■□□□□ 0.14
CHRNB4-204ENST00000559849 CAPN2P17655 700 aa15.9■□□□□ 0.14
CHRNB4-204ENST00000559849 EN2P19622 333 aaPredicted RBP15.9■□□□□ 0.14
CHRNB4-204ENST00000559849 GJA8P48165 433 aa15.9■□□□□ 0.14
CHRNB4-204ENST00000559849 MUM1L1Q5H9M0 696 aa15.9■□□□□ 0.14
CHRNB4-204ENST00000559849 BLOC1S2Q6QNY1 142 aa15.9■□□□□ 0.14
CHRNB4-204ENST00000559849 SYNE3Q6ZMZ3 975 aa15.9■□□□□ 0.14
CHRNB4-204ENST00000559849 TCEANC2Q96MN5 208 aa15.9■□□□□ 0.14
CHRNB4-204ENST00000559849 TINF2Q9BSI4 451 aa15.9■□□□□ 0.14
CHRNB4-204ENST00000559849 RIOX1Q9H6W3 641 aa15.9■□□□□ 0.14
CHRNB4-204ENST00000559849 A1CFQ9NQ94 594 aaKnown RBP15.9■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms