RNA–Protein interactions for RNA: ENST00000558471.5

LRRC28-206, Transcript of leucine rich repeat containing 28, humanhuman

TSL 3

Gene LRRC28, Length 793 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-206ENST00000558471 RPS6KB1P23443 525 aa14.57□□□□□ -0.08
LRRC28-206ENST00000558471 GRK4P32298 578 aa14.57□□□□□ -0.08
LRRC28-206ENST00000558471 COPB2P35606 906 aa14.57□□□□□ -0.08
LRRC28-206ENST00000558471 MAP2K5Q13163 448 aa14.57□□□□□ -0.08
LRRC28-206ENST00000558471 SLC9C1Q4G0N8 1177 aa14.57□□□□□ -0.08
LRRC28-206ENST00000558471 Q6ZUG5 572 aa14.57□□□□□ -0.08
LRRC28-206ENST00000558471 SGMS1Q86VZ5 419 aa14.57□□□□□ -0.08
LRRC28-206ENST00000558471 SH3TC2Q8TF17 1288 aa14.57□□□□□ -0.08
LRRC28-206ENST00000558471 ZSWIM6Q9HCJ5 1215 aa14.57□□□□□ -0.08
LRRC28-206ENST00000558471 VAT1LQ9HCJ6 419 aa14.57□□□□□ -0.08
LRRC28-206ENST00000558471 BRPF3Q9ULD4 1205 aa14.57□□□□□ -0.08
LRRC28-206ENST00000558471 SLC12A7Q9Y666 1083 aa14.57□□□□□ -0.08
LRRC28-206ENST00000558471 ICAM1P05362 532 aa14.56□□□□□ -0.08
LRRC28-206ENST00000558471 FCER1AP12319 257 aa14.56□□□□□ -0.08
LRRC28-206ENST00000558471 XRCC5P13010 732 aaKnown RBP14.56□□□□□ -0.08
LRRC28-206ENST00000558471 ALAS1P13196 640 aa14.56□□□□□ -0.08
LRRC28-206ENST00000558471 ELNP15502 786 aa14.56□□□□□ -0.08
LRRC28-206ENST00000558471 TAL1P17542 331 aaPredicted RBP14.56□□□□□ -0.08
LRRC28-206ENST00000558471 RXRAP19793 462 aa14.56□□□□□ -0.08
LRRC28-206ENST00000558471 ADORA2AP29274 412 aa14.56□□□□□ -0.08
LRRC28-206ENST00000558471 RGS2P41220 211 aa14.56□□□□□ -0.08
LRRC28-206ENST00000558471 SLC35G1Q2M3R5 365 aa14.56□□□□□ -0.08
LRRC28-206ENST00000558471 RUFY3Q7L099 469 aa14.56□□□□□ -0.08
LRRC28-206ENST00000558471 NBPF11Q86T75 865 aa14.56□□□□□ -0.08
LRRC28-206ENST00000558471 RAB11FIP4Q86YS3 637 aa14.56□□□□□ -0.08
LRRC28-206ENST00000558471 ABRAQ8N0Z2 381 aa14.56□□□□□ -0.08
LRRC28-206ENST00000558471 PXYLP1Q8TE99 480 aa14.56□□□□□ -0.08
LRRC28-206ENST00000558471 ARMC5Q96C12 935 aa14.56□□□□□ -0.08
LRRC28-206ENST00000558471 MMP19Q99542 508 aa14.56□□□□□ -0.08
LRRC28-206ENST00000558471 MAP3K14Q99558 947 aa14.56□□□□□ -0.08
LRRC28-206ENST00000558471 TM6SF1Q9BZW5 370 aa14.56□□□□□ -0.08
LRRC28-206ENST00000558471 JMJD4Q9H9V9 463 aa14.56□□□□□ -0.08
LRRC28-206ENST00000558471 HOMER2Q9NSB8 354 aa14.56□□□□□ -0.08
LRRC28-206ENST00000558471 PLXNA1Q9UIW2 1896 aa14.56□□□□□ -0.08
LRRC28-206ENST00000558471 HTTP42858 3142 aa14.55□□□□□ -0.08
LRRC28-206ENST00000558471 ZNF236Q9UL36 1845 aa14.55□□□□□ -0.08
LRRC28-206ENST00000558471 DHX16O60231 1041 aaKnown RBP14.55□□□□□ -0.08
LRRC28-206ENST00000558471 COBLO75128 1261 aa14.55□□□□□ -0.08
LRRC28-206ENST00000558471 HOXC6P09630 235 aa14.55□□□□□ -0.08
LRRC28-206ENST00000558471 FGD1P98174 961 aa14.55□□□□□ -0.08
LRRC28-206ENST00000558471 KCTD2Q14681 263 aa14.55□□□□□ -0.08
LRRC28-206ENST00000558471 CDC37Q16543 378 aaPredicted RBP14.55□□□□□ -0.08
LRRC28-206ENST00000558471 DPP9Q86TI2 863 aa14.55□□□□□ -0.08
LRRC28-206ENST00000558471 CCDC144CPQ8IYA2 1237 aa14.55□□□□□ -0.08
LRRC28-206ENST00000558471 SLAIN1Q8ND83 568 aa14.55□□□□□ -0.08
LRRC28-206ENST00000558471 CHST13Q8NET6 341 aa14.55□□□□□ -0.08
LRRC28-206ENST00000558471 CTCFLQ8NI51 663 aaPredicted RBP14.55□□□□□ -0.08
LRRC28-206ENST00000558471 NPLOC4Q8TAT6 608 aa14.55□□□□□ -0.08
LRRC28-206ENST00000558471 TRERF1Q96PN7 1200 aa14.55□□□□□ -0.08
LRRC28-206ENST00000558471 UPF3BQ9BZI7 483 aaKnown RBP14.55□□□□□ -0.08
LRRC28-206ENST00000558471 RNF146Q9NTX7 359 aa14.55□□□□□ -0.08
LRRC28-206ENST00000558471 CCPG1Q9ULG6 757 aa14.55□□□□□ -0.08
LRRC28-206ENST00000558471 CYP46A1Q9Y6A2 500 aa14.55□□□□□ -0.08
LRRC28-206ENST00000558471 CCDC85CA6NKD9 419 aa14.54□□□□□ -0.08
LRRC28-206ENST00000558471 CYTH3O43739 400 aa14.54□□□□□ -0.08
LRRC28-206ENST00000558471 PGK2P07205 417 aa14.54□□□□□ -0.08
LRRC28-206ENST00000558471 CALM1P0DP23 149 aa14.54□□□□□ -0.08
LRRC28-206ENST00000558471 CALM2P0DP24 149 aa14.54□□□□□ -0.08
LRRC28-206ENST00000558471 CALM3P0DP25 149 aa14.54□□□□□ -0.08
LRRC28-206ENST00000558471 KIF5BP33176 963 aa14.54□□□□□ -0.08
LRRC28-206ENST00000558471 ANAPC15P60006 121 aa14.54□□□□□ -0.08
LRRC28-206ENST00000558471 CCL14Q16627 93 aa14.54□□□□□ -0.08
LRRC28-206ENST00000558471 QRICH1Q2TAL8 776 aa14.54□□□□□ -0.08
LRRC28-206ENST00000558471 TKFCQ3LXA3 575 aa14.54□□□□□ -0.08
LRRC28-206ENST00000558471 MUM1L1Q5H9M0 696 aa14.54□□□□□ -0.08
LRRC28-206ENST00000558471 APOA5Q6Q788 366 aa14.54□□□□□ -0.08
LRRC28-206ENST00000558471 SYNE3Q6ZMZ3 975 aa14.54□□□□□ -0.08
LRRC28-206ENST00000558471 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.54□□□□□ -0.08
LRRC28-206ENST00000558471 FBXL16Q8N461 479 aa14.54□□□□□ -0.08
LRRC28-206ENST00000558471 FANCBQ8NB91 859 aa14.54□□□□□ -0.08
LRRC28-206ENST00000558471 TRIB2Q92519 343 aa14.54□□□□□ -0.08
LRRC28-206ENST00000558471 BRF1Q92994 677 aa14.54□□□□□ -0.08
LRRC28-206ENST00000558471 MTMR8Q96EF0 704 aa14.54□□□□□ -0.08
LRRC28-206ENST00000558471 ZNF333Q96JL9 665 aa14.54□□□□□ -0.08
LRRC28-206ENST00000558471 APBA2Q99767 749 aa14.54□□□□□ -0.08
LRRC28-206ENST00000558471 AGXT2Q9BYV1 514 aa14.54□□□□□ -0.08
LRRC28-206ENST00000558471 RIOX1Q9H6W3 641 aa14.54□□□□□ -0.08
LRRC28-206ENST00000558471 ACAD9Q9H845 621 aa14.54□□□□□ -0.08
LRRC28-206ENST00000558471 FLRT1Q9NZU1 646 aa14.54□□□□□ -0.08
LRRC28-206ENST00000558471 BIN2Q9UBW5 565 aaPredicted RBP14.54□□□□□ -0.08
LRRC28-206ENST00000558471 FBXO40Q9UH90 709 aa14.54□□□□□ -0.08
LRRC28-206ENST00000558471 KLF18A0A0U1RQI7 1052 aa14.53□□□□□ -0.08
LRRC28-206ENST00000558471 ZBTB43O43298 467 aa14.53□□□□□ -0.08
LRRC28-206ENST00000558471 MYCP01106 439 aaPredicted RBP14.53□□□□□ -0.08
LRRC28-206ENST00000558471 APOBRQ0VD83 1088 aa14.53□□□□□ -0.08
LRRC28-206ENST00000558471 TRIM32Q13049 653 aa14.53□□□□□ -0.08
LRRC28-206ENST00000558471 MICU3Q86XE3 530 aa14.53□□□□□ -0.08
LRRC28-206ENST00000558471 IL17RAQ96F46 866 aa14.53□□□□□ -0.08
LRRC28-206ENST00000558471 DDX11Q96FC9 970 aa14.53□□□□□ -0.08
LRRC28-206ENST00000558471 DNAJC25-GNG10A0A024R161 153 aa14.52□□□□□ -0.09
LRRC28-206ENST00000558471 PLEKHA8P1O95397 391 aa14.52□□□□□ -0.09
LRRC28-206ENST00000558471 HMGCRP04035 888 aa14.52□□□□□ -0.09
LRRC28-206ENST00000558471 INHAP05111 366 aa14.52□□□□□ -0.09
LRRC28-206ENST00000558471 SMARCA1P28370 1054 aa14.52□□□□□ -0.09
LRRC28-206ENST00000558471 GNAQP50148 359 aa14.52□□□□□ -0.09
LRRC28-206ENST00000558471 TOB2Q14106 344 aaPredicted RBP14.52□□□□□ -0.09
LRRC28-206ENST00000558471 MTFR1Q15390 333 aa14.52□□□□□ -0.09
LRRC28-206ENST00000558471 ZNF792Q3KQV3 632 aa14.52□□□□□ -0.09
LRRC28-206ENST00000558471 USH1GQ495M9 461 aa14.52□□□□□ -0.09
LRRC28-206ENST00000558471 CMTR1Q8N1G2 835 aaKnown RBP14.52□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms