RNA–Protein interactions for RNA: ENST00000558439.5

AP4E1-202, Transcript of adaptor related protein complex 4 subunit epsilon 1, humanhuman

TSL 1 (best)

Gene AP4E1, Length 4,165 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP4E1-202ENST00000558439 TCP11X2Q5H9J9 407 aa17.25■□□□□ 0.35
AP4E1-202ENST00000558439 ADGRG1Q9Y653 693 aa17.25■□□□□ 0.35
AP4E1-202ENST00000558439 DPP8Q6V1X1 898 aaPredicted RBP17.24■□□□□ 0.35
AP4E1-202ENST00000558439 MAATS1Q7Z4T9 603 aa17.24■□□□□ 0.35
AP4E1-202ENST00000558439 RWDD2AQ9UIY3 292 aa17.24■□□□□ 0.35
AP4E1-202ENST00000558439 PFKFB3Q16875 520 aaPredicted RBP17.24■□□□□ 0.35
AP4E1-202ENST00000558439 MRPL44Q9H9J2 332 aaKnown RBP17.24■□□□□ 0.35
AP4E1-202ENST00000558439 DISC1Q9NRI5 854 aa17.24■□□□□ 0.35
AP4E1-202ENST00000558439 TCRBV5S4A2TA0A5A2 114 aa17.24■□□□□ 0.35
AP4E1-202ENST00000558439 C10orf67Q8IYJ2 551 aa17.24■□□□□ 0.35
AP4E1-202ENST00000558439 ACTN4O43707 911 aaKnown RBP17.23■□□□□ 0.35
AP4E1-202ENST00000558439 PLS1Q14651 629 aa17.23■□□□□ 0.35
AP4E1-202ENST00000558439 BRD3Q15059 726 aa17.23■□□□□ 0.35
AP4E1-202ENST00000558439 NSUN4Q96CB9 384 aaKnown RBP17.23■□□□□ 0.35
AP4E1-202ENST00000558439 NUP58Q9BVL2 599 aa17.23■□□□□ 0.35
AP4E1-202ENST00000558439 TMOD2Q9NZR1 351 aa17.23■□□□□ 0.35
AP4E1-202ENST00000558439 SEMA3EO15041 775 aa17.23■□□□□ 0.35
AP4E1-202ENST00000558439 FGFR2P21802 821 aa17.23■□□□□ 0.35
AP4E1-202ENST00000558439 SLC16A2P36021 539 aa17.23■□□□□ 0.35
AP4E1-202ENST00000558439 MRPS25P82663 173 aaKnown RBP17.23■□□□□ 0.35
AP4E1-202ENST00000558439 FAM196AQ6ZSG2 479 aa17.23■□□□□ 0.35
AP4E1-202ENST00000558439 PHF20Q9BVI0 1012 aa17.23■□□□□ 0.35
AP4E1-202ENST00000558439 HAUS4Q9H6D7 363 aa17.23■□□□□ 0.35
AP4E1-202ENST00000558439 SPDYE3A6NKU9 549 aa17.23■□□□□ 0.35
AP4E1-202ENST00000558439 FXR1P51114 621 aaKnown RBP eCLIP17.23■□□□□ 0.35
AP4E1-202ENST00000558439 CACNB1Q02641 598 aaPredicted RBP17.23■□□□□ 0.35
AP4E1-202ENST00000558439 USH1GQ495M9 461 aa17.23■□□□□ 0.35
AP4E1-202ENST00000558439 FOXP2O15409 715 aa17.22■□□□□ 0.35
AP4E1-202ENST00000558439 NTSR2O95665 410 aa17.22■□□□□ 0.35
AP4E1-202ENST00000558439 DOK7Q18PE1 504 aa17.22■□□□□ 0.35
AP4E1-202ENST00000558439 EARS2Q5JPH6 523 aaKnown RBP17.22■□□□□ 0.35
AP4E1-202ENST00000558439 UTP14CQ5TAP6 766 aaKnown RBP17.22■□□□□ 0.35
AP4E1-202ENST00000558439 DHX37Q8IY37 1157 aaKnown RBP17.22■□□□□ 0.35
AP4E1-202ENST00000558439 LZTS2Q9BRK4 669 aa17.22■□□□□ 0.35
AP4E1-202ENST00000558439 MORC2Q9Y6X9 1032 aaPredicted RBP17.22■□□□□ 0.35
AP4E1-202ENST00000558439 BUB1O43683 1085 aa17.22■□□□□ 0.35
AP4E1-202ENST00000558439 NDUFA10O95299 355 aa17.22■□□□□ 0.35
AP4E1-202ENST00000558439 CLEC4GQ6UXB4 293 aa17.22■□□□□ 0.35
AP4E1-202ENST00000558439 MARCH10Q8NA82 808 aaPredicted RBP17.22■□□□□ 0.35
AP4E1-202ENST00000558439 RBM17Q96I25 401 aaKnown RBP17.22■□□□□ 0.35
AP4E1-202ENST00000558439 KIAA0754O94854 1291 aa17.22■□□□□ 0.35
AP4E1-202ENST00000558439 RAD9BQ6WBX8 426 aa17.22■□□□□ 0.35
AP4E1-202ENST00000558439 SYCP3Q8IZU3 236 aa17.22■□□□□ 0.35
AP4E1-202ENST00000558439 TMEM47Q9BQJ4 181 aa17.22■□□□□ 0.35
AP4E1-202ENST00000558439 PODXL2Q9NZ53 605 aa17.22■□□□□ 0.35
AP4E1-202ENST00000558439 SRGAP2O75044 1071 aa17.21■□□□□ 0.35
AP4E1-202ENST00000558439 SLC1A4P43007 532 aa17.21■□□□□ 0.35
AP4E1-202ENST00000558439 WHAMMP3Q1A5X7 153 aa17.21■□□□□ 0.35
AP4E1-202ENST00000558439 CCDC65Q8IXS2 484 aa17.21■□□□□ 0.35
AP4E1-202ENST00000558439 ERMNQ8TAM6 284 aa17.21■□□□□ 0.35
AP4E1-202ENST00000558439 TADA3O75528 432 aa17.21■□□□□ 0.35
AP4E1-202ENST00000558439 CDR1P51861 262 aa17.21■□□□□ 0.35
AP4E1-202ENST00000558439 TUBB4BP68371 445 aa17.21■□□□□ 0.35
AP4E1-202ENST00000558439 ATP2C1P98194 919 aaPredicted RBP17.21■□□□□ 0.35
AP4E1-202ENST00000558439 SETQ01105 290 aaPredicted RBP17.21■□□□□ 0.35
AP4E1-202ENST00000558439 P2RX5Q93086 422 aa17.21■□□□□ 0.35
AP4E1-202ENST00000558439 USP40Q9NVE5 1235 aa17.21■□□□□ 0.35
AP4E1-202ENST00000558439 PPP1R1BQ9UD71 204 aaPredicted RBP17.21■□□□□ 0.35
AP4E1-202ENST00000558439 SAMM50Q9Y512 469 aa17.21■□□□□ 0.35
AP4E1-202ENST00000558439 FAM208AQ9UK61 1670 aaKnown RBP17.21■□□□□ 0.35
AP4E1-202ENST00000558439 SHTN1A0MZ66 631 aa17.21■□□□□ 0.35
AP4E1-202ENST00000558439 CHMP2AO43633 222 aa17.21■□□□□ 0.35
AP4E1-202ENST00000558439 TUBB2AQ13885 445 aa17.21■□□□□ 0.35
AP4E1-202ENST00000558439 INTS5Q6P9B9 1019 aaKnown RBP17.21■□□□□ 0.35
AP4E1-202ENST00000558439 REXO1L1PQ8IX06 675 aa17.21■□□□□ 0.35
AP4E1-202ENST00000558439 FBXL16Q8N461 479 aa17.21■□□□□ 0.35
AP4E1-202ENST00000558439 NKX2-3Q8TAU0 364 aa17.21■□□□□ 0.35
AP4E1-202ENST00000558439 CHP1Q99653 195 aa17.21■□□□□ 0.35
AP4E1-202ENST00000558439 TUBB2BQ9BVA1 445 aa17.21■□□□□ 0.35
AP4E1-202ENST00000558439 GOPCQ9HD26 462 aa17.21■□□□□ 0.35
AP4E1-202ENST00000558439 ABHD10Q9NUJ1 306 aa17.21■□□□□ 0.35
AP4E1-202ENST00000558439 HSF2BPO75031 334 aa17.21■□□□□ 0.34
AP4E1-202ENST00000558439 CD44P16070 742 aaKnown RBP17.21■□□□□ 0.34
AP4E1-202ENST00000558439 TROAPQ12815 778 aa17.21■□□□□ 0.34
AP4E1-202ENST00000558439 NR1I3Q14994 352 aa17.21■□□□□ 0.34
AP4E1-202ENST00000558439 SND1Q7KZF4 910 aaKnown RBP eCLIP17.21■□□□□ 0.34
AP4E1-202ENST00000558439 DGKHQ86XP1 1220 aa17.21■□□□□ 0.34
AP4E1-202ENST00000558439 HPS3Q969F9 1004 aa17.21■□□□□ 0.34
AP4E1-202ENST00000558439 UTP18Q9Y5J1 556 aaKnown RBP eCLIP17.21■□□□□ 0.34
AP4E1-202ENST00000558439 FMN2Q9NZ56 1722 aa17.2■□□□□ 0.34
AP4E1-202ENST00000558439 CXCR5P32302 372 aa17.2■□□□□ 0.34
AP4E1-202ENST00000558439 VGLL2Q8N8G2 317 aa17.2■□□□□ 0.34
AP4E1-202ENST00000558439 PCDHA12Q9UN75 941 aa17.2■□□□□ 0.34
AP4E1-202ENST00000558439 TTC26A0AVF1 554 aa17.2■□□□□ 0.34
AP4E1-202ENST00000558439 PKD2L1Q9P0L9 805 aa17.2■□□□□ 0.34
AP4E1-202ENST00000558439 A0A1B0GTH6 734 aa17.2■□□□□ 0.34
AP4E1-202ENST00000558439 ZEB2O60315 1214 aa17.2■□□□□ 0.34
AP4E1-202ENST00000558439 CDK8P49336 464 aa17.2■□□□□ 0.34
AP4E1-202ENST00000558439 CC2D1AQ6P1N0 951 aaPredicted RBP17.2■□□□□ 0.34
AP4E1-202ENST00000558439 ABCB6Q9NP58 842 aa17.2■□□□□ 0.34
AP4E1-202ENST00000558439 ADD3Q9UEY8 706 aaKnown RBP17.19■□□□□ 0.34
AP4E1-202ENST00000558439 PARP3Q9Y6F1 533 aa17.19■□□□□ 0.34
AP4E1-202ENST00000558439 ERLIN2O94905 339 aa17.19■□□□□ 0.34
AP4E1-202ENST00000558439 TUBBP07437 444 aa17.19■□□□□ 0.34
AP4E1-202ENST00000558439 ZSCAN26Q16670 478 aa17.19■□□□□ 0.34
AP4E1-202ENST00000558439 TXNRD1Q16881 649 aa17.19■□□□□ 0.34
AP4E1-202ENST00000558439 ARL6IP4Q66PJ3 421 aaKnown RBP17.19■□□□□ 0.34
AP4E1-202ENST00000558439 CCDC84Q86UT8 332 aaPredicted RBP17.19■□□□□ 0.34
AP4E1-202ENST00000558439 MB21D1Q8N884 522 aa17.19■□□□□ 0.34
AP4E1-202ENST00000558439 MTA3Q9BTC8 594 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms