RNA–Protein interactions for RNA: ENST00000557454.1

NEDD1-211, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 4

Gene NEDD1, Length 564 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-211ENST00000557454 KMT2EQ8IZD2 1858 aa11.6□□□□□ -0.55
NEDD1-211ENST00000557454 VAMP4O75379 141 aa11.6□□□□□ -0.55
NEDD1-211ENST00000557454 SLC25A27O95847 323 aa11.6□□□□□ -0.55
NEDD1-211ENST00000557454 TMEM132BQ14DG7 1078 aa11.6□□□□□ -0.55
NEDD1-211ENST00000557454 TMCO2Q7Z6W1 182 aaPredicted RBP11.6□□□□□ -0.55
NEDD1-211ENST00000557454 NOL10Q9BSC4 688 aaKnown RBP11.6□□□□□ -0.55
NEDD1-211ENST00000557454 FLOT1O75955 427 aa11.59□□□□□ -0.55
NEDD1-211ENST00000557454 CYP2C9P11712 490 aa11.59□□□□□ -0.55
NEDD1-211ENST00000557454 ACVR2BQ13705 512 aa11.59□□□□□ -0.55
NEDD1-211ENST00000557454 ABCB5Q2M3G0 1257 aa11.59□□□□□ -0.55
NEDD1-211ENST00000557454 CCDC144BQ3MJ40 725 aa11.59□□□□□ -0.55
NEDD1-211ENST00000557454 TATDN1Q6P1N9 297 aa11.59□□□□□ -0.55
NEDD1-211ENST00000557454 ATF7IPQ6VMQ6 1270 aa11.59□□□□□ -0.55
NEDD1-211ENST00000557454 CCER1Q8TC90 406 aaPredicted RBP11.59□□□□□ -0.55
NEDD1-211ENST00000557454 TGS1Q96RS0 853 aaKnown RBP11.59□□□□□ -0.55
NEDD1-211ENST00000557454 FANCIQ9NVI1 1328 aa11.59□□□□□ -0.55
NEDD1-211ENST00000557454 A0A1W2PRG0 241 aa11.58□□□□□ -0.56
NEDD1-211ENST00000557454 GUCY1A2P33402 732 aa11.58□□□□□ -0.56
NEDD1-211ENST00000557454 ERVK-21P61565 698 aa11.58□□□□□ -0.56
NEDD1-211ENST00000557454 PSMC6P62333 389 aa11.58□□□□□ -0.56
NEDD1-211ENST00000557454 CERKLQ49MI3 558 aaPredicted RBP11.58□□□□□ -0.56
NEDD1-211ENST00000557454 KIAA1755Q5JYT7 1200 aa11.58□□□□□ -0.56
NEDD1-211ENST00000557454 MSL3Q8N5Y2 521 aaKnown RBP11.58□□□□□ -0.56
NEDD1-211ENST00000557454 PABPC5Q96DU9 382 aaKnown RBP11.58□□□□□ -0.56
NEDD1-211ENST00000557454 POP1Q99575 1024 aaKnown RBP11.58□□□□□ -0.56
NEDD1-211ENST00000557454 HMG20BQ9P0W2 317 aa11.58□□□□□ -0.56
NEDD1-211ENST00000557454 WDR87Q6ZQQ6 2873 aa11.57□□□□□ -0.56
NEDD1-211ENST00000557454 LINC01553A4QN01 128 aa11.57□□□□□ -0.56
NEDD1-211ENST00000557454 KDM4AO75164 1064 aa11.57□□□□□ -0.56
NEDD1-211ENST00000557454 CABYRO75952 493 aa11.57□□□□□ -0.56
NEDD1-211ENST00000557454 CIAO1O76071 339 aa11.57□□□□□ -0.56
NEDD1-211ENST00000557454 BAG3O95817 575 aa11.57□□□□□ -0.56
NEDD1-211ENST00000557454 PLCG2P16885 1265 aa11.57□□□□□ -0.56
NEDD1-211ENST00000557454 KCNJ6P48051 423 aa11.57□□□□□ -0.56
NEDD1-211ENST00000557454 TIMM10P62072 90 aa11.57□□□□□ -0.56
NEDD1-211ENST00000557454 SEPT2Q15019 361 aa11.57□□□□□ -0.56
NEDD1-211ENST00000557454 CLUL1Q15846 466 aa11.57□□□□□ -0.56
NEDD1-211ENST00000557454 CCDC27Q2M243 656 aa11.57□□□□□ -0.56
NEDD1-211ENST00000557454 MAMDC4Q6UXC1 1216 aa11.57□□□□□ -0.56
NEDD1-211ENST00000557454 DGLUCYQ7Z3D6 616 aa11.57□□□□□ -0.56
NEDD1-211ENST00000557454 RIOX2Q8IUF8 465 aa11.57□□□□□ -0.56
NEDD1-211ENST00000557454 ZBED2Q9BTP6 218 aa11.57□□□□□ -0.56
NEDD1-211ENST00000557454 FTOQ9C0B1 505 aaKnown RBP eCLIP11.57□□□□□ -0.56
NEDD1-211ENST00000557454 ALDH8A1Q9H2A2 487 aaPredicted RBP11.57□□□□□ -0.56
NEDD1-211ENST00000557454 CABP5Q9NP86 173 aa11.57□□□□□ -0.56
NEDD1-211ENST00000557454 TRMT13Q9NUP7 481 aaKnown RBP11.57□□□□□ -0.56
NEDD1-211ENST00000557454 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.57□□□□□ -0.56
NEDD1-211ENST00000557454 CACNA1FO60840 1977 aa11.57□□□□□ -0.56
NEDD1-211ENST00000557454 ASTN1O14525 1302 aa11.57□□□□□ -0.56
NEDD1-211ENST00000557454 AVPR2P30518 371 aa11.56□□□□□ -0.56
NEDD1-211ENST00000557454 NBL1P41271 181 aa11.56□□□□□ -0.56
NEDD1-211ENST00000557454 NKX3-2P78367 333 aa11.56□□□□□ -0.56
NEDD1-211ENST00000557454 ZXDAP98168 799 aa11.56□□□□□ -0.56
NEDD1-211ENST00000557454 SCN5AQ14524 2016 aa11.56□□□□□ -0.56
NEDD1-211ENST00000557454 SMAD2Q15796 467 aaKnown RBP11.56□□□□□ -0.56
NEDD1-211ENST00000557454 TCEAL5Q5H9L2 206 aa11.56□□□□□ -0.56
NEDD1-211ENST00000557454 ADGRA1Q86SQ6 560 aa11.56□□□□□ -0.56
NEDD1-211ENST00000557454 ADSSL1Q8N142 457 aa11.56□□□□□ -0.56
NEDD1-211ENST00000557454 SPATA5Q8NB90 893 aa11.56□□□□□ -0.56
NEDD1-211ENST00000557454 RMDN1Q96DB5 314 aa11.56□□□□□ -0.56
NEDD1-211ENST00000557454 MRPL38Q96DV4 380 aaKnown RBP11.56□□□□□ -0.56
NEDD1-211ENST00000557454 CLDND1Q9NY35 253 aa11.56□□□□□ -0.56
NEDD1-211ENST00000557454 EP300Q09472 2414 aaPredicted RBP11.56□□□□□ -0.56
NEDD1-211ENST00000557454 ZNFX1Q9P2E3 1918 aaKnown RBP11.55□□□□□ -0.56
NEDD1-211ENST00000557454 C11orf97A0A1B0GVM6 126 aaPredicted RBP11.55□□□□□ -0.56
NEDD1-211ENST00000557454 BAIAP3O94812 1187 aa11.55□□□□□ -0.56
NEDD1-211ENST00000557454 PTGS1P23219 599 aa11.55□□□□□ -0.56
NEDD1-211ENST00000557454 RFC2P35250 354 aa11.55□□□□□ -0.56
NEDD1-211ENST00000557454 WDR5P61964 334 aaKnown RBP11.55□□□□□ -0.56
NEDD1-211ENST00000557454 DEFB103AP81534 67 aa11.55□□□□□ -0.56
NEDD1-211ENST00000557454 FSCN1Q16658 493 aaKnown RBP11.55□□□□□ -0.56
NEDD1-211ENST00000557454 TIGD5Q53EQ6 642 aa11.55□□□□□ -0.56
NEDD1-211ENST00000557454 SPICE1Q8N0Z3 855 aa11.55□□□□□ -0.56
NEDD1-211ENST00000557454 FBXO22Q8NEZ5 403 aa11.55□□□□□ -0.56
NEDD1-211ENST00000557454 SPOCK2Q92563 424 aa11.55□□□□□ -0.56
NEDD1-211ENST00000557454 XAGE2Q96GT9 111 aa11.55□□□□□ -0.56
NEDD1-211ENST00000557454 ABHD16BQ9H3Z7 469 aa11.55□□□□□ -0.56
NEDD1-211ENST00000557454 LRP2BPQ9P2M1 347 aa11.55□□□□□ -0.56
NEDD1-211ENST00000557454 SERPINB13Q9UIV8 391 aa11.55□□□□□ -0.56
NEDD1-211ENST00000557454 SHMT1P34896 483 aa11.54□□□□□ -0.56
NEDD1-211ENST00000557454 STAT3P40763 770 aa11.54□□□□□ -0.56
NEDD1-211ENST00000557454 IL15P40933 162 aaPredicted RBP11.54□□□□□ -0.56
NEDD1-211ENST00000557454 PPP4CP60510 307 aa11.54□□□□□ -0.56
NEDD1-211ENST00000557454 EXOSC9Q06265 439 aaKnown RBP11.54□□□□□ -0.56
NEDD1-211ENST00000557454 COL9A2Q14055 689 aaPredicted RBP11.54□□□□□ -0.56
NEDD1-211ENST00000557454 MVPQ14764 893 aaKnown RBP11.54□□□□□ -0.56
NEDD1-211ENST00000557454 COL19A1Q14993 1142 aa11.54□□□□□ -0.56
NEDD1-211ENST00000557454 NAA16Q6N069 864 aaPredicted RBP11.54□□□□□ -0.56
NEDD1-211ENST00000557454 NOL8Q76FK4 1167 aaKnown RBP11.54□□□□□ -0.56
NEDD1-211ENST00000557454 TLK2Q86UE8 772 aa11.54□□□□□ -0.56
NEDD1-211ENST00000557454 BANK1Q8NDB2 785 aa11.54□□□□□ -0.56
NEDD1-211ENST00000557454 SPDYE1Q8NFV5 336 aaPredicted RBP11.54□□□□□ -0.56
NEDD1-211ENST00000557454 C17orf80Q9BSJ5 609 aa11.54□□□□□ -0.56
NEDD1-211ENST00000557454 SEZ6LQ9BYH1 1024 aa11.54□□□□□ -0.56
NEDD1-211ENST00000557454 PA2G4Q9UQ80 394 aaKnown RBP11.54□□□□□ -0.56
NEDD1-211ENST00000557454 ZNF292O60281 2723 aa11.54□□□□□ -0.56
NEDD1-211ENST00000557454 TNKSO95271 1327 aa11.54□□□□□ -0.56
NEDD1-211ENST00000557454 MAP1BP46821 2468 aaKnown RBP11.53□□□□□ -0.56
NEDD1-211ENST00000557454 SPTBN2O15020 2390 aa11.53□□□□□ -0.56
NEDD1-211ENST00000557454 DNAJC25-GNG10A0A024R161 153 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms