RNA–Protein interactions for RNA: ENST00000556399.5

ARHGEF40-207, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 1 (best)

Gene ARHGEF40, Length 4,902 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-207ENST00000556399 UIMC1Q96RL1 719 aa16.64■□□□□ 0.25
ARHGEF40-207ENST00000556399 NAP1L4Q99733 375 aaKnown RBP16.64■□□□□ 0.25
ARHGEF40-207ENST00000556399 IRX2Q9BZI1 471 aaPredicted RBP16.64■□□□□ 0.25
ARHGEF40-207ENST00000556399 LY9Q9HBG7 655 aa16.64■□□□□ 0.25
ARHGEF40-207ENST00000556399 PRPF3O43395 683 aaKnown RBP16.64■□□□□ 0.25
ARHGEF40-207ENST00000556399 EPHB4P54760 987 aa16.64■□□□□ 0.25
ARHGEF40-207ENST00000556399 CYP27A1Q02318 531 aa16.64■□□□□ 0.25
ARHGEF40-207ENST00000556399 RASSF7Q02833 373 aa16.64■□□□□ 0.25
ARHGEF40-207ENST00000556399 PPP1R7Q15435 360 aa16.64■□□□□ 0.25
ARHGEF40-207ENST00000556399 GRIPAP1Q4V328 841 aa16.64■□□□□ 0.25
ARHGEF40-207ENST00000556399 P2RX5Q93086 422 aa16.64■□□□□ 0.25
ARHGEF40-207ENST00000556399 NHEJ1Q9H9Q4 299 aaPredicted RBP16.64■□□□□ 0.25
ARHGEF40-207ENST00000556399 ARHGEF28Q8N1W1 1705 aaKnown RBP16.63■□□□□ 0.25
ARHGEF40-207ENST00000556399 ST3GAL1Q11201 340 aa16.63■□□□□ 0.25
ARHGEF40-207ENST00000556399 CCDC174Q6PII3 467 aa16.63■□□□□ 0.25
ARHGEF40-207ENST00000556399 ATG9AQ7Z3C6 839 aa16.63■□□□□ 0.25
ARHGEF40-207ENST00000556399 OXER1Q8TDS5 423 aa16.63■□□□□ 0.25
ARHGEF40-207ENST00000556399 MTUS1Q9ULD2 1270 aa16.63■□□□□ 0.25
ARHGEF40-207ENST00000556399 ACTN4O43707 911 aaKnown RBP16.63■□□□□ 0.25
ARHGEF40-207ENST00000556399 FOXO4P98177 505 aa16.63■□□□□ 0.25
ARHGEF40-207ENST00000556399 MYOCDQ8IZQ8 938 aa16.63■□□□□ 0.25
ARHGEF40-207ENST00000556399 ANKRD65E5RJM6 399 aa16.63■□□□□ 0.25
ARHGEF40-207ENST00000556399 PPFIA4O75335 1185 aa16.63■□□□□ 0.25
ARHGEF40-207ENST00000556399 IRX5P78411 483 aaPredicted RBP16.63■□□□□ 0.25
ARHGEF40-207ENST00000556399 ASAP1Q9ULH1 1129 aa16.63■□□□□ 0.25
ARHGEF40-207ENST00000556399 CYP27B1O15528 508 aa16.63■□□□□ 0.25
ARHGEF40-207ENST00000556399 PCP11498 1178 aaKnown RBP16.63■□□□□ 0.25
ARHGEF40-207ENST00000556399 TNFAIP3P21580 790 aa16.63■□□□□ 0.25
ARHGEF40-207ENST00000556399 CXCR5P32302 372 aa16.63■□□□□ 0.25
ARHGEF40-207ENST00000556399 MAP2K2P36507 400 aa16.63■□□□□ 0.25
ARHGEF40-207ENST00000556399 SPATS2Q86XZ4 545 aaKnown RBP16.63■□□□□ 0.25
ARHGEF40-207ENST00000556399 MAPKAPK5Q8IW41 473 aa16.63■□□□□ 0.25
ARHGEF40-207ENST00000556399 RSRC1Q96IZ7 334 aaKnown RBP16.63■□□□□ 0.25
ARHGEF40-207ENST00000556399 ZKSCAN7Q9P0L1 754 aaPredicted RBP16.63■□□□□ 0.25
ARHGEF40-207ENST00000556399 A0A087WUV0 522 aaPredicted RBP16.62■□□□□ 0.25
ARHGEF40-207ENST00000556399 ZBED6P86452 979 aa16.62■□□□□ 0.25
ARHGEF40-207ENST00000556399 SEL1L2Q5TEA6 688 aa16.62■□□□□ 0.25
ARHGEF40-207ENST00000556399 MB21D1Q8N884 522 aa16.62■□□□□ 0.25
ARHGEF40-207ENST00000556399 TUBE1Q9UJT0 475 aa16.62■□□□□ 0.25
ARHGEF40-207ENST00000556399 ZBTB22O15209 634 aa16.62■□□□□ 0.25
ARHGEF40-207ENST00000556399 MAP3K9P80192 1104 aa16.62■□□□□ 0.25
ARHGEF40-207ENST00000556399 RASGRF1Q13972 1273 aa16.62■□□□□ 0.25
ARHGEF40-207ENST00000556399 NAA25Q14CX7 972 aa16.62■□□□□ 0.25
ARHGEF40-207ENST00000556399 PTPROQ16827 1216 aa16.62■□□□□ 0.25
ARHGEF40-207ENST00000556399 NEK8Q86SG6 692 aa16.62■□□□□ 0.25
ARHGEF40-207ENST00000556399 NLRP10Q86W26 655 aa16.62■□□□□ 0.25
ARHGEF40-207ENST00000556399 CCDC170Q8IYT3 715 aa16.62■□□□□ 0.25
ARHGEF40-207ENST00000556399 TGFBRAP1Q8WUH2 860 aa16.62■□□□□ 0.25
ARHGEF40-207ENST00000556399 PRDM4Q9UKN5 801 aa16.62■□□□□ 0.25
ARHGEF40-207ENST00000556399 GDAQ9Y2T3 454 aa16.62■□□□□ 0.25
ARHGEF40-207ENST00000556399 PTPRUQ92729 1446 aa16.62■□□□□ 0.25
ARHGEF40-207ENST00000556399 KIF20BQ96Q89 1820 aa16.62■□□□□ 0.25
ARHGEF40-207ENST00000556399 GOLGA8HP0CJ92 632 aa16.62■□□□□ 0.25
ARHGEF40-207ENST00000556399 POLR2FP61218 127 aaKnown RBP16.62■□□□□ 0.25
ARHGEF40-207ENST00000556399 SF3A3Q12874 501 aaKnown RBP eCLIP16.62■□□□□ 0.252e-6■■■□□ 16.2
ARHGEF40-207ENST00000556399 HAUS3Q68CZ6 603 aa16.62■□□□□ 0.25
ARHGEF40-207ENST00000556399 L2HGDHQ9H9P8 463 aa16.62■□□□□ 0.25
ARHGEF40-207ENST00000556399 PARP3Q9Y6F1 533 aa16.62■□□□□ 0.25
ARHGEF40-207ENST00000556399 ABCC12Q96J65 1359 aa16.62■□□□□ 0.25
ARHGEF40-207ENST00000556399 CALUO43852 315 aaPredicted RBP16.62■□□□□ 0.25
ARHGEF40-207ENST00000556399 CUL4BQ13620 913 aa16.62■□□□□ 0.25
ARHGEF40-207ENST00000556399 GALNT17Q6IS24 598 aa16.62■□□□□ 0.25
ARHGEF40-207ENST00000556399 A0A0G2JLW4 131 aa16.61■□□□□ 0.25
ARHGEF40-207ENST00000556399 SRGAP2O75044 1071 aa16.61■□□□□ 0.25
ARHGEF40-207ENST00000556399 APBA1Q02410 837 aa16.61■□□□□ 0.25
ARHGEF40-207ENST00000556399 SCARF1Q14162 830 aa16.61■□□□□ 0.25
ARHGEF40-207ENST00000556399 FNBP4Q8N3X1 1017 aaPredicted RBP16.61■□□□□ 0.25
ARHGEF40-207ENST00000556399 TTLL11Q8NHH1 800 aa16.61■□□□□ 0.25
ARHGEF40-207ENST00000556399 THAP9Q9H5L6 903 aa16.61■□□□□ 0.25
ARHGEF40-207ENST00000556399 MAGEF1Q9HAY2 307 aa16.61■□□□□ 0.25
ARHGEF40-207ENST00000556399 PCDHA4Q9UN74 947 aa16.61■□□□□ 0.25
ARHGEF40-207ENST00000556399 JRKLQ9Y4A0 524 aa16.61■□□□□ 0.25
ARHGEF40-207ENST00000556399 DYNLL1P63167 89 aaKnown RBP16.61■□□□□ 0.25
ARHGEF40-207ENST00000556399 PLS1Q14651 629 aa16.61■□□□□ 0.25
ARHGEF40-207ENST00000556399 SYCE1Q8N0S2 351 aa16.61■□□□□ 0.25
ARHGEF40-207ENST00000556399 MROH7-TTC4A0A0A0MT08 1334 aa16.61■□□□□ 0.25
ARHGEF40-207ENST00000556399 MOCS3O95396 460 aa16.61■□□□□ 0.25
ARHGEF40-207ENST00000556399 ST5P78524 1137 aa16.61■□□□□ 0.25
ARHGEF40-207ENST00000556399 EHHADHQ08426 723 aa16.61■□□□□ 0.25
ARHGEF40-207ENST00000556399 FMNL3Q8IVF7 1028 aa16.61■□□□□ 0.25
ARHGEF40-207ENST00000556399 WDR66Q8TBY9 1149 aa16.61■□□□□ 0.25
ARHGEF40-207ENST00000556399 KRT12Q99456 494 aa16.61■□□□□ 0.25
ARHGEF40-207ENST00000556399 CUEDC2Q9H467 287 aa16.61■□□□□ 0.25
ARHGEF40-207ENST00000556399 KLRF2D3W0D1 207 aa16.6■□□□□ 0.25
ARHGEF40-207ENST00000556399 PLEKHA8P1O95397 391 aa16.6■□□□□ 0.25
ARHGEF40-207ENST00000556399 GNA14O95837 355 aa16.6■□□□□ 0.25
ARHGEF40-207ENST00000556399 FMR1Q06787 632 aaKnown RBP eCLIP16.6■□□□□ 0.25
ARHGEF40-207ENST00000556399 FRMD4BQ9Y2L6 1034 aa16.6■□□□□ 0.25
ARHGEF40-207ENST00000556399 DIP2CQ9Y2E4 1556 aa16.6■□□□□ 0.25
ARHGEF40-207ENST00000556399 CCDC50Q8IVM0 306 aa16.6■□□□□ 0.25
ARHGEF40-207ENST00000556399 DDX12PQ92771 950 aa16.6■□□□□ 0.25
ARHGEF40-207ENST00000556399 SEC31BQ9NQW1 1179 aa16.6■□□□□ 0.25
ARHGEF40-207ENST00000556399 ATP6V0A2Q9Y487 856 aa16.6■□□□□ 0.25
ARHGEF40-207ENST00000556399 A0A1B0GUA9 196 aa16.6■□□□□ 0.25
ARHGEF40-207ENST00000556399 EPB41L5Q9HCM4 733 aa16.6■□□□□ 0.25
ARHGEF40-207ENST00000556399 KRIT1O00522 736 aa16.6■□□□□ 0.25
ARHGEF40-207ENST00000556399 HEXIM1O94992 359 aaKnown RBP16.6■□□□□ 0.25
ARHGEF40-207ENST00000556399 PNMA8AQ86V59 439 aaPredicted RBP16.6■□□□□ 0.25
ARHGEF40-207ENST00000556399 FAM184BQ9ULE4 1060 aa16.6■□□□□ 0.25
ARHGEF40-207ENST00000556399 CYP2D7A0A087X1C5 515 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms