RNA–Protein interactions for RNA: ENST00000555353.5

FOXN3-209, Transcript of forkhead box N3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene FOXN3, Length 1,595 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-209ENST00000555353 MMP19Q99542 508 aa23.92■■□□□ 1.42
FOXN3-209ENST00000555353 LRRC2Q9BYS8 371 aa23.92■■□□□ 1.42
FOXN3-209ENST00000555353 UBA5Q9GZZ9 404 aa23.92■■□□□ 1.42
FOXN3-209ENST00000555353 RANBP17Q9H2T7 1088 aaKnown RBP23.92■■□□□ 1.42
FOXN3-209ENST00000555353 GPHNQ9NQX3 736 aaPredicted RBP23.92■■□□□ 1.42
FOXN3-209ENST00000555353 CCDC69A6NI79 296 aa23.91■■□□□ 1.42
FOXN3-209ENST00000555353 LIFRP42702 1097 aa23.91■■□□□ 1.42
FOXN3-209ENST00000555353 UBXN2AP68543 259 aa23.91■■□□□ 1.42
FOXN3-209ENST00000555353 KCTD2Q14681 263 aa23.91■■□□□ 1.42
FOXN3-209ENST00000555353 DPP9Q86TI2 863 aa23.91■■□□□ 1.42
FOXN3-209ENST00000555353 AGBL1Q96MI9 1066 aa23.91■■□□□ 1.42
FOXN3-209ENST00000555353 MYH6P13533 1939 aa23.91■■□□□ 1.42
FOXN3-209ENST00000555353 ZNF536O15090 1300 aa23.91■■□□□ 1.42
FOXN3-209ENST00000555353 DHX16O60231 1041 aaKnown RBP23.91■■□□□ 1.42
FOXN3-209ENST00000555353 PSMA5P28066 241 aa23.91■■□□□ 1.42
FOXN3-209ENST00000555353 TRMT44Q8IYL2 757 aaKnown RBP23.91■■□□□ 1.42
FOXN3-209ENST00000555353 ZNF654Q8IZM8 581 aa23.91■■□□□ 1.42
FOXN3-209ENST00000555353 NUP133Q8WUM0 1156 aa23.91■■□□□ 1.42
FOXN3-209ENST00000555353 CPVLQ9H3G5 476 aa23.91■■□□□ 1.42
FOXN3-209ENST00000555353 HOMER2Q9NSB8 354 aa23.91■■□□□ 1.42
FOXN3-209ENST00000555353 SLC5A4Q9NY91 659 aa23.91■■□□□ 1.42
FOXN3-209ENST00000555353 FBXO40Q9UH90 709 aa23.91■■□□□ 1.42
FOXN3-209ENST00000555353 CCPG1Q9ULG6 757 aa23.91■■□□□ 1.42
FOXN3-209ENST00000555353 MYCP01106 439 aaPredicted RBP23.9■■□□□ 1.42
FOXN3-209ENST00000555353 ICAM1P05362 532 aa23.9■■□□□ 1.42
FOXN3-209ENST00000555353 TROAPQ12815 778 aa23.9■■□□□ 1.42
FOXN3-209ENST00000555353 GRM4Q14833 912 aa23.9■■□□□ 1.42
FOXN3-209ENST00000555353 CHST13Q8NET6 341 aa23.9■■□□□ 1.42
FOXN3-209ENST00000555353 KLRF2D3W0D1 207 aa23.89■■□□□ 1.41
FOXN3-209ENST00000555353 DDAH1O94760 285 aa23.89■■□□□ 1.41
FOXN3-209ENST00000555353 HMGCRP04035 888 aa23.89■■□□□ 1.41
FOXN3-209ENST00000555353 INHAP05111 366 aa23.89■■□□□ 1.41
FOXN3-209ENST00000555353 ALAS1P13196 640 aa23.89■■□□□ 1.41
FOXN3-209ENST00000555353 FGD1P98174 961 aa23.89■■□□□ 1.41
FOXN3-209ENST00000555353 EXOSC10Q01780 885 aaKnown RBP23.89■■□□□ 1.41
FOXN3-209ENST00000555353 TKFCQ3LXA3 575 aa23.89■■□□□ 1.41
FOXN3-209ENST00000555353 BLOC1S2Q6QNY1 142 aa23.89■■□□□ 1.41
FOXN3-209ENST00000555353 STAG2Q8N3U4 1231 aa23.89■■□□□ 1.41
FOXN3-209ENST00000555353 TCEANC2Q96MN5 208 aa23.89■■□□□ 1.41
FOXN3-209ENST00000555353 MAD2L2Q9UI95 211 aa23.89■■□□□ 1.41
FOXN3-209ENST00000555353 PNMA2Q9UL42 364 aa23.89■■□□□ 1.41
FOXN3-209ENST00000555353 KIAA0100Q14667 2235 aaKnown RBP23.89■■□□□ 1.41
FOXN3-209ENST00000555353 SMCHD1A6NHR9 2005 aa23.88■■□□□ 1.41
FOXN3-209ENST00000555353 PALM3A6NDB9 673 aaPredicted RBP23.88■■□□□ 1.41
FOXN3-209ENST00000555353 HOXC6P09630 235 aa23.88■■□□□ 1.41
FOXN3-209ENST00000555353 ADGRF4Q8IZF3 695 aa23.88■■□□□ 1.41
FOXN3-209ENST00000555353 TRIB2Q92519 343 aa23.88■■□□□ 1.41
FOXN3-209ENST00000555353 IL17RAQ96F46 866 aa23.88■■□□□ 1.41
FOXN3-209ENST00000555353 ACAD9Q9H845 621 aa23.88■■□□□ 1.41
FOXN3-209ENST00000555353 RNF146Q9NTX7 359 aa23.88■■□□□ 1.41
FOXN3-209ENST00000555353 SLC12A7Q9Y666 1083 aa23.88■■□□□ 1.41
FOXN3-209ENST00000555353 PLXNA1Q9UIW2 1896 aa23.87■■□□□ 1.41
FOXN3-209ENST00000555353 CTCFLQ8NI51 663 aaPredicted RBP23.87■■□□□ 1.41
FOXN3-209ENST00000555353 DDX11Q96FC9 970 aa23.87■■□□□ 1.41
FOXN3-209ENST00000555353 TRERF1Q96PN7 1200 aa23.87■■□□□ 1.41
FOXN3-209ENST00000555353 MYL10Q9BUA6 226 aa23.87■■□□□ 1.41
FOXN3-209ENST00000555353 VAT1LQ9HCJ6 419 aa23.87■■□□□ 1.41
FOXN3-209ENST00000555353 BAZ2BQ9UIF8 2168 aaKnown RBP23.87■■□□□ 1.41
FOXN3-209ENST00000555353 CALM1P0DP23 149 aa23.86■■□□□ 1.41
FOXN3-209ENST00000555353 CALM2P0DP24 149 aa23.86■■□□□ 1.41
FOXN3-209ENST00000555353 CALM3P0DP25 149 aa23.86■■□□□ 1.41
FOXN3-209ENST00000555353 CASTP20810 708 aaKnown RBP23.86■■□□□ 1.41
FOXN3-209ENST00000555353 KIF5BP33176 963 aa23.86■■□□□ 1.41
FOXN3-209ENST00000555353 CCL14Q16627 93 aa23.86■■□□□ 1.41
FOXN3-209ENST00000555353 IFFO2Q5TF58 517 aa23.86■■□□□ 1.41
FOXN3-209ENST00000555353 SYNE3Q6ZMZ3 975 aa23.86■■□□□ 1.41
FOXN3-209ENST00000555353 SGMS1Q86VZ5 419 aa23.86■■□□□ 1.41
FOXN3-209ENST00000555353 ANKRD35Q8N283 1001 aa23.86■■□□□ 1.41
FOXN3-209ENST00000555353 IL27Q8NEV9 243 aa23.86■■□□□ 1.41
FOXN3-209ENST00000555353 MAP3K14Q99558 947 aa23.86■■□□□ 1.41
FOXN3-209ENST00000555353 TMEM106CQ9BVX2 250 aa23.86■■□□□ 1.41
FOXN3-209ENST00000555353 TM6SF1Q9BZW5 370 aa23.86■■□□□ 1.41
FOXN3-209ENST00000555353 COBLO75128 1261 aa23.86■■□□□ 1.41
FOXN3-209ENST00000555353 CPA1P15085 419 aa23.86■■□□□ 1.41
FOXN3-209ENST00000555353 RABEP1Q15276 862 aa23.86■■□□□ 1.41
FOXN3-209ENST00000555353 CDC37Q16543 378 aaPredicted RBP23.86■■□□□ 1.41
FOXN3-209ENST00000555353 NPLOC4Q8TAT6 608 aa23.86■■□□□ 1.41
FOXN3-209ENST00000555353 PGK2P07205 417 aa23.85■■□□□ 1.41
FOXN3-209ENST00000555353 MTFR1Q15390 333 aa23.85■■□□□ 1.41
FOXN3-209ENST00000555353 DHX30Q7L2E3 1194 aaKnown RBP eCLIP23.85■■□□□ 1.41
FOXN3-209ENST00000555353 JMJD4Q9H9V9 463 aa23.85■■□□□ 1.41
FOXN3-209ENST00000555353 TSHZ2Q9NRE2 1034 aa23.85■■□□□ 1.41
FOXN3-209ENST00000555353 RPS6KB1P23443 525 aa23.84■■□□□ 1.41
FOXN3-209ENST00000555353 SOX10P56693 466 aa23.84■■□□□ 1.41
FOXN3-209ENST00000555353 MFSD14CQ5VZR4 134 aa23.84■■□□□ 1.41
FOXN3-209ENST00000555353 CCL5P13501 91 aa23.83■■□□□ 1.41
FOXN3-209ENST00000555353 KIF2CQ99661 725 aa23.83■■□□□ 1.41
FOXN3-209ENST00000555353 RNF208Q9H0X6 261 aa23.83■■□□□ 1.41
FOXN3-209ENST00000555353 FLRT1Q9NZU1 646 aa23.83■■□□□ 1.41
FOXN3-209ENST00000555353 PRKAR2AP13861 404 aaKnown RBP23.82■■□□□ 1.4
FOXN3-209ENST00000555353 TAL1P17542 331 aaPredicted RBP23.82■■□□□ 1.4
FOXN3-209ENST00000555353 RXRAP19793 462 aa23.82■■□□□ 1.4
FOXN3-209ENST00000555353 GNAQP50148 359 aa23.82■■□□□ 1.4
FOXN3-209ENST00000555353 TRIM32Q13049 653 aa23.82■■□□□ 1.4
FOXN3-209ENST00000555353 QRICH1Q2TAL8 776 aa23.82■■□□□ 1.4
FOXN3-209ENST00000555353 USH1GQ495M9 461 aa23.82■■□□□ 1.4
FOXN3-209ENST00000555353 MUM1L1Q5H9M0 696 aa23.82■■□□□ 1.4
FOXN3-209ENST00000555353 Q6ZUG5 572 aa23.82■■□□□ 1.4
FOXN3-209ENST00000555353 MICU3Q86XE3 530 aa23.82■■□□□ 1.4
FOXN3-209ENST00000555353 DIS3Q9Y2L1 958 aaKnown RBP23.82■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms