RNA–Protein interactions for RNA: ENST00000553807.1

XRCC3-205, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 2

Gene XRCC3, Length 568 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-205ENST00000553807 MAML3Q96JK9 1138 aa23.93■■□□□ 1.42
XRCC3-205ENST00000553807 RNF146Q9NTX7 359 aa23.93■■□□□ 1.42
XRCC3-205ENST00000553807 FARP2O94887 1054 aaPredicted RBP23.92■■□□□ 1.42
XRCC3-205ENST00000553807 ALAS1P13196 640 aa23.92■■□□□ 1.42
XRCC3-205ENST00000553807 TAL1P17542 331 aaPredicted RBP23.92■■□□□ 1.42
XRCC3-205ENST00000553807 CHST13Q8NET6 341 aa23.92■■□□□ 1.42
XRCC3-205ENST00000553807 DDX11Q96FC9 970 aa23.92■■□□□ 1.42
XRCC3-205ENST00000553807 RANBP17Q9H2T7 1088 aaKnown RBP23.92■■□□□ 1.42
XRCC3-205ENST00000553807 FBXO40Q9UH90 709 aa23.92■■□□□ 1.42
XRCC3-205ENST00000553807 CCPG1Q9ULG6 757 aa23.92■■□□□ 1.42
XRCC3-205ENST00000553807 ZNFX1Q9P2E3 1918 aaKnown RBP23.91■■□□□ 1.42
XRCC3-205ENST00000553807 SEC23AQ15436 765 aa23.91■■□□□ 1.42
XRCC3-205ENST00000553807 GPATCH4Q5T3I0 446 aaKnown RBP23.91■■□□□ 1.42
XRCC3-205ENST00000553807 CHST3Q7LGC8 479 aa23.91■■□□□ 1.42
XRCC3-205ENST00000553807 ANKRD35Q8N283 1001 aa23.91■■□□□ 1.42
XRCC3-205ENST00000553807 CRISPLD2Q9H0B8 497 aa23.91■■□□□ 1.42
XRCC3-205ENST00000553807 ACAD9Q9H845 621 aa23.91■■□□□ 1.42
XRCC3-205ENST00000553807 PLXNA1Q9UIW2 1896 aa23.91■■□□□ 1.42
XRCC3-205ENST00000553807 IFIT3O14879 490 aaKnown RBP23.9■■□□□ 1.42
XRCC3-205ENST00000553807 SLC27A2O14975 620 aa23.9■■□□□ 1.42
XRCC3-205ENST00000553807 CNGA1P29973 690 aa23.9■■□□□ 1.42
XRCC3-205ENST00000553807 ZNF792Q3KQV3 632 aa23.9■■□□□ 1.42
XRCC3-205ENST00000553807 CREB3L3Q68CJ9 461 aa23.9■■□□□ 1.42
XRCC3-205ENST00000553807 CPVLQ9H3G5 476 aa23.9■■□□□ 1.42
XRCC3-205ENST00000553807 ERICH2A1L162 156 aa23.89■■□□□ 1.41
XRCC3-205ENST00000553807 ICAM1P05362 532 aa23.89■■□□□ 1.41
XRCC3-205ENST00000553807 CYBAP13498 195 aa23.89■■□□□ 1.41
XRCC3-205ENST00000553807 SART3Q15020 963 aaKnown RBP23.89■■□□□ 1.41
XRCC3-205ENST00000553807 TKFCQ3LXA3 575 aa23.89■■□□□ 1.41
XRCC3-205ENST00000553807 MB21D2Q8IYB1 491 aaPredicted RBP23.89■■□□□ 1.41
XRCC3-205ENST00000553807 TRPV1Q8NER1 839 aa23.89■■□□□ 1.41
XRCC3-205ENST00000553807 TRERF1Q96PN7 1200 aa23.89■■□□□ 1.41
XRCC3-205ENST00000553807 IGHA2P01877 340 aa23.88■■□□□ 1.41
XRCC3-205ENST00000553807 PARP1P09874 1014 aaKnown RBP23.88■■□□□ 1.41
XRCC3-205ENST00000553807 ASPRV1Q53RT3 343 aa23.88■■□□□ 1.41
XRCC3-205ENST00000553807 UBA5Q9GZZ9 404 aa23.88■■□□□ 1.41
XRCC3-205ENST00000553807 DIS3Q9Y2L1 958 aaKnown RBP23.88■■□□□ 1.41
XRCC3-205ENST00000553807 PDE4DIPQ5VU43 2346 aa23.88■■□□□ 1.41
XRCC3-205ENST00000553807 ANTXR2P58335 489 aa23.87■■□□□ 1.41
XRCC3-205ENST00000553807 WTAPQ15007 396 aa23.87■■□□□ 1.41
XRCC3-205ENST00000553807 NECTIN1Q15223 517 aa23.87■■□□□ 1.41
XRCC3-205ENST00000553807 TMEM67Q5HYA8 995 aa23.87■■□□□ 1.41
XRCC3-205ENST00000553807 PRAMEF19Q5SWL8 479 aa23.87■■□□□ 1.41
XRCC3-205ENST00000553807 DHX30Q7L2E3 1194 aaKnown RBP eCLIP23.87■■□□□ 1.41
XRCC3-205ENST00000553807 SENP2Q9HC62 589 aa23.87■■□□□ 1.41
XRCC3-205ENST00000553807 DNAJC25-GNG10A0A024R161 153 aa23.86■■□□□ 1.41
XRCC3-205ENST00000553807 DHX16O60231 1041 aaKnown RBP23.86■■□□□ 1.41
XRCC3-205ENST00000553807 MUM1L1Q5H9M0 696 aa23.86■■□□□ 1.41
XRCC3-205ENST00000553807 UBE2Q1Q7Z7E8 422 aa23.86■■□□□ 1.41
XRCC3-205ENST00000553807 DIS3LQ8TF46 1054 aaKnown RBP23.86■■□□□ 1.41
XRCC3-205ENST00000553807 TINF2Q9BSI4 451 aa23.86■■□□□ 1.41
XRCC3-205ENST00000553807 A1CFQ9NQ94 594 aaKnown RBP23.86■■□□□ 1.41
XRCC3-205ENST00000553807 DDX20Q9UHI6 824 aaKnown RBP23.86■■□□□ 1.41
XRCC3-205ENST00000553807 OGDHLQ9ULD0 1010 aa23.86■■□□□ 1.41
XRCC3-205ENST00000553807 FRMPD3Q5JV73 1810 aa23.86■■□□□ 1.41
XRCC3-205ENST00000553807 RNF20Q5VTR2 975 aa23.85■■□□□ 1.41
XRCC3-205ENST00000553807 LHX8Q68G74 356 aa23.85■■□□□ 1.41
XRCC3-205ENST00000553807 POTEB2H3BUK9 544 aa23.84■■□□□ 1.41
XRCC3-205ENST00000553807 PRC1O43663 620 aa23.84■■□□□ 1.41
XRCC3-205ENST00000553807 CAPN2P17655 700 aa23.84■■□□□ 1.41
XRCC3-205ENST00000553807 CDC37Q16543 378 aaPredicted RBP23.84■■□□□ 1.41
XRCC3-205ENST00000553807 NSMFQ6X4W1 530 aa23.84■■□□□ 1.41
XRCC3-205ENST00000553807 ANKLE1Q8NAG6 615 aa23.84■■□□□ 1.41
XRCC3-205ENST00000553807 PFASO15067 1338 aa23.84■■□□□ 1.41
XRCC3-205ENST00000553807 MSCO60682 206 aa23.83■■□□□ 1.41
XRCC3-205ENST00000553807 CNTN2Q02246 1040 aa23.83■■□□□ 1.41
XRCC3-205ENST00000553807 ANO1Q5XXA6 986 aa23.83■■□□□ 1.41
XRCC3-205ENST00000553807 ADGRF4Q8IZF3 695 aa23.83■■□□□ 1.41
XRCC3-205ENST00000553807 STAG2Q8N3U4 1231 aa23.83■■□□□ 1.41
XRCC3-205ENST00000553807 PAWRQ96IZ0 340 aaKnown RBP23.83■■□□□ 1.41
XRCC3-205ENST00000553807 FGD4Q96M96 766 aa23.83■■□□□ 1.41
XRCC3-205ENST00000553807 CNPY2Q9Y2B0 182 aa23.83■■□□□ 1.41
XRCC3-205ENST00000553807 NFIBO00712 420 aa23.82■■□□□ 1.4
XRCC3-205ENST00000553807 SEPT4O43236 478 aa23.82■■□□□ 1.4
XRCC3-205ENST00000553807 MCM5P33992 734 aa23.82■■□□□ 1.4
XRCC3-205ENST00000553807 COL9A3Q14050 684 aaPredicted RBP23.82■■□□□ 1.4
XRCC3-205ENST00000553807 USH1GQ495M9 461 aa23.82■■□□□ 1.4
XRCC3-205ENST00000553807 VAT1LQ9HCJ6 419 aa23.82■■□□□ 1.4
XRCC3-205ENST00000553807 GPHNQ9NQX3 736 aaPredicted RBP23.82■■□□□ 1.4
XRCC3-205ENST00000553807 PNMA2Q9UL42 364 aa23.82■■□□□ 1.4
XRCC3-205ENST00000553807 WDR19Q8NEZ3 1342 aa23.82■■□□□ 1.4
XRCC3-205ENST00000553807 SYNGAP1Q96PV0 1343 aa23.82■■□□□ 1.4
XRCC3-205ENST00000553807 GRM4Q14833 912 aa23.81■■□□□ 1.4
XRCC3-205ENST00000553807 NECAB2Q7Z6G3 386 aa23.81■■□□□ 1.4
XRCC3-205ENST00000553807 CATIPQ7Z7H3 387 aa23.81■■□□□ 1.4
XRCC3-205ENST00000553807 ZNF467Q7Z7K2 595 aaPredicted RBP23.81■■□□□ 1.4
XRCC3-205ENST00000553807 MSL3Q8N5Y2 521 aaKnown RBP23.81■■□□□ 1.4
XRCC3-205ENST00000553807 FAM133AQ8N9E0 248 aa23.81■■□□□ 1.4
XRCC3-205ENST00000553807 IGDCC4Q8TDY8 1250 aa23.81■■□□□ 1.4
XRCC3-205ENST00000553807 LY9Q9HBG7 655 aa23.81■■□□□ 1.4
XRCC3-205ENST00000553807 CYP39A1Q9NYL5 469 aa23.81■■□□□ 1.4
XRCC3-205ENST00000553807 NRBP1Q9UHY1 535 aa23.81■■□□□ 1.4
XRCC3-205ENST00000553807 MAD2L2Q9UI95 211 aa23.81■■□□□ 1.4
XRCC3-205ENST00000553807 ZHX1Q9UKY1 873 aaPredicted RBP23.81■■□□□ 1.4
XRCC3-205ENST00000553807 SMCHD1A6NHR9 2005 aa23.81■■□□□ 1.4
XRCC3-205ENST00000553807 KLRF2D3W0D1 207 aa23.8■■□□□ 1.4
XRCC3-205ENST00000553807 MNX1P50219 401 aaPredicted RBP23.8■■□□□ 1.4
XRCC3-205ENST00000553807 NFXL1Q6ZNB6 911 aa23.8■■□□□ 1.4
XRCC3-205ENST00000553807 HTATIP2Q9BUP3 242 aa23.8■■□□□ 1.4
XRCC3-205ENST00000553807 PTPDC1A2A3K4 754 aa23.79■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms