RNA–Protein interactions for RNA: ENST00000553753.5

HNRNPC-208, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 5 BASIC

Gene HNRNPC, Length 1,790 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-208ENST00000553753 CNGA1P29973 690 aa11.97□□□□□ -0.49
HNRNPC-208ENST00000553753 SNAP25P60880 206 aa11.97□□□□□ -0.49
HNRNPC-208ENST00000553753 GPATCH4Q5T3I0 446 aaKnown RBP11.97□□□□□ -0.49
HNRNPC-208ENST00000553753 SYDE2Q5VT97 1194 aa11.97□□□□□ -0.49
HNRNPC-208ENST00000553753 CCDC174Q6PII3 467 aa11.97□□□□□ -0.49
HNRNPC-208ENST00000553753 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.97□□□□□ -0.49
HNRNPC-208ENST00000553753 ANKRD35Q8N283 1001 aa11.97□□□□□ -0.49
HNRNPC-208ENST00000553753 ANKLE1Q8NAG6 615 aa11.97□□□□□ -0.49
HNRNPC-208ENST00000553753 RBM8AQ9Y5S9 174 aaKnown RBP11.97□□□□□ -0.49
HNRNPC-208ENST00000553753 DNAJC25-GNG10A0A024R161 153 aa11.97□□□□□ -0.49
HNRNPC-208ENST00000553753 E7EWF7 191 aa11.97□□□□□ -0.49
HNRNPC-208ENST00000553753 MSCO60682 206 aa11.97□□□□□ -0.49
HNRNPC-208ENST00000553753 CENPBP07199 599 aaPredicted RBP11.97□□□□□ -0.49
HNRNPC-208ENST00000553753 CYBAP13498 195 aa11.97□□□□□ -0.49
HNRNPC-208ENST00000553753 IFIT1BQ5T764 474 aaKnown RBP11.97□□□□□ -0.49
HNRNPC-208ENST00000553753 POTEHQ6S545 545 aa11.97□□□□□ -0.49
HNRNPC-208ENST00000553753 CYB5R4Q7L1T6 521 aa11.97□□□□□ -0.49
HNRNPC-208ENST00000553753 RALYLQ86SE5 291 aaKnown RBP11.97□□□□□ -0.49
HNRNPC-208ENST00000553753 NCOA7Q8NI08 942 aa11.97□□□□□ -0.49
HNRNPC-208ENST00000553753 PAWRQ96IZ0 340 aaKnown RBP11.97□□□□□ -0.49
HNRNPC-208ENST00000553753 TINF2Q9BSI4 451 aa11.97□□□□□ -0.49
HNRNPC-208ENST00000553753 LSG1Q9H089 658 aaKnown RBP11.97□□□□□ -0.49
HNRNPC-208ENST00000553753 RANBP17Q9H2T7 1088 aaKnown RBP11.97□□□□□ -0.49
HNRNPC-208ENST00000553753 ACAD9Q9H845 621 aa11.97□□□□□ -0.49
HNRNPC-208ENST00000553753 TAF6LQ9Y6J9 622 aa11.97□□□□□ -0.49
HNRNPC-208ENST00000553753 ICAM1P05362 532 aa11.96□□□□□ -0.49
HNRNPC-208ENST00000553753 GOLGA8HP0CJ92 632 aa11.96□□□□□ -0.49
HNRNPC-208ENST00000553753 ALAS1P13196 640 aa11.96□□□□□ -0.49
HNRNPC-208ENST00000553753 TKFCQ3LXA3 575 aa11.96□□□□□ -0.49
HNRNPC-208ENST00000553753 PRAMEF19Q5SWL8 479 aa11.96□□□□□ -0.49
HNRNPC-208ENST00000553753 PRPF38BQ5VTL8 546 aaKnown RBP11.96□□□□□ -0.49
HNRNPC-208ENST00000553753 CASC1Q6TDU7 716 aa11.96□□□□□ -0.49
HNRNPC-208ENST00000553753 NECAB2Q7Z6G3 386 aa11.96□□□□□ -0.49
HNRNPC-208ENST00000553753 TRPV1Q8NER1 839 aa11.96□□□□□ -0.49
HNRNPC-208ENST00000553753 TRERF1Q96PN7 1200 aa11.96□□□□□ -0.49
HNRNPC-208ENST00000553753 HTATIP2Q9BUP3 242 aa11.96□□□□□ -0.49
HNRNPC-208ENST00000553753 ANO2Q9NQ90 1003 aa11.96□□□□□ -0.49
HNRNPC-208ENST00000553753 RNF146Q9NTX7 359 aa11.96□□□□□ -0.49
HNRNPC-208ENST00000553753 DDX20Q9UHI6 824 aaKnown RBP11.96□□□□□ -0.49
HNRNPC-208ENST00000553753 CCPG1Q9ULG6 757 aa11.96□□□□□ -0.49
HNRNPC-208ENST00000553753 CEP290O15078 2479 aa11.96□□□□□ -0.5
HNRNPC-208ENST00000553753 RANBP2P49792 3224 aaKnown RBP11.95□□□□□ -0.5
HNRNPC-208ENST00000553753 SEC23AQ15436 765 aa11.95□□□□□ -0.5
HNRNPC-208ENST00000553753 STOX1Q6ZVD7 989 aa11.95□□□□□ -0.5
HNRNPC-208ENST00000553753 MSL3Q8N5Y2 521 aaKnown RBP11.95□□□□□ -0.5
HNRNPC-208ENST00000553753 DIS3LQ8TF46 1054 aaKnown RBP11.95□□□□□ -0.5
HNRNPC-208ENST00000553753 DPF3Q92784 378 aa11.95□□□□□ -0.5
HNRNPC-208ENST00000553753 PLXNA1Q9UIW2 1896 aa11.95□□□□□ -0.5
HNRNPC-208ENST00000553753 ERICH2A1L162 156 aa11.95□□□□□ -0.5
HNRNPC-208ENST00000553753 IFIT3O14879 490 aaKnown RBP11.95□□□□□ -0.5
HNRNPC-208ENST00000553753 SEPT4O43236 478 aa11.95□□□□□ -0.5
HNRNPC-208ENST00000553753 CDC45O75419 566 aa11.95□□□□□ -0.5
HNRNPC-208ENST00000553753 MNX1P50219 401 aaPredicted RBP11.95□□□□□ -0.5
HNRNPC-208ENST00000553753 SART3Q15020 963 aaKnown RBP11.95□□□□□ -0.5
HNRNPC-208ENST00000553753 ASPRV1Q53RT3 343 aa11.95□□□□□ -0.5
HNRNPC-208ENST00000553753 MAMDC4Q6UXC1 1216 aa11.95□□□□□ -0.5
HNRNPC-208ENST00000553753 ZNF467Q7Z7K2 595 aaPredicted RBP11.95□□□□□ -0.5
HNRNPC-208ENST00000553753 UBA5Q9GZZ9 404 aa11.95□□□□□ -0.5
HNRNPC-208ENST00000553753 A1CFQ9NQ94 594 aaKnown RBP11.95□□□□□ -0.5
HNRNPC-208ENST00000553753 NRBP1Q9UHY1 535 aa11.95□□□□□ -0.5
HNRNPC-208ENST00000553753 PARP1P09874 1014 aaKnown RBP11.94□□□□□ -0.5
HNRNPC-208ENST00000553753 NECTIN1Q15223 517 aa11.94□□□□□ -0.5
HNRNPC-208ENST00000553753 MUM1L1Q5H9M0 696 aa11.94□□□□□ -0.5
HNRNPC-208ENST00000553753 ERICH6BQ5W0A0 696 aa11.94□□□□□ -0.5
HNRNPC-208ENST00000553753 CHST3Q7LGC8 479 aa11.94□□□□□ -0.5
HNRNPC-208ENST00000553753 PNMA2Q9UL42 364 aa11.94□□□□□ -0.5
HNRNPC-208ENST00000553753 CNPY2Q9Y2B0 182 aa11.94□□□□□ -0.5
HNRNPC-208ENST00000553753 PFASO15067 1338 aa11.94□□□□□ -0.5
HNRNPC-208ENST00000553753 SYNGAP1Q96PV0 1343 aa11.94□□□□□ -0.5
HNRNPC-208ENST00000553753 SMCHD1A6NHR9 2005 aa11.94□□□□□ -0.5
HNRNPC-208ENST00000553753 POTEB2H3BUK9 544 aa11.93□□□□□ -0.5
HNRNPC-208ENST00000553753 SLC27A2O14975 620 aa11.93□□□□□ -0.5
HNRNPC-208ENST00000553753 CNTN2Q02246 1040 aa11.93□□□□□ -0.5
HNRNPC-208ENST00000553753 CREB3L3Q68CJ9 461 aa11.93□□□□□ -0.5
HNRNPC-208ENST00000553753 FAM133AQ8N9E0 248 aa11.93□□□□□ -0.5
HNRNPC-208ENST00000553753 CPVLQ9H3G5 476 aa11.93□□□□□ -0.5
HNRNPC-208ENST00000553753 PPP4R2Q9NY27 417 aa11.93□□□□□ -0.5
HNRNPC-208ENST00000553753 CYP39A1Q9NYL5 469 aa11.93□□□□□ -0.5
HNRNPC-208ENST00000553753 SNAI1O95863 264 aaPredicted RBP11.92□□□□□ -0.5
HNRNPC-208ENST00000553753 TAL1P17542 331 aaPredicted RBP11.92□□□□□ -0.5
HNRNPC-208ENST00000553753 WTAPQ15007 396 aa11.92□□□□□ -0.5
HNRNPC-208ENST00000553753 ANO1Q5XXA6 986 aa11.92□□□□□ -0.5
HNRNPC-208ENST00000553753 MB21D2Q8IYB1 491 aaPredicted RBP11.92□□□□□ -0.5
HNRNPC-208ENST00000553753 ADGRF4Q8IZF3 695 aa11.92□□□□□ -0.5
HNRNPC-208ENST00000553753 FGD4Q96M96 766 aa11.92□□□□□ -0.5
HNRNPC-208ENST00000553753 C11orf49Q9H6J7 331 aa11.92□□□□□ -0.5
HNRNPC-208ENST00000553753 WDR19Q8NEZ3 1342 aa11.92□□□□□ -0.5
HNRNPC-208ENST00000553753 ZNF865P0CJ78 1059 aaPredicted RBP11.92□□□□□ -0.5
HNRNPC-208ENST00000553753 ANTXR2P58335 489 aa11.92□□□□□ -0.5
HNRNPC-208ENST00000553753 TMEM67Q5HYA8 995 aa11.92□□□□□ -0.5
HNRNPC-208ENST00000553753 RNF20Q5VTR2 975 aa11.92□□□□□ -0.5
HNRNPC-208ENST00000553753 NSMFQ6X4W1 530 aa11.92□□□□□ -0.5
HNRNPC-208ENST00000553753 STAG2Q8N3U4 1231 aa11.92□□□□□ -0.5
HNRNPC-208ENST00000553753 ARRDC4Q8NCT1 418 aa11.92□□□□□ -0.5
HNRNPC-208ENST00000553753 IGDCC4Q8TDY8 1250 aa11.92□□□□□ -0.5
HNRNPC-208ENST00000553753 KLRF2D3W0D1 207 aa11.91□□□□□ -0.5
HNRNPC-208ENST00000553753 DNM1LO00429 736 aa11.91□□□□□ -0.5
HNRNPC-208ENST00000553753 NFIBO00712 420 aa11.91□□□□□ -0.5
HNRNPC-208ENST00000553753 DHX16O60231 1041 aaKnown RBP11.91□□□□□ -0.5
HNRNPC-208ENST00000553753 EVI5O60447 810 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms