RNA–Protein interactions for RNA: ENST00000553751.1

FOXA1-203, Transcript of forkhead box A1, humanhuman

TSL 4

Gene FOXA1, Length 507 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA1-203ENST00000553751 CYP2C19P33261 490 aa23.88■■□□□ 1.41
FOXA1-203ENST00000553751 NECTIN1Q15223 517 aa23.88■■□□□ 1.41
FOXA1-203ENST00000553751 GPATCH4Q5T3I0 446 aaKnown RBP23.88■■□□□ 1.41
FOXA1-203ENST00000553751 CCDC174Q6PII3 467 aa23.88■■□□□ 1.41
FOXA1-203ENST00000553751 MB21D2Q8IYB1 491 aaPredicted RBP23.88■■□□□ 1.41
FOXA1-203ENST00000553751 CHST13Q8NET6 341 aa23.88■■□□□ 1.41
FOXA1-203ENST00000553751 MAML3Q96JK9 1138 aa23.88■■□□□ 1.41
FOXA1-203ENST00000553751 CRISPLD2Q9H0B8 497 aa23.88■■□□□ 1.41
FOXA1-203ENST00000553751 PLXNA1Q9UIW2 1896 aa23.87■■□□□ 1.41
FOXA1-203ENST00000553751 SLC27A2O14975 620 aa23.87■■□□□ 1.41
FOXA1-203ENST00000553751 GOLGA8HP0CJ92 632 aa23.87■■□□□ 1.41
FOXA1-203ENST00000553751 ZNF792Q3KQV3 632 aa23.87■■□□□ 1.41
FOXA1-203ENST00000553751 IFIT1BQ5T764 474 aaKnown RBP23.87■■□□□ 1.41
FOXA1-203ENST00000553751 CREB3L3Q68CJ9 461 aa23.87■■□□□ 1.41
FOXA1-203ENST00000553751 HOMER2Q9NSB8 354 aa23.87■■□□□ 1.41
FOXA1-203ENST00000553751 FBXO40Q9UH90 709 aa23.87■■□□□ 1.41
FOXA1-203ENST00000553751 ANTXR2P58335 489 aa23.86■■□□□ 1.41
FOXA1-203ENST00000553751 UBE2Q1Q7Z7E8 422 aa23.86■■□□□ 1.41
FOXA1-203ENST00000553751 RNF146Q9NTX7 359 aa23.86■■□□□ 1.41
FOXA1-203ENST00000553751 DIS3Q9Y2L1 958 aaKnown RBP23.86■■□□□ 1.41
FOXA1-203ENST00000553751 DNAJC25-GNG10A0A024R161 153 aa23.85■■□□□ 1.41
FOXA1-203ENST00000553751 ICAM1P05362 532 aa23.85■■□□□ 1.41
FOXA1-203ENST00000553751 CYBAP13498 195 aa23.85■■□□□ 1.41
FOXA1-203ENST00000553751 TKFCQ3LXA3 575 aa23.85■■□□□ 1.41
FOXA1-203ENST00000553751 CHST3Q7LGC8 479 aa23.85■■□□□ 1.41
FOXA1-203ENST00000553751 TRPV1Q8NER1 839 aa23.85■■□□□ 1.41
FOXA1-203ENST00000553751 ACAD9Q9H845 621 aa23.85■■□□□ 1.41
FOXA1-203ENST00000553751 IFIT3O14879 490 aaKnown RBP23.84■■□□□ 1.41
FOXA1-203ENST00000553751 TFRCP02786 760 aaKnown RBP23.84■■□□□ 1.41
FOXA1-203ENST00000553751 TAL1P17542 331 aaPredicted RBP23.84■■□□□ 1.41
FOXA1-203ENST00000553751 CAPN2P17655 700 aa23.84■■□□□ 1.41
FOXA1-203ENST00000553751 ASPRV1Q53RT3 343 aa23.84■■□□□ 1.41
FOXA1-203ENST00000553751 CPVLQ9H3G5 476 aa23.84■■□□□ 1.41
FOXA1-203ENST00000553751 SENP2Q9HC62 589 aa23.84■■□□□ 1.41
FOXA1-203ENST00000553751 CCPG1Q9ULG6 757 aa23.84■■□□□ 1.41
FOXA1-203ENST00000553751 ALAS1P13196 640 aa23.83■■□□□ 1.41
FOXA1-203ENST00000553751 COL9A3Q14050 684 aaPredicted RBP23.83■■□□□ 1.41
FOXA1-203ENST00000553751 ANKRD35Q8N283 1001 aa23.83■■□□□ 1.41
FOXA1-203ENST00000553751 DDX11Q96FC9 970 aa23.83■■□□□ 1.41
FOXA1-203ENST00000553751 TRERF1Q96PN7 1200 aa23.83■■□□□ 1.41
FOXA1-203ENST00000553751 FRMPD3Q5JV73 1810 aa23.82■■□□□ 1.4
FOXA1-203ENST00000553751 ERICH2A1L162 156 aa23.82■■□□□ 1.4
FOXA1-203ENST00000553751 FARP2O94887 1054 aaPredicted RBP23.82■■□□□ 1.4
FOXA1-203ENST00000553751 PARP1P09874 1014 aaKnown RBP23.82■■□□□ 1.4
FOXA1-203ENST00000553751 SART3Q15020 963 aaKnown RBP23.82■■□□□ 1.4
FOXA1-203ENST00000553751 MUM1L1Q5H9M0 696 aa23.82■■□□□ 1.4
FOXA1-203ENST00000553751 LHX8Q68G74 356 aa23.82■■□□□ 1.4
FOXA1-203ENST00000553751 TINF2Q9BSI4 451 aa23.82■■□□□ 1.4
FOXA1-203ENST00000553751 UBA5Q9GZZ9 404 aa23.82■■□□□ 1.4
FOXA1-203ENST00000553751 A1CFQ9NQ94 594 aaKnown RBP23.82■■□□□ 1.4
FOXA1-203ENST00000553751 OGDHLQ9ULD0 1010 aa23.82■■□□□ 1.4
FOXA1-203ENST00000553751 SMCHD1A6NHR9 2005 aa23.81■■□□□ 1.4
FOXA1-203ENST00000553751 WTAPQ15007 396 aa23.81■■□□□ 1.4
FOXA1-203ENST00000553751 IGDCC4Q8TDY8 1250 aa23.81■■□□□ 1.4
FOXA1-203ENST00000553751 FGD4Q96M96 766 aa23.81■■□□□ 1.4
FOXA1-203ENST00000553751 WDR19Q8NEZ3 1342 aa23.81■■□□□ 1.4
FOXA1-203ENST00000553751 TMEM67Q5HYA8 995 aa23.8■■□□□ 1.4
FOXA1-203ENST00000553751 RNF20Q5VTR2 975 aa23.8■■□□□ 1.4
FOXA1-203ENST00000553751 DDX20Q9UHI6 824 aaKnown RBP23.8■■□□□ 1.4
FOXA1-203ENST00000553751 PRC1O43663 620 aa23.79■■□□□ 1.4
FOXA1-203ENST00000553751 MNX1P50219 401 aaPredicted RBP23.79■■□□□ 1.4
FOXA1-203ENST00000553751 PRAMEF19Q5SWL8 479 aa23.79■■□□□ 1.4
FOXA1-203ENST00000553751 ZNF467Q7Z7K2 595 aaPredicted RBP23.79■■□□□ 1.4
FOXA1-203ENST00000553751 ADGRF4Q8IZF3 695 aa23.79■■□□□ 1.4
FOXA1-203ENST00000553751 STAG2Q8N3U4 1231 aa23.79■■□□□ 1.4
FOXA1-203ENST00000553751 MSL3Q8N5Y2 521 aaKnown RBP23.79■■□□□ 1.4
FOXA1-203ENST00000553751 ANKLE1Q8NAG6 615 aa23.79■■□□□ 1.4
FOXA1-203ENST00000553751 MTA3Q9BTC8 594 aa23.79■■□□□ 1.4
FOXA1-203ENST00000553751 NRBP1Q9UHY1 535 aa23.79■■□□□ 1.4
FOXA1-203ENST00000553751 MAD2L2Q9UI95 211 aa23.79■■□□□ 1.4
FOXA1-203ENST00000553751 PFASO15067 1338 aa23.79■■□□□ 1.4
FOXA1-203ENST00000553751 CNGA1P29973 690 aa23.78■■□□□ 1.4
FOXA1-203ENST00000553751 MCM5P33992 734 aa23.78■■□□□ 1.4
FOXA1-203ENST00000553751 TROAPQ12815 778 aa23.78■■□□□ 1.4
FOXA1-203ENST00000553751 GRM4Q14833 912 aa23.78■■□□□ 1.4
FOXA1-203ENST00000553751 CDC37Q16543 378 aaPredicted RBP23.78■■□□□ 1.4
FOXA1-203ENST00000553751 MAMDC4Q6UXC1 1216 aa23.78■■□□□ 1.4
FOXA1-203ENST00000553751 FAM133AQ8N9E0 248 aa23.78■■□□□ 1.4
FOXA1-203ENST00000553751 DIS3LQ8TF46 1054 aaKnown RBP23.78■■□□□ 1.4
FOXA1-203ENST00000553751 LY9Q9HBG7 655 aa23.78■■□□□ 1.4
FOXA1-203ENST00000553751 GPHNQ9NQX3 736 aaPredicted RBP23.78■■□□□ 1.4
FOXA1-203ENST00000553751 PNMA2Q9UL42 364 aa23.78■■□□□ 1.4
FOXA1-203ENST00000553751 SYNGAP1Q96PV0 1343 aa23.78■■□□□ 1.4
FOXA1-203ENST00000553751 LCTP09848 1927 aa23.77■■□□□ 1.4
FOXA1-203ENST00000553751 PALM3A6NDB9 673 aaPredicted RBP23.77■■□□□ 1.4
FOXA1-203ENST00000553751 NFIBO00712 420 aa23.77■■□□□ 1.4
FOXA1-203ENST00000553751 SH2B2O14492 632 aaPredicted RBP23.77■■□□□ 1.4
FOXA1-203ENST00000553751 MSCO60682 206 aa23.77■■□□□ 1.4
FOXA1-203ENST00000553751 CNTN2Q02246 1040 aa23.77■■□□□ 1.4
FOXA1-203ENST00000553751 RASEFQ8IZ41 740 aa23.77■■□□□ 1.4
FOXA1-203ENST00000553751 CYP39A1Q9NYL5 469 aa23.77■■□□□ 1.4
FOXA1-203ENST00000553751 POTEB2H3BUK9 544 aa23.76■■□□□ 1.39
FOXA1-203ENST00000553751 SEPT4O43236 478 aa23.76■■□□□ 1.39
FOXA1-203ENST00000553751 TSGA10IPQ3SY00 556 aa23.76■■□□□ 1.39
FOXA1-203ENST00000553751 NSMFQ6X4W1 530 aa23.76■■□□□ 1.39
FOXA1-203ENST00000553751 CLEC4DQ8WXI8 215 aa23.76■■□□□ 1.39
FOXA1-203ENST00000553751 PAWRQ96IZ0 340 aaKnown RBP23.76■■□□□ 1.39
FOXA1-203ENST00000553751 JMJD4Q9H9V9 463 aa23.76■■□□□ 1.39
FOXA1-203ENST00000553751 KLRF2D3W0D1 207 aa23.75■■□□□ 1.39
FOXA1-203ENST00000553751 SNAI1O95863 264 aaPredicted RBP23.75■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms