RNA–Protein interactions for RNA: ENST00000553427.5

CPSF2-202, Transcript of cleavage and polyadenylation specific factor 2, humanhuman

TSL 4

Gene CPSF2, Length 715 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2-202ENST00000553427 RASEFQ8IZ41 740 aa21.57■■□□□ 1.04
CPSF2-202ENST00000553427 LY9Q9HBG7 655 aa21.57■■□□□ 1.04
CPSF2-202ENST00000553427 DIS3Q9Y2L1 958 aaKnown RBP21.57■■□□□ 1.04
CPSF2-202ENST00000553427 SH2B2O14492 632 aaPredicted RBP21.56■■□□□ 1.04
CPSF2-202ENST00000553427 GJB1P08034 283 aa21.56■■□□□ 1.04
CPSF2-202ENST00000553427 CAPN2P17655 700 aa21.56■■□□□ 1.04
CPSF2-202ENST00000553427 LIFRP42702 1097 aa21.56■■□□□ 1.04
CPSF2-202ENST00000553427 TROAPQ12815 778 aa21.56■■□□□ 1.04
CPSF2-202ENST00000553427 CCL14Q16627 93 aa21.56■■□□□ 1.04
CPSF2-202ENST00000553427 CHST3Q7LGC8 479 aa21.56■■□□□ 1.04
CPSF2-202ENST00000553427 TMTC2Q8N394 836 aa21.56■■□□□ 1.04
CPSF2-202ENST00000553427 NPLOC4Q8TAT6 608 aa21.56■■□□□ 1.04
CPSF2-202ENST00000553427 AGBL1Q96MI9 1066 aa21.56■■□□□ 1.04
CPSF2-202ENST00000553427 NEK1Q96PY6 1258 aa21.56■■□□□ 1.04
CPSF2-202ENST00000553427 MAP3K14Q99558 947 aa21.56■■□□□ 1.04
CPSF2-202ENST00000553427 PAK6Q9NQU5 681 aaPredicted RBP21.56■■□□□ 1.04
CPSF2-202ENST00000553427 DNAJC25-GNG10A0A024R161 153 aa21.55■■□□□ 1.04
CPSF2-202ENST00000553427 POTEFA5A3E0 1075 aa21.55■■□□□ 1.04
CPSF2-202ENST00000553427 GOLGA8HP0CJ92 632 aa21.55■■□□□ 1.04
CPSF2-202ENST00000553427 GRM4Q14833 912 aa21.55■■□□□ 1.04
CPSF2-202ENST00000553427 CCDC174Q6PII3 467 aa21.55■■□□□ 1.04
CPSF2-202ENST00000553427 CATIPQ7Z7H3 387 aa21.55■■□□□ 1.04
CPSF2-202ENST00000553427 UNC93B1Q9H1C4 597 aa21.55■■□□□ 1.04
CPSF2-202ENST00000553427 ACAD9Q9H845 621 aa21.55■■□□□ 1.04
CPSF2-202ENST00000553427 SENP2Q9HC62 589 aa21.55■■□□□ 1.04
CPSF2-202ENST00000553427 RNF146Q9NTX7 359 aa21.55■■□□□ 1.04
CPSF2-202ENST00000553427 CCPG1Q9ULG6 757 aa21.55■■□□□ 1.04
CPSF2-202ENST00000553427 RPTORQ8N122 1335 aa21.55■■□□□ 1.04
CPSF2-202ENST00000553427 PALM3A6NDB9 673 aaPredicted RBP21.54■■□□□ 1.04
CPSF2-202ENST00000553427 DDAH1O94760 285 aa21.54■■□□□ 1.04
CPSF2-202ENST00000553427 HMGB1P09429 215 aaKnown RBP21.54■■□□□ 1.04
CPSF2-202ENST00000553427 PRKAR2AP13861 404 aaKnown RBP21.54■■□□□ 1.04
CPSF2-202ENST00000553427 COL9A3Q14050 684 aaPredicted RBP21.54■■□□□ 1.04
CPSF2-202ENST00000553427 ZNF792Q3KQV3 632 aa21.54■■□□□ 1.04
CPSF2-202ENST00000553427 MFSD14CQ5VZR4 134 aa21.54■■□□□ 1.04
CPSF2-202ENST00000553427 RNF208Q9H0X6 261 aa21.54■■□□□ 1.04
CPSF2-202ENST00000553427 FLRT1Q9NZU1 646 aa21.54■■□□□ 1.04
CPSF2-202ENST00000553427 MAD2L2Q9UI95 211 aa21.54■■□□□ 1.04
CPSF2-202ENST00000553427 SNAP25P60880 206 aa21.53■■□□□ 1.04
CPSF2-202ENST00000553427 TRIM32Q13049 653 aa21.53■■□□□ 1.04
CPSF2-202ENST00000553427 DHX32Q7L7V1 743 aaKnown RBP21.53■■□□□ 1.04
CPSF2-202ENST00000553427 SGMS1Q86VZ5 419 aa21.53■■□□□ 1.04
CPSF2-202ENST00000553427 MAML3Q96JK9 1138 aa21.53■■□□□ 1.04
CPSF2-202ENST00000553427 XRN2Q9H0D6 950 aaKnown RBP eCLIP21.53■■□□□ 1.04
CPSF2-202ENST00000553427 HMX1Q9NP08 348 aaPredicted RBP21.53■■□□□ 1.04
CPSF2-202ENST00000553427 MYCP01106 439 aaPredicted RBP21.52■■□□□ 1.04
CPSF2-202ENST00000553427 ALAS1P13196 640 aa21.52■■□□□ 1.04
CPSF2-202ENST00000553427 GJA8P48165 433 aa21.52■■□□□ 1.04
CPSF2-202ENST00000553427 EXOSC10Q01780 885 aaKnown RBP21.52■■□□□ 1.04
CPSF2-202ENST00000553427 CACNB2Q08289 660 aaPredicted RBP21.52■■□□□ 1.04
CPSF2-202ENST00000553427 ADCK5Q3MIX3 580 aa21.52■■□□□ 1.04
CPSF2-202ENST00000553427 ZNF467Q7Z7K2 595 aaPredicted RBP21.52■■□□□ 1.04
CPSF2-202ENST00000553427 ADGRF4Q8IZF3 695 aa21.52■■□□□ 1.04
CPSF2-202ENST00000553427 ZNF654Q8IZM8 581 aa21.52■■□□□ 1.04
CPSF2-202ENST00000553427 MSL3Q8N5Y2 521 aaKnown RBP21.52■■□□□ 1.04
CPSF2-202ENST00000553427 TRERF1Q96PN7 1200 aa21.52■■□□□ 1.04
CPSF2-202ENST00000553427 UBA5Q9GZZ9 404 aa21.52■■□□□ 1.04
CPSF2-202ENST00000553427 HOMER2Q9NSB8 354 aa21.52■■□□□ 1.04
CPSF2-202ENST00000553427 SNX14Q9Y5W7 946 aa21.52■■□□□ 1.04
CPSF2-202ENST00000553427 PFASO15067 1338 aa21.52■■□□□ 1.03
CPSF2-202ENST00000553427 KLRF2D3W0D1 207 aa21.51■■□□□ 1.03
CPSF2-202ENST00000553427 EIF5BO60841 1220 aaKnown RBP21.51■■□□□ 1.03
CPSF2-202ENST00000553427 PGK2P07205 417 aa21.51■■□□□ 1.03
CPSF2-202ENST00000553427 ANKRD35Q8N283 1001 aa21.51■■□□□ 1.03
CPSF2-202ENST00000553427 STAG2Q8N3U4 1231 aa21.51■■□□□ 1.03
CPSF2-202ENST00000553427 MTMR8Q96EF0 704 aa21.51■■□□□ 1.03
CPSF2-202ENST00000553427 DDX11Q96FC9 970 aa21.51■■□□□ 1.03
CPSF2-202ENST00000553427 USP26Q9BXU7 913 aa21.51■■□□□ 1.03
CPSF2-202ENST00000553427 MAF1Q9H063 256 aa21.51■■□□□ 1.03
CPSF2-202ENST00000553427 A1CFQ9NQ94 594 aaKnown RBP21.51■■□□□ 1.03
CPSF2-202ENST00000553427 GPHNQ9NQX3 736 aaPredicted RBP21.51■■□□□ 1.03
CPSF2-202ENST00000553427 NRBP1Q9UHY1 535 aa21.51■■□□□ 1.03
CPSF2-202ENST00000553427 SLC4A3P48751 1232 aa21.5■■□□□ 1.03
CPSF2-202ENST00000553427 CDC37Q16543 378 aaPredicted RBP21.5■■□□□ 1.03
CPSF2-202ENST00000553427 SHISA4Q96DD7 197 aa21.5■■□□□ 1.03
CPSF2-202ENST00000553427 CRISPLD2Q9H0B8 497 aa21.5■■□□□ 1.03
CPSF2-202ENST00000553427 CPVLQ9H3G5 476 aa21.5■■□□□ 1.03
CPSF2-202ENST00000553427 JMJD4Q9H9V9 463 aa21.5■■□□□ 1.03
CPSF2-202ENST00000553427 ZNFX1Q9P2E3 1918 aaKnown RBP21.49■■□□□ 1.03
CPSF2-202ENST00000553427 CCDC69A6NI79 296 aa21.49■■□□□ 1.03
CPSF2-202ENST00000553427 SGPL1O95470 568 aa21.49■■□□□ 1.03
CPSF2-202ENST00000553427 CALM1P0DP23 149 aa21.49■■□□□ 1.03
CPSF2-202ENST00000553427 CALM2P0DP24 149 aa21.49■■□□□ 1.03
CPSF2-202ENST00000553427 CALM3P0DP25 149 aa21.49■■□□□ 1.03
CPSF2-202ENST00000553427 CYBAP13498 195 aa21.49■■□□□ 1.03
CPSF2-202ENST00000553427 EN2P19622 333 aaPredicted RBP21.49■■□□□ 1.03
CPSF2-202ENST00000553427 KIF5BP33176 963 aa21.49■■□□□ 1.03
CPSF2-202ENST00000553427 CYP2C19P33261 490 aa21.49■■□□□ 1.03
CPSF2-202ENST00000553427 MUM1L1Q5H9M0 696 aa21.49■■□□□ 1.03
CPSF2-202ENST00000553427 NFXL1Q6ZNB6 911 aa21.49■■□□□ 1.03
CPSF2-202ENST00000553427 FAM133AQ8N9E0 248 aa21.49■■□□□ 1.03
CPSF2-202ENST00000553427 U2AF1L4Q8WU68 220 aaKnown RBP21.49■■□□□ 1.03
CPSF2-202ENST00000553427 RIOX1Q9H6W3 641 aa21.49■■□□□ 1.03
CPSF2-202ENST00000553427 SYNGAP1Q96PV0 1343 aa21.49■■□□□ 1.03
CPSF2-202ENST00000553427 PLXNA1Q9UIW2 1896 aa21.48■■□□□ 1.03
CPSF2-202ENST00000553427 SMARCA1P28370 1054 aa21.48■■□□□ 1.03
CPSF2-202ENST00000553427 MAMDC4Q6UXC1 1216 aa21.48■■□□□ 1.03
CPSF2-202ENST00000553427 FBXL16Q8N461 479 aa21.48■■□□□ 1.03
CPSF2-202ENST00000553427 CTCFLQ8NI51 663 aaPredicted RBP21.48■■□□□ 1.03
CPSF2-202ENST00000553427 CLEC4DQ8WXI8 215 aa21.48■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms