RNA–Protein interactions for RNA: ENST00000551355.5

NEK3-203, Transcript of NIMA related kinase 3, humanhuman

TSL 5

Gene NEK3, Length 727 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-203ENST00000551355 STXBP3O00186 592 aa11.96□□□□□ -0.49
NEK3-203ENST00000551355 U2AF2P26368 475 aaKnown RBP eCLIP11.96□□□□□ -0.491e-7■■□□□ 13.2
NEK3-203ENST00000551355 KRT2P35908 639 aa11.96□□□□□ -0.49
NEK3-203ENST00000551355 MRPL12P52815 198 aaKnown RBP11.96□□□□□ -0.49
NEK3-203ENST00000551355 OAZ1P54368 228 aa11.96□□□□□ -0.49
NEK3-203ENST00000551355 NAPAP54920 295 aa11.96□□□□□ -0.49
NEK3-203ENST00000551355 FMR1Q06787 632 aaKnown RBP eCLIP11.96□□□□□ -0.49
NEK3-203ENST00000551355 PKP1Q13835 747 aa11.96□□□□□ -0.49
NEK3-203ENST00000551355 QRICH1Q2TAL8 776 aa11.96□□□□□ -0.49
NEK3-203ENST00000551355 WWC2Q6AWC2 1192 aa11.96□□□□□ -0.49
NEK3-203ENST00000551355 MB21D1Q8N884 522 aa11.96□□□□□ -0.49
NEK3-203ENST00000551355 DAGLBQ8NCG7 672 aa11.96□□□□□ -0.49
NEK3-203ENST00000551355 GTF3C2Q8WUA4 911 aaPredicted RBP11.96□□□□□ -0.49
NEK3-203ENST00000551355 PIBF1Q8WXW3 757 aa11.96□□□□□ -0.49
NEK3-203ENST00000551355 AIFM3Q96NN9 605 aa11.96□□□□□ -0.49
NEK3-203ENST00000551355 MAF1Q9H063 256 aa11.96□□□□□ -0.49
NEK3-203ENST00000551355 ZMYND12Q9H0C1 365 aa11.96□□□□□ -0.49
NEK3-203ENST00000551355 CPVLQ9H3G5 476 aa11.96□□□□□ -0.49
NEK3-203ENST00000551355 VPS54Q9P1Q0 977 aa11.96□□□□□ -0.49
NEK3-203ENST00000551355 PCDHA4Q9UN74 947 aa11.96□□□□□ -0.49
NEK3-203ENST00000551355 AGTPBP1Q9UPW5 1226 aa11.96□□□□□ -0.49
NEK3-203ENST00000551355 PCDHA1Q9Y5I3 950 aa11.96□□□□□ -0.49
NEK3-203ENST00000551355 MYH4Q9Y623 1939 aa11.96□□□□□ -0.5
NEK3-203ENST00000551355 TMEM88BA6NKF7 163 aa11.95□□□□□ -0.5
NEK3-203ENST00000551355 ICAM1P05362 532 aa11.95□□□□□ -0.5
NEK3-203ENST00000551355 OSBPP22059 807 aa11.95□□□□□ -0.5
NEK3-203ENST00000551355 DSG3P32926 999 aa11.95□□□□□ -0.5
NEK3-203ENST00000551355 GUCY1B3Q02153 619 aa11.95□□□□□ -0.5
NEK3-203ENST00000551355 KIF23Q02241 960 aaPredicted RBP11.95□□□□□ -0.5
NEK3-203ENST00000551355 CSPP1Q1MSJ5 1256 aa11.95□□□□□ -0.5
NEK3-203ENST00000551355 SPRYD7Q5W111 196 aa11.95□□□□□ -0.5
NEK3-203ENST00000551355 GADL1Q6ZQY3 521 aa11.95□□□□□ -0.5
NEK3-203ENST00000551355 SAPCD2Q86UD0 394 aa11.95□□□□□ -0.5
NEK3-203ENST00000551355 DIS3L2Q8IYB7 885 aaKnown RBP11.95□□□□□ -0.5
NEK3-203ENST00000551355 SAMD3Q8N6K7 520 aa11.95□□□□□ -0.5
NEK3-203ENST00000551355 TNPO1Q92973 898 aaKnown RBP11.95□□□□□ -0.5
NEK3-203ENST00000551355 CCDC102AQ96A19 550 aa11.95□□□□□ -0.5
NEK3-203ENST00000551355 SLC38A10Q9HBR0 1119 aa11.95□□□□□ -0.5
NEK3-203ENST00000551355 PNMA3Q9UL41 463 aa11.95□□□□□ -0.5
NEK3-203ENST00000551355 ADAMTS5Q9UNA0 930 aa11.95□□□□□ -0.5
NEK3-203ENST00000551355 MRPL11Q9Y3B7 192 aaKnown RBP11.95□□□□□ -0.5
NEK3-203ENST00000551355 TLL2Q9Y6L7 1015 aa11.95□□□□□ -0.5
NEK3-203ENST00000551355 ATAD5Q96QE3 1844 aa11.95□□□□□ -0.5
NEK3-203ENST00000551355 ABCB11O95342 1321 aa11.94□□□□□ -0.5
NEK3-203ENST00000551355 SMCO2A6NFE2 343 aa11.94□□□□□ -0.5
NEK3-203ENST00000551355 GOLGA6L22H0YM25 854 aa11.94□□□□□ -0.5
NEK3-203ENST00000551355 VWA5AO00534 786 aa11.94□□□□□ -0.5
NEK3-203ENST00000551355 ATP2A1O14983 1001 aa11.94□□□□□ -0.5
NEK3-203ENST00000551355 DTNBO60941 627 aa11.94□□□□□ -0.5
NEK3-203ENST00000551355 ZNF157P51786 506 aaPredicted RBP11.94□□□□□ -0.5
NEK3-203ENST00000551355 ADCY7P51828 1080 aa11.94□□□□□ -0.5
NEK3-203ENST00000551355 FOSBP53539 338 aa11.94□□□□□ -0.5
NEK3-203ENST00000551355 INHBEP58166 350 aa11.94□□□□□ -0.5
NEK3-203ENST00000551355 IRX3P78415 501 aaPredicted RBP11.94□□□□□ -0.5
NEK3-203ENST00000551355 RESTQ13127 1097 aa11.94□□□□□ -0.5
NEK3-203ENST00000551355 OTUD7BQ6GQQ9 843 aa11.94□□□□□ -0.5
NEK3-203ENST00000551355 RGMBQ6NW40 437 aa11.94□□□□□ -0.5
NEK3-203ENST00000551355 LBX2Q6XYB7 198 aa11.94□□□□□ -0.5
NEK3-203ENST00000551355 NOSTRINQ8IVI9 506 aa11.94□□□□□ -0.5
NEK3-203ENST00000551355 BLIDQ8IZY5 108 aa11.94□□□□□ -0.5
NEK3-203ENST00000551355 ZNF784Q8NCA9 323 aaPredicted RBP11.94□□□□□ -0.5
NEK3-203ENST00000551355 GPKOWQ92917 476 aaPredicted RBP eCLIP11.94□□□□□ -0.5
NEK3-203ENST00000551355 CUL5Q93034 780 aa11.94□□□□□ -0.5
NEK3-203ENST00000551355 ZNF396Q96N95 335 aaPredicted RBP11.94□□□□□ -0.5
NEK3-203ENST00000551355 PSTPIP2Q9H939 334 aa11.94□□□□□ -0.5
NEK3-203ENST00000551355 RIC8AQ9NPQ8 531 aa11.94□□□□□ -0.5
NEK3-203ENST00000551355 FBXO28Q9NVF7 368 aa11.94□□□□□ -0.5
NEK3-203ENST00000551355 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.94□□□□□ -0.5
NEK3-203ENST00000551355 CFAP45Q9UL16 551 aa11.94□□□□□ -0.5
NEK3-203ENST00000551355 KCNJ14Q9UNX9 436 aa11.94□□□□□ -0.5
NEK3-203ENST00000551355 MANSC4A6NHS7 340 aaPredicted RBP11.93□□□□□ -0.5
NEK3-203ENST00000551355 PTMSP20962 102 aa11.93□□□□□ -0.5
NEK3-203ENST00000551355 GJA5P36382 358 aa11.93□□□□□ -0.5
NEK3-203ENST00000551355 TRAPPC10P48553 1259 aa11.93□□□□□ -0.5
NEK3-203ENST00000551355 KRT85P78386 507 aa11.93□□□□□ -0.5
NEK3-203ENST00000551355 TKFCQ3LXA3 575 aa11.93□□□□□ -0.5
NEK3-203ENST00000551355 RILPL1Q5EBL4 403 aa11.93□□□□□ -0.5
NEK3-203ENST00000551355 ANKRD23Q86SG2 305 aa11.93□□□□□ -0.5
NEK3-203ENST00000551355 FERMT3Q86UX7 667 aa11.93□□□□□ -0.5
NEK3-203ENST00000551355 MCF2L2Q86YR7 1114 aa11.93□□□□□ -0.5
NEK3-203ENST00000551355 MS4A4AQ96JQ5 239 aa11.93□□□□□ -0.5
NEK3-203ENST00000551355 ZCCHC17Q9NP64 241 aaKnown RBP11.93□□□□□ -0.5
NEK3-203ENST00000551355 MAP3K20Q9NYL2 800 aaKnown RBP11.93□□□□□ -0.5
NEK3-203ENST00000551355 CCL15-CCL14A0A0B4J2E2 113 aa11.92□□□□□ -0.5
NEK3-203ENST00000551355 TESPA1A2RU30 521 aaPredicted RBP11.92□□□□□ -0.5
NEK3-203ENST00000551355 BTBD18B2RXH4 712 aa11.92□□□□□ -0.5
NEK3-203ENST00000551355 PPP1R11O60927 126 aaPredicted RBP11.92□□□□□ -0.5
NEK3-203ENST00000551355 FOSP01100 380 aaPredicted RBP11.92□□□□□ -0.5
NEK3-203ENST00000551355 COPB2P35606 906 aa11.92□□□□□ -0.5
NEK3-203ENST00000551355 DGKZQ13574 1117 aa11.92□□□□□ -0.5
NEK3-203ENST00000551355 MOGSQ13724 837 aa11.92□□□□□ -0.5
NEK3-203ENST00000551355 CCL15Q16663 113 aa11.92□□□□□ -0.5
NEK3-203ENST00000551355 TREML2Q5T2D2 321 aa11.92□□□□□ -0.5
NEK3-203ENST00000551355 FOXD4L5Q5VV16 416 aaPredicted RBP11.92□□□□□ -0.5
NEK3-203ENST00000551355 KRT25Q7Z3Z0 450 aa11.92□□□□□ -0.5
NEK3-203ENST00000551355 REXO1Q8N1G1 1221 aaKnown RBP11.92□□□□□ -0.5
NEK3-203ENST00000551355 FOXD4L4Q8WXT5 416 aaPredicted RBP11.92□□□□□ -0.5
NEK3-203ENST00000551355 COA7Q96BR5 231 aa11.92□□□□□ -0.5
NEK3-203ENST00000551355 SCAND2PQ9GZW5 306 aaPredicted RBP11.92□□□□□ -0.5
NEK3-203ENST00000551355 GJB4Q9NTQ9 266 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms