RNA–Protein interactions for RNA: ENST00000550692.1

BRF1-218, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 4

Gene BRF1, Length 600 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-218ENST00000550692 MAML3Q96JK9 1138 aa13.2□□□□□ -0.3
BRF1-218ENST00000550692 LSG1Q9H089 658 aaKnown RBP13.2□□□□□ -0.3
BRF1-218ENST00000550692 E7EWF7 191 aa13.19□□□□□ -0.3
BRF1-218ENST00000550692 GOLGA8HP0CJ92 632 aa13.19□□□□□ -0.3
BRF1-218ENST00000550692 TAL1P17542 331 aaPredicted RBP13.19□□□□□ -0.3
BRF1-218ENST00000550692 TRDNQ13061 729 aa13.19□□□□□ -0.3
BRF1-218ENST00000550692 PRAMEF19Q5SWL8 479 aa13.19□□□□□ -0.3
BRF1-218ENST00000550692 SYDE2Q5VT97 1194 aa13.19□□□□□ -0.3
BRF1-218ENST00000550692 LHX8Q68G74 356 aa13.19□□□□□ -0.3
BRF1-218ENST00000550692 CHST13Q8NET6 341 aa13.19□□□□□ -0.3
BRF1-218ENST00000550692 DDX11Q96FC9 970 aa13.19□□□□□ -0.3
BRF1-218ENST00000550692 UBAC1Q9BSL1 405 aa13.19□□□□□ -0.3
BRF1-218ENST00000550692 KAT14Q9H8E8 782 aa13.19□□□□□ -0.3
BRF1-218ENST00000550692 HOMER2Q9NSB8 354 aa13.19□□□□□ -0.3
BRF1-218ENST00000550692 PCDH10Q9P2E7 1040 aa13.19□□□□□ -0.3
BRF1-218ENST00000550692 DIS3Q9Y2L1 958 aaKnown RBP13.19□□□□□ -0.3
BRF1-218ENST00000550692 PLXNA1Q9UIW2 1896 aa13.19□□□□□ -0.3
BRF1-218ENST00000550692 SMCHD1A6NHR9 2005 aa13.18□□□□□ -0.3
BRF1-218ENST00000550692 DNAJC25-GNG10A0A024R161 153 aa13.18□□□□□ -0.3
BRF1-218ENST00000550692 ALAS1P13196 640 aa13.18□□□□□ -0.3
BRF1-218ENST00000550692 CYBAP13498 195 aa13.18□□□□□ -0.3
BRF1-218ENST00000550692 CNGA1P29973 690 aa13.18□□□□□ -0.3
BRF1-218ENST00000550692 MNX1P50219 401 aaPredicted RBP13.18□□□□□ -0.3
BRF1-218ENST00000550692 SEC23AQ15436 765 aa13.18□□□□□ -0.3
BRF1-218ENST00000550692 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.18□□□□□ -0.3
BRF1-218ENST00000550692 ANKRD35Q8N283 1001 aa13.18□□□□□ -0.3
BRF1-218ENST00000550692 NCOA7Q8NI08 942 aa13.18□□□□□ -0.3
BRF1-218ENST00000550692 DIS3LQ8TF46 1054 aaKnown RBP13.18□□□□□ -0.3
BRF1-218ENST00000550692 PAWRQ96IZ0 340 aaKnown RBP13.18□□□□□ -0.3
BRF1-218ENST00000550692 UBA5Q9GZZ9 404 aa13.18□□□□□ -0.3
BRF1-218ENST00000550692 RANBP17Q9H2T7 1088 aaKnown RBP13.18□□□□□ -0.3
BRF1-218ENST00000550692 CPVLQ9H3G5 476 aa13.18□□□□□ -0.3
BRF1-218ENST00000550692 RNF146Q9NTX7 359 aa13.18□□□□□ -0.3
BRF1-218ENST00000550692 FBXO40Q9UH90 709 aa13.18□□□□□ -0.3
BRF1-218ENST00000550692 OGDHLQ9ULD0 1010 aa13.18□□□□□ -0.3
BRF1-218ENST00000550692 ICAM1P05362 532 aa13.17□□□□□ -0.3
BRF1-218ENST00000550692 CAPN2P17655 700 aa13.17□□□□□ -0.3
BRF1-218ENST00000550692 MUM1L1Q5H9M0 696 aa13.17□□□□□ -0.3
BRF1-218ENST00000550692 IFIT1BQ5T764 474 aaKnown RBP13.17□□□□□ -0.3
BRF1-218ENST00000550692 CHST3Q7LGC8 479 aa13.17□□□□□ -0.3
BRF1-218ENST00000550692 RALYLQ86SE5 291 aaKnown RBP13.17□□□□□ -0.3
BRF1-218ENST00000550692 TRERF1Q96PN7 1200 aa13.17□□□□□ -0.3
BRF1-218ENST00000550692 TINF2Q9BSI4 451 aa13.17□□□□□ -0.3
BRF1-218ENST00000550692 ACAD9Q9H845 621 aa13.17□□□□□ -0.3
BRF1-218ENST00000550692 ANO2Q9NQ90 1003 aa13.17□□□□□ -0.3
BRF1-218ENST00000550692 DDX20Q9UHI6 824 aaKnown RBP13.17□□□□□ -0.3
BRF1-218ENST00000550692 CCPG1Q9ULG6 757 aa13.17□□□□□ -0.3
BRF1-218ENST00000550692 SLC27A2O14975 620 aa13.16□□□□□ -0.3
BRF1-218ENST00000550692 NECTIN1Q15223 517 aa13.16□□□□□ -0.3
BRF1-218ENST00000550692 TKFCQ3LXA3 575 aa13.16□□□□□ -0.3
BRF1-218ENST00000550692 GPATCH4Q5T3I0 446 aaKnown RBP13.16□□□□□ -0.3
BRF1-218ENST00000550692 ANO1Q5XXA6 986 aa13.16□□□□□ -0.3
BRF1-218ENST00000550692 ANKLE1Q8NAG6 615 aa13.16□□□□□ -0.3
BRF1-218ENST00000550692 FGD4Q96M96 766 aa13.16□□□□□ -0.3
BRF1-218ENST00000550692 SENP2Q9HC62 589 aa13.16□□□□□ -0.3
BRF1-218ENST00000550692 A1CFQ9NQ94 594 aaKnown RBP13.16□□□□□ -0.3
BRF1-218ENST00000550692 IFIT3O14879 490 aaKnown RBP13.15□□□□□ -0.3
BRF1-218ENST00000550692 REC8O95072 547 aa13.15□□□□□ -0.3
BRF1-218ENST00000550692 SNAI1O95863 264 aaPredicted RBP13.15□□□□□ -0.3
BRF1-218ENST00000550692 ANTXR2P58335 489 aa13.15□□□□□ -0.3
BRF1-218ENST00000550692 CNTN2Q02246 1040 aa13.15□□□□□ -0.3
BRF1-218ENST00000550692 COL9A3Q14050 684 aaPredicted RBP13.15□□□□□ -0.3
BRF1-218ENST00000550692 CREB3L3Q68CJ9 461 aa13.15□□□□□ -0.3
BRF1-218ENST00000550692 NECAB2Q7Z6G3 386 aa13.15□□□□□ -0.3
BRF1-218ENST00000550692 MB21D2Q8IYB1 491 aaPredicted RBP13.15□□□□□ -0.3
BRF1-218ENST00000550692 POTEB2H3BUK9 544 aa13.14□□□□□ -0.31
BRF1-218ENST00000550692 SEPT4O43236 478 aa13.14□□□□□ -0.31
BRF1-218ENST00000550692 EPB41L2O43491 1005 aaKnown RBP13.14□□□□□ -0.31
BRF1-218ENST00000550692 MSCO60682 206 aa13.14□□□□□ -0.31
BRF1-218ENST00000550692 PARP1P09874 1014 aaKnown RBP13.14□□□□□ -0.31
BRF1-218ENST00000550692 C8orf34Q49A92 452 aa13.14□□□□□ -0.31
BRF1-218ENST00000550692 ASPRV1Q53RT3 343 aa13.14□□□□□ -0.31
BRF1-218ENST00000550692 MAMDC4Q6UXC1 1216 aa13.14□□□□□ -0.31
BRF1-218ENST00000550692 NSMFQ6X4W1 530 aa13.14□□□□□ -0.31
BRF1-218ENST00000550692 STAG2Q8N3U4 1231 aa13.14□□□□□ -0.31
BRF1-218ENST00000550692 FAM133AQ8N9E0 248 aa13.14□□□□□ -0.31
BRF1-218ENST00000550692 IGDCC4Q8TDY8 1250 aa13.14□□□□□ -0.31
BRF1-218ENST00000550692 DPF3Q92784 378 aa13.14□□□□□ -0.31
BRF1-218ENST00000550692 HTATIP2Q9BUP3 242 aa13.14□□□□□ -0.31
BRF1-218ENST00000550692 FRMPD3Q5JV73 1810 aa13.13□□□□□ -0.31
BRF1-218ENST00000550692 MCM3APO60318 1980 aa13.13□□□□□ -0.31
BRF1-218ENST00000550692 ERICH2A1L162 156 aa13.13□□□□□ -0.31
BRF1-218ENST00000550692 SOWAHBA6NEL2 793 aa13.13□□□□□ -0.31
BRF1-218ENST00000550692 NFIBO00712 420 aa13.13□□□□□ -0.31
BRF1-218ENST00000550692 ZNF865P0CJ78 1059 aaPredicted RBP13.13□□□□□ -0.31
BRF1-218ENST00000550692 WTAPQ15007 396 aa13.13□□□□□ -0.31
BRF1-218ENST00000550692 TMEM67Q5HYA8 995 aa13.13□□□□□ -0.31
BRF1-218ENST00000550692 HABP4Q5JVS0 413 aaKnown RBP13.13□□□□□ -0.31
BRF1-218ENST00000550692 ZNF467Q7Z7K2 595 aaPredicted RBP13.13□□□□□ -0.31
BRF1-218ENST00000550692 ADGRF4Q8IZF3 695 aa13.13□□□□□ -0.31
BRF1-218ENST00000550692 MSL3Q8N5Y2 521 aaKnown RBP13.13□□□□□ -0.31
BRF1-218ENST00000550692 PURBQ96QR8 312 aaKnown RBP13.13□□□□□ -0.31
BRF1-218ENST00000550692 C11orf49Q9H6J7 331 aa13.13□□□□□ -0.31
BRF1-218ENST00000550692 VAT1LQ9HCJ6 419 aa13.13□□□□□ -0.31
BRF1-218ENST00000550692 GPHNQ9NQX3 736 aaPredicted RBP13.13□□□□□ -0.31
BRF1-218ENST00000550692 CYP39A1Q9NYL5 469 aa13.13□□□□□ -0.31
BRF1-218ENST00000550692 NRBP1Q9UHY1 535 aa13.13□□□□□ -0.31
BRF1-218ENST00000550692 CNPY2Q9Y2B0 182 aa13.13□□□□□ -0.31
BRF1-218ENST00000550692 PFASO15067 1338 aa13.13□□□□□ -0.31
BRF1-218ENST00000550692 SYNGAP1Q96PV0 1343 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms