RNA–Protein interactions for RNA: ENST00000550188.1

ARFGAP1-223, Transcript of ADP ribosylation factor GTPase activating protein 1, human

TSL 5

Gene ARFGAP1, Length 572 nt, Biotype protein coding, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ARFGAP1-223	ENST00000550188	DHX30	Q7L2E3	1194 aa	Known RBP eCLIP	13.99	□□□□□ -0.17
ARFGAP1-223	ENST00000550188	MAML3	Q96JK9	1138 aa		13.99	□□□□□ -0.17
ARFGAP1-223	ENST00000550188	CRISPLD2	Q9H0B8	497 aa		13.99	□□□□□ -0.17
ARFGAP1-223	ENST00000550188	RANBP17	Q9H2T7	1088 aa	Known RBP	13.99	□□□□□ -0.17
ARFGAP1-223	ENST00000550188	HOMER2	Q9NSB8	354 aa		13.99	□□□□□ -0.17
ARFGAP1-223	ENST00000550188	DIS3	Q9Y2L1	958 aa	Known RBP	13.99	□□□□□ -0.17
ARFGAP1-223	ENST00000550188	ICAM1	P05362	532 aa		13.98	□□□□□ -0.17
ARFGAP1-223	ENST00000550188	CCND3	P30281	292 aa	Predicted RBP	13.98	□□□□□ -0.17
ARFGAP1-223	ENST00000550188	SNAP25	P60880	206 aa		13.98	□□□□□ -0.17
ARFGAP1-223	ENST00000550188	SEC23A	Q15436	765 aa		13.98	□□□□□ -0.17
ARFGAP1-223	ENST00000550188	ZNF792	Q3KQV3	632 aa		13.98	□□□□□ -0.17
ARFGAP1-223	ENST00000550188	ASPRV1	Q53RT3	343 aa		13.98	□□□□□ -0.17
ARFGAP1-223	ENST00000550188	ANKRD35	Q8N283	1001 aa		13.98	□□□□□ -0.17
ARFGAP1-223	ENST00000550188	DDX11	Q96FC9	970 aa		13.98	□□□□□ -0.17
ARFGAP1-223	ENST00000550188	AGBL1	Q96MI9	1066 aa		13.98	□□□□□ -0.17
ARFGAP1-223	ENST00000550188	ACAD9	Q9H845	621 aa		13.98	□□□□□ -0.17
ARFGAP1-223	ENST00000550188	RNF146	Q9NTX7	359 aa		13.98	□□□□□ -0.17
ARFGAP1-223	ENST00000550188	CCPG1	Q9ULG6	757 aa		13.98	□□□□□ -0.17
ARFGAP1-223	ENST00000550188	DNAJC25-GNG10	A0A024R161	153 aa		13.97	□□□□□ -0.17
ARFGAP1-223	ENST00000550188	IFIT3	O14879	490 aa	Known RBP	13.97	□□□□□ -0.17
ARFGAP1-223	ENST00000550188	SLC27A2	O14975	620 aa		13.97	□□□□□ -0.17
ARFGAP1-223	ENST00000550188	FARP2	O94887	1054 aa	Predicted RBP	13.97	□□□□□ -0.17
ARFGAP1-223	ENST00000550188	ALAS1	P13196	640 aa		13.97	□□□□□ -0.17
ARFGAP1-223	ENST00000550188	CYBA	P13498	195 aa		13.97	□□□□□ -0.17
ARFGAP1-223	ENST00000550188	NECTIN1	Q15223	517 aa		13.97	□□□□□ -0.17
ARFGAP1-223	ENST00000550188	RNF20	Q5VTR2	975 aa		13.97	□□□□□ -0.17
ARFGAP1-223	ENST00000550188	CREB3L3	Q68CJ9	461 aa		13.97	□□□□□ -0.17
ARFGAP1-223	ENST00000550188	MB21D2	Q8IYB1	491 aa	Predicted RBP	13.97	□□□□□ -0.17
ARFGAP1-223	ENST00000550188	ANKLE1	Q8NAG6	615 aa		13.97	□□□□□ -0.17
ARFGAP1-223	ENST00000550188	TRERF1	Q96PN7	1200 aa		13.97	□□□□□ -0.17
ARFGAP1-223	ENST00000550188	PNMA2	Q9UL42	364 aa		13.97	□□□□□ -0.17
ARFGAP1-223	ENST00000550188	MSC	O60682	206 aa		13.96	□□□□□ -0.17
ARFGAP1-223	ENST00000550188	PARP1	P09874	1014 aa	Known RBP	13.96	□□□□□ -0.17
ARFGAP1-223	ENST00000550188	GOLGA8H	P0CJ92	632 aa		13.96	□□□□□ -0.17
ARFGAP1-223	ENST00000550188	WTAP	Q15007	396 aa		13.96	□□□□□ -0.17
ARFGAP1-223	ENST00000550188	UBE2Q1	Q7Z7E8	422 aa		13.96	□□□□□ -0.17
ARFGAP1-223	ENST00000550188	MSL3	Q8N5Y2	521 aa	Known RBP	13.96	□□□□□ -0.17
ARFGAP1-223	ENST00000550188	TINF2	Q9BSI4	451 aa		13.96	□□□□□ -0.17
ARFGAP1-223	ENST00000550188	MTA3	Q9BTC8	594 aa		13.96	□□□□□ -0.17
ARFGAP1-223	ENST00000550188	NRBP1	Q9UHY1	535 aa		13.96	□□□□□ -0.17
ARFGAP1-223	ENST00000550188	CENPF	P49454	3210 aa		13.96	□□□□□ -0.17
ARFGAP1-223	ENST00000550188	PFAS	O15067	1338 aa		13.95	□□□□□ -0.18
ARFGAP1-223	ENST00000550188	WDR19	Q8NEZ3	1342 aa		13.95	□□□□□ -0.18
ARFGAP1-223	ENST00000550188	CNGA1	P29973	690 aa		13.95	□□□□□ -0.18
ARFGAP1-223	ENST00000550188	ANTXR2	P58335	489 aa		13.95	□□□□□ -0.18
ARFGAP1-223	ENST00000550188	TMEM67	Q5HYA8	995 aa		13.95	□□□□□ -0.18
ARFGAP1-223	ENST00000550188	CHST3	Q7LGC8	479 aa		13.95	□□□□□ -0.18
ARFGAP1-223	ENST00000550188	ZNF467	Q7Z7K2	595 aa	Predicted RBP	13.95	□□□□□ -0.18
ARFGAP1-223	ENST00000550188	TRPV1	Q8NER1	839 aa		13.95	□□□□□ -0.18
ARFGAP1-223	ENST00000550188	A1CF	Q9NQ94	594 aa	Known RBP	13.95	□□□□□ -0.18
ARFGAP1-223	ENST00000550188	DDX20	Q9UHI6	824 aa	Known RBP	13.95	□□□□□ -0.18
ARFGAP1-223	ENST00000550188	OGDHL	Q9ULD0	1010 aa		13.95	□□□□□ -0.18
ARFGAP1-223	ENST00000550188	COL11A1	P12107	1806 aa	Predicted RBP	13.94	□□□□□ -0.18
ARFGAP1-223	ENST00000550188	SYNGAP1	Q96PV0	1343 aa		13.94	□□□□□ -0.18
ARFGAP1-223	ENST00000550188	BRCA2	P51587	3418 aa		13.94	□□□□□ -0.18
ARFGAP1-223	ENST00000550188	MCM5	P33992	734 aa		13.94	□□□□□ -0.18
ARFGAP1-223	ENST00000550188	LHX8	Q68G74	356 aa		13.94	□□□□□ -0.18
ARFGAP1-223	ENST00000550188	UBA5	Q9GZZ9	404 aa		13.94	□□□□□ -0.18
ARFGAP1-223	ENST00000550188	CNPY2	Q9Y2B0	182 aa		13.94	□□□□□ -0.18
ARFGAP1-223	ENST00000550188	DOCK3	Q8IZD9	2030 aa		13.93	□□□□□ -0.18
ARFGAP1-223	ENST00000550188	POTEB2	H3BUK9	544 aa		13.93	□□□□□ -0.18
ARFGAP1-223	ENST00000550188	SEPT4	O43236	478 aa		13.93	□□□□□ -0.18
ARFGAP1-223	ENST00000550188	PRC1	O43663	620 aa		13.93	□□□□□ -0.18
ARFGAP1-223	ENST00000550188	DHX16	O60231	1041 aa	Known RBP	13.93	□□□□□ -0.18
ARFGAP1-223	ENST00000550188	CDC37	Q16543	378 aa	Predicted RBP	13.93	□□□□□ -0.18
ARFGAP1-223	ENST00000550188	MUM1L1	Q5H9M0	696 aa		13.93	□□□□□ -0.18
ARFGAP1-223	ENST00000550188	MAMDC4	Q6UXC1	1216 aa		13.93	□□□□□ -0.18
ARFGAP1-223	ENST00000550188	CATIP	Q7Z7H3	387 aa		13.93	□□□□□ -0.18
ARFGAP1-223	ENST00000550188	ADGRF4	Q8IZF3	695 aa		13.93	□□□□□ -0.18
ARFGAP1-223	ENST00000550188	IGDCC4	Q8TDY8	1250 aa		13.93	□□□□□ -0.18
ARFGAP1-223	ENST00000550188	TMEM87B	Q96K49	555 aa		13.93	□□□□□ -0.18
ARFGAP1-223	ENST00000550188	HTATIP2	Q9BUP3	242 aa		13.93	□□□□□ -0.18
ARFGAP1-223	ENST00000550188	CPVL	Q9H3G5	476 aa		13.93	□□□□□ -0.18
ARFGAP1-223	ENST00000550188	CYP39A1	Q9NYL5	469 aa		13.93	□□□□□ -0.18
ARFGAP1-223	ENST00000550188	PALM3	A6NDB9	673 aa	Predicted RBP	13.92	□□□□□ -0.18
ARFGAP1-223	ENST00000550188	KLRF2	D3W0D1	207 aa		13.92	□□□□□ -0.18
ARFGAP1-223	ENST00000550188	REC8	O95072	547 aa		13.92	□□□□□ -0.18
ARFGAP1-223	ENST00000550188	TAL1	P17542	331 aa	Predicted RBP	13.92	□□□□□ -0.18
ARFGAP1-223	ENST00000550188	CNTN2	Q02246	1040 aa		13.92	□□□□□ -0.18
ARFGAP1-223	ENST00000550188	TROAP	Q12815	778 aa		13.92	□□□□□ -0.18
ARFGAP1-223	ENST00000550188	GRM4	Q14833	912 aa		13.92	□□□□□ -0.18
ARFGAP1-223	ENST00000550188	PRAMEF19	Q5SWL8	479 aa		13.92	□□□□□ -0.18
ARFGAP1-223	ENST00000550188	NSMF	Q6X4W1	530 aa		13.92	□□□□□ -0.18
ARFGAP1-223	ENST00000550188	NECAB2	Q7Z6G3	386 aa		13.92	□□□□□ -0.18
ARFGAP1-223	ENST00000550188	TMTC2	Q8N394	836 aa		13.92	□□□□□ -0.18
ARFGAP1-223	ENST00000550188	STAG2	Q8N3U4	1231 aa		13.92	□□□□□ -0.18
ARFGAP1-223	ENST00000550188	FAM133A	Q8N9E0	248 aa		13.92	□□□□□ -0.18
ARFGAP1-223	ENST00000550188	PAWR	Q96IZ0	340 aa	Known RBP	13.92	□□□□□ -0.18
ARFGAP1-223	ENST00000550188	LY9	Q9HBG7	655 aa		13.92	□□□□□ -0.18
ARFGAP1-223	ENST00000550188	SENP2	Q9HC62	589 aa		13.92	□□□□□ -0.18
ARFGAP1-223	ENST00000550188	MAD2L2	Q9UI95	211 aa		13.92	□□□□□ -0.18
ARFGAP1-223	ENST00000550188	NFIB	O00712	420 aa		13.91	□□□□□ -0.18
ARFGAP1-223	ENST00000550188	SH2B2	O14492	632 aa	Predicted RBP	13.91	□□□□□ -0.18
ARFGAP1-223	ENST00000550188	DDAH1	O94760	285 aa		13.91	□□□□□ -0.18
ARFGAP1-223	ENST00000550188	KRT32	Q14532	448 aa		13.91	□□□□□ -0.18
ARFGAP1-223	ENST00000550188	TSGA10IP	Q3SY00	556 aa		13.91	□□□□□ -0.18
ARFGAP1-223	ENST00000550188	USH1G	Q495M9	461 aa		13.91	□□□□□ -0.18
ARFGAP1-223	ENST00000550188	DIS3L	Q8TF46	1054 aa	Known RBP	13.91	□□□□□ -0.18
ARFGAP1-223	ENST00000550188	CLEC4D	Q8WXI8	215 aa		13.91	□□□□□ -0.18
ARFGAP1-223	ENST00000550188	FGD4	Q96M96	766 aa		13.91	□□□□□ -0.18

Retrieved 100 of 20,778 RNA–protein pairs in 138 ms