RNA–Protein interactions for RNA: ENST00000543988.1

OTUB1-212, Transcript of OTU deubiquitinase, ubiquitin aldehyde binding 1, humanhuman

TSL 1 (best) BASIC

Gene OTUB1, Length 1,259 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OTUB1-212ENST00000543988 MCM5P33992 734 aa25.48■■□□□ 1.67
OTUB1-212ENST00000543988 RGS19P49795 217 aa25.48■■□□□ 1.67
OTUB1-212ENST00000543988 MAP3K21Q5TCX8 1036 aa25.48■■□□□ 1.67
OTUB1-212ENST00000543988 PARP1P09874 1014 aaKnown RBP25.47■■□□□ 1.67
OTUB1-212ENST00000543988 EN2P19622 333 aaPredicted RBP25.47■■□□□ 1.67
OTUB1-212ENST00000543988 DHX30Q7L2E3 1194 aaKnown RBP eCLIP25.47■■□□□ 1.67
OTUB1-212ENST00000543988 CHST13Q8NET6 341 aa25.47■■□□□ 1.67
OTUB1-212ENST00000543988 UBA5Q9GZZ9 404 aa25.47■■□□□ 1.67
OTUB1-212ENST00000543988 LY9Q9HBG7 655 aa25.47■■□□□ 1.67
OTUB1-212ENST00000543988 RNF146Q9NTX7 359 aa25.47■■□□□ 1.67
OTUB1-212ENST00000543988 FBXO40Q9UH90 709 aa25.47■■□□□ 1.67
OTUB1-212ENST00000543988 CCPG1Q9ULG6 757 aa25.47■■□□□ 1.67
OTUB1-212ENST00000543988 BRCA2P51587 3418 aa25.46■■□□□ 1.67
OTUB1-212ENST00000543988 IGHA2P01877 340 aa25.46■■□□□ 1.67
OTUB1-212ENST00000543988 ICAM1P05362 532 aa25.46■■□□□ 1.67
OTUB1-212ENST00000543988 GJB1P08034 283 aa25.46■■□□□ 1.67
OTUB1-212ENST00000543988 XRN2Q9H0D6 950 aaKnown RBP eCLIP25.46■■□□□ 1.67
OTUB1-212ENST00000543988 PAK6Q9NQU5 681 aaPredicted RBP25.46■■□□□ 1.67
OTUB1-212ENST00000543988 SH2B2O14492 632 aaPredicted RBP25.45■■□□□ 1.66
OTUB1-212ENST00000543988 ALAS1P13196 640 aa25.45■■□□□ 1.66
OTUB1-212ENST00000543988 CACNB2Q08289 660 aaPredicted RBP25.45■■□□□ 1.66
OTUB1-212ENST00000543988 ADCK5Q3MIX3 580 aa25.45■■□□□ 1.66
OTUB1-212ENST00000543988 TSGA10IPQ3SY00 556 aa25.45■■□□□ 1.66
OTUB1-212ENST00000543988 MFSD14CQ5VZR4 134 aa25.45■■□□□ 1.66
OTUB1-212ENST00000543988 OLFML2BQ68BL8 750 aa25.45■■□□□ 1.66
OTUB1-212ENST00000543988 STAG2Q8N3U4 1231 aa25.45■■□□□ 1.66
OTUB1-212ENST00000543988 KCNB2Q92953 911 aa25.45■■□□□ 1.66
OTUB1-212ENST00000543988 SHISA4Q96DD7 197 aa25.45■■□□□ 1.66
OTUB1-212ENST00000543988 MTA3Q9BTC8 594 aa25.45■■□□□ 1.66
OTUB1-212ENST00000543988 ACAD9Q9H845 621 aa25.45■■□□□ 1.66
OTUB1-212ENST00000543988 SLC5A4Q9NY91 659 aa25.45■■□□□ 1.66
OTUB1-212ENST00000543988 RBBP6Q7Z6E9 1792 aaKnown RBP25.45■■□□□ 1.66
OTUB1-212ENST00000543988 CYP2C19P33261 490 aa25.44■■□□□ 1.66
OTUB1-212ENST00000543988 HSPA4P34932 840 aa25.44■■□□□ 1.66
OTUB1-212ENST00000543988 GRM4Q14833 912 aa25.44■■□□□ 1.66
OTUB1-212ENST00000543988 ZNF792Q3KQV3 632 aa25.44■■□□□ 1.66
OTUB1-212ENST00000543988 TKFCQ3LXA3 575 aa25.44■■□□□ 1.66
OTUB1-212ENST00000543988 MAML3Q96JK9 1138 aa25.44■■□□□ 1.66
OTUB1-212ENST00000543988 TMEM87BQ96K49 555 aa25.44■■□□□ 1.66
OTUB1-212ENST00000543988 TRERF1Q96PN7 1200 aa25.44■■□□□ 1.66
OTUB1-212ENST00000543988 NEK1Q96PY6 1258 aa25.44■■□□□ 1.66
OTUB1-212ENST00000543988 LRRC2Q9BYS8 371 aa25.44■■□□□ 1.66
OTUB1-212ENST00000543988 RPTORQ8N122 1335 aa25.43■■□□□ 1.66
OTUB1-212ENST00000543988 DNAJC25-GNG10A0A024R161 153 aa25.43■■□□□ 1.66
OTUB1-212ENST00000543988 TROAPQ12815 778 aa25.43■■□□□ 1.66
OTUB1-212ENST00000543988 KRT32Q14532 448 aa25.43■■□□□ 1.66
OTUB1-212ENST00000543988 MUM1L1Q5H9M0 696 aa25.43■■□□□ 1.66
OTUB1-212ENST00000543988 CATIPQ7Z7H3 387 aa25.43■■□□□ 1.66
OTUB1-212ENST00000543988 ADGRF4Q8IZF3 695 aa25.43■■□□□ 1.66
OTUB1-212ENST00000543988 DEFB118Q96PH6 123 aa25.43■■□□□ 1.66
OTUB1-212ENST00000543988 HMX1Q9NP08 348 aaPredicted RBP25.43■■□□□ 1.66
OTUB1-212ENST00000543988 MAD2L2Q9UI95 211 aa25.43■■□□□ 1.66
OTUB1-212ENST00000543988 GJA8P48165 433 aa25.42■■□□□ 1.66
OTUB1-212ENST00000543988 ANKRD35Q8N283 1001 aa25.42■■□□□ 1.66
OTUB1-212ENST00000543988 U2AF1L4Q8WU68 220 aaKnown RBP25.42■■□□□ 1.66
OTUB1-212ENST00000543988 DDX11Q96FC9 970 aa25.42■■□□□ 1.66
OTUB1-212ENST00000543988 A1CFQ9NQ94 594 aaKnown RBP25.42■■□□□ 1.66
OTUB1-212ENST00000543988 WDR19Q8NEZ3 1342 aa25.41■■□□□ 1.66
OTUB1-212ENST00000543988 PALM3A6NDB9 673 aaPredicted RBP25.41■■□□□ 1.66
OTUB1-212ENST00000543988 KLRF2D3W0D1 207 aa25.41■■□□□ 1.66
OTUB1-212ENST00000543988 CCND3P30281 292 aaPredicted RBP25.41■■□□□ 1.66
OTUB1-212ENST00000543988 CDC37Q16543 378 aaPredicted RBP25.41■■□□□ 1.66
OTUB1-212ENST00000543988 ZNF654Q8IZM8 581 aa25.41■■□□□ 1.66
OTUB1-212ENST00000543988 TCEANC2Q96MN5 208 aa25.41■■□□□ 1.66
OTUB1-212ENST00000543988 MYL10Q9BUA6 226 aa25.41■■□□□ 1.66
OTUB1-212ENST00000543988 JMJD4Q9H9V9 463 aa25.41■■□□□ 1.66
OTUB1-212ENST00000543988 DIS3Q9Y2L1 958 aaKnown RBP25.41■■□□□ 1.66
OTUB1-212ENST00000543988 SNX14Q9Y5W7 946 aa25.41■■□□□ 1.66
OTUB1-212ENST00000543988 DHX16O60231 1041 aaKnown RBP25.4■■□□□ 1.66
OTUB1-212ENST00000543988 DDAH1O94760 285 aa25.4■■□□□ 1.66
OTUB1-212ENST00000543988 SLC35G1Q2M3R5 365 aa25.4■■□□□ 1.66
OTUB1-212ENST00000543988 NFXL1Q6ZNB6 911 aa25.4■■□□□ 1.66
OTUB1-212ENST00000543988 TRPV1Q8NER1 839 aa25.4■■□□□ 1.66
OTUB1-212ENST00000543988 LIFRP42702 1097 aa25.39■■□□□ 1.66
OTUB1-212ENST00000543988 EXOSC10Q01780 885 aaKnown RBP25.39■■□□□ 1.66
OTUB1-212ENST00000543988 DHX32Q7L7V1 743 aaKnown RBP25.39■■□□□ 1.66
OTUB1-212ENST00000543988 NUP133Q8WUM0 1156 aa25.39■■□□□ 1.66
OTUB1-212ENST00000543988 FGD4Q96M96 766 aa25.39■■□□□ 1.66
OTUB1-212ENST00000543988 JAKMIP1Q96N16 626 aaKnown RBP25.39■■□□□ 1.66
OTUB1-212ENST00000543988 VAT1LQ9HCJ6 419 aa25.39■■□□□ 1.66
OTUB1-212ENST00000543988 PNMA2Q9UL42 364 aa25.39■■□□□ 1.66
OTUB1-212ENST00000543988 CCDC69A6NI79 296 aa25.38■■□□□ 1.65
OTUB1-212ENST00000543988 NFIBO00712 420 aa25.38■■□□□ 1.65
OTUB1-212ENST00000543988 EPB41L2O43491 1005 aaKnown RBP25.38■■□□□ 1.65
OTUB1-212ENST00000543988 SGPL1O95470 568 aa25.38■■□□□ 1.65
OTUB1-212ENST00000543988 CYBAP13498 195 aa25.38■■□□□ 1.65
OTUB1-212ENST00000543988 MLLT1Q03111 559 aaPredicted RBP25.38■■□□□ 1.65
OTUB1-212ENST00000543988 QRICH1Q2TAL8 776 aa25.38■■□□□ 1.65
OTUB1-212ENST00000543988 CLEC4DQ8WXI8 215 aa25.38■■□□□ 1.65
OTUB1-212ENST00000543988 TINF2Q9BSI4 451 aa25.38■■□□□ 1.65
OTUB1-212ENST00000543988 USP26Q9BXU7 913 aa25.38■■□□□ 1.65
OTUB1-212ENST00000543988 CRISPLD2Q9H0B8 497 aa25.38■■□□□ 1.65
OTUB1-212ENST00000543988 PFASO15067 1338 aa25.37■■□□□ 1.65
OTUB1-212ENST00000543988 POTEB2H3BUK9 544 aa25.37■■□□□ 1.65
OTUB1-212ENST00000543988 CPA1P15085 419 aa25.37■■□□□ 1.65
OTUB1-212ENST00000543988 CNTN2Q02246 1040 aa25.37■■□□□ 1.65
OTUB1-212ENST00000543988 USH1GQ495M9 461 aa25.37■■□□□ 1.65
OTUB1-212ENST00000543988 NSMFQ6X4W1 530 aa25.37■■□□□ 1.65
OTUB1-212ENST00000543988 TMTC2Q8N394 836 aa25.37■■□□□ 1.65
OTUB1-212ENST00000543988 CYP39A1Q9NYL5 469 aa25.37■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms