RNA–Protein interactions for RNA: ENST00000543933.5

C1RL-208, Transcript of complement C1r subcomponent like, humanhuman

TSL 5

Gene C1RL, Length 592 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C1RL-208ENST00000543933 SYNGAP1Q96PV0 1343 aa13.49□□□□□ -0.25
C1RL-208ENST00000543933 SYNRGQ9UMZ2 1314 aa13.49□□□□□ -0.25
C1RL-208ENST00000543933 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.49□□□□□ -0.25
C1RL-208ENST00000543933 TSPY2A6NKD2 308 aa13.49□□□□□ -0.25
C1RL-208ENST00000543933 KBTBD13C9JR72 458 aa13.49□□□□□ -0.25
C1RL-208ENST00000543933 EPHB4P54760 987 aa13.49□□□□□ -0.25
C1RL-208ENST00000543933 HAND2P61296 217 aa13.49□□□□□ -0.25
C1RL-208ENST00000543933 TLE2Q04725 743 aa13.49□□□□□ -0.25
C1RL-208ENST00000543933 LRRFIP1Q32MZ4 808 aaKnown RBP13.49□□□□□ -0.25
C1RL-208ENST00000543933 MCMDC2Q4G0Z9 681 aa13.49□□□□□ -0.25
C1RL-208ENST00000543933 C1orf53Q5VUE5 145 aa13.49□□□□□ -0.25
C1RL-208ENST00000543933 TBC1D10CQ8IV04 446 aa13.49□□□□□ -0.25
C1RL-208ENST00000543933 BADQ92934 168 aa13.49□□□□□ -0.25
C1RL-208ENST00000543933 DDX11Q96FC9 970 aa13.49□□□□□ -0.25
C1RL-208ENST00000543933 ZNF287Q9HBT7 754 aa13.49□□□□□ -0.25
C1RL-208ENST00000543933 A1CFQ9NQ94 594 aaKnown RBP13.49□□□□□ -0.25
C1RL-208ENST00000543933 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.49□□□□□ -0.25
C1RL-208ENST00000543933 PRR12Q9ULL5 1215 aa13.49□□□□□ -0.25
C1RL-208ENST00000543933 STX8Q9UNK0 236 aa13.49□□□□□ -0.25
C1RL-208ENST00000543933 MTMR7Q9Y216 660 aa13.49□□□□□ -0.25
C1RL-208ENST00000543933 A0A1W2PQ45 241 aaPredicted RBP13.48□□□□□ -0.25
C1RL-208ENST00000543933 A0A1W2PQY0 241 aa13.48□□□□□ -0.25
C1RL-208ENST00000543933 RANBP6O60518 1105 aaKnown RBP13.48□□□□□ -0.25
C1RL-208ENST00000543933 PLA2G6O60733 806 aa13.48□□□□□ -0.25
C1RL-208ENST00000543933 RARBP10826 455 aa13.48□□□□□ -0.25
C1RL-208ENST00000543933 AKR1A1P14550 325 aa13.48□□□□□ -0.25
C1RL-208ENST00000543933 COPB2P35606 906 aa13.48□□□□□ -0.25
C1RL-208ENST00000543933 SLC16A2P36021 539 aa13.48□□□□□ -0.25
C1RL-208ENST00000543933 SLC1A4P43007 532 aa13.48□□□□□ -0.25
C1RL-208ENST00000543933 OAZ1P54368 228 aa13.48□□□□□ -0.25
C1RL-208ENST00000543933 NUCB1Q02818 461 aa13.48□□□□□ -0.25
C1RL-208ENST00000543933 ACVR2BQ13705 512 aa13.48□□□□□ -0.25
C1RL-208ENST00000543933 SHHQ15465 462 aa13.48□□□□□ -0.25
C1RL-208ENST00000543933 ARMCX2Q7L311 632 aa13.48□□□□□ -0.25
C1RL-208ENST00000543933 ZNF467Q7Z7K2 595 aaPredicted RBP13.48□□□□□ -0.25
C1RL-208ENST00000543933 CCDC144CPQ8IYA2 1237 aa13.48□□□□□ -0.25
C1RL-208ENST00000543933 CHST13Q8NET6 341 aa13.48□□□□□ -0.25
C1RL-208ENST00000543933 TMEM47Q9BQJ4 181 aa13.48□□□□□ -0.25
C1RL-208ENST00000543933 OSBPL3Q9H4L5 887 aa13.48□□□□□ -0.25
C1RL-208ENST00000543933 COL6A3P12111 3177 aa13.47□□□□□ -0.25
C1RL-208ENST00000543933 POTEB2H3BUK9 544 aa13.47□□□□□ -0.25
C1RL-208ENST00000543933 SDSP20132 328 aa13.47□□□□□ -0.25
C1RL-208ENST00000543933 PDE4AP27815 886 aa13.47□□□□□ -0.25
C1RL-208ENST00000543933 STAT2P52630 851 aa13.47□□□□□ -0.25
C1RL-208ENST00000543933 KCNA10Q16322 511 aa13.47□□□□□ -0.25
C1RL-208ENST00000543933 CCDC144BQ3MJ40 725 aa13.47□□□□□ -0.25
C1RL-208ENST00000543933 CCDC174Q6PII3 467 aa13.47□□□□□ -0.25
C1RL-208ENST00000543933 CHD1LQ86WJ1 897 aa13.47□□□□□ -0.25
C1RL-208ENST00000543933 ANKRD35Q8N283 1001 aa13.47□□□□□ -0.25
C1RL-208ENST00000543933 MSL3Q8N5Y2 521 aaKnown RBP13.47□□□□□ -0.25
C1RL-208ENST00000543933 RILPL2Q969X0 211 aa13.47□□□□□ -0.25
C1RL-208ENST00000543933 PDGFCQ9NRA1 345 aa13.47□□□□□ -0.25
C1RL-208ENST00000543933 RNF146Q9NTX7 359 aa13.47□□□□□ -0.25
C1RL-208ENST00000543933 MTMR10Q9NXD2 777 aa13.47□□□□□ -0.25
C1RL-208ENST00000543933 ZHX1Q9UKY1 873 aaPredicted RBP13.47□□□□□ -0.25
C1RL-208ENST00000543933 LAMA4Q16363 1823 aa13.46□□□□□ -0.25
C1RL-208ENST00000543933 NEDD4P46934 1319 aa13.46□□□□□ -0.25
C1RL-208ENST00000543933 FRMPD2Q68DX3 1309 aaPredicted RBP13.46□□□□□ -0.25
C1RL-208ENST00000543933 CCDC171Q6TFL3 1326 aa13.46□□□□□ -0.25
C1RL-208ENST00000543933 TRIM6-TRIM34B2RNG4 842 aa13.46□□□□□ -0.25
C1RL-208ENST00000543933 SLC3A2P08195 630 aaKnown RBP13.46□□□□□ -0.25
C1RL-208ENST00000543933 ALAS1P13196 640 aa13.46□□□□□ -0.25
C1RL-208ENST00000543933 ACLYP53396 1101 aa13.46□□□□□ -0.25
C1RL-208ENST00000543933 FAAP100Q0VG06 881 aa13.46□□□□□ -0.25
C1RL-208ENST00000543933 RRP12Q5JTH9 1297 aaKnown RBP13.46□□□□□ -0.25
C1RL-208ENST00000543933 BTNL9Q6UXG8 535 aa13.46□□□□□ -0.25
C1RL-208ENST00000543933 FAM160B2Q86V87 743 aa13.46□□□□□ -0.25
C1RL-208ENST00000543933 DEFB123Q8N688 67 aa13.46□□□□□ -0.25
C1RL-208ENST00000543933 CHURC1Q8WUH1 139 aa13.46□□□□□ -0.25
C1RL-208ENST00000543933 TRERF1Q96PN7 1200 aa13.46□□□□□ -0.25
C1RL-208ENST00000543933 UPF3AQ9H1J1 476 aaKnown RBP13.46□□□□□ -0.25
C1RL-208ENST00000543933 CPVLQ9H3G5 476 aa13.46□□□□□ -0.25
C1RL-208ENST00000543933 PRDM5Q9NQX1 630 aaPredicted RBP13.46□□□□□ -0.25
C1RL-208ENST00000543933 TCP11L1Q9NUJ3 509 aa13.46□□□□□ -0.25
C1RL-208ENST00000543933 FAM184BQ9ULE4 1060 aa13.46□□□□□ -0.25
C1RL-208ENST00000543933 CNPY2Q9Y2B0 182 aa13.46□□□□□ -0.25
C1RL-208ENST00000543933 ZMYM6O95789 1325 aa13.45□□□□□ -0.26
C1RL-208ENST00000543933 LAMA2P24043 3122 aaKnown RBP13.45□□□□□ -0.26
C1RL-208ENST00000543933 RBAK-RBAKDNI3L0D1 243 aa13.45□□□□□ -0.26
C1RL-208ENST00000543933 DUSP11O75319 330 aaKnown RBP13.45□□□□□ -0.26
C1RL-208ENST00000543933 CDK7P50613 346 aa13.45□□□□□ -0.26
C1RL-208ENST00000543933 GPR153Q6NV75 609 aa13.45□□□□□ -0.26
C1RL-208ENST00000543933 TAPT1Q6NXT6 567 aa13.45□□□□□ -0.26
C1RL-208ENST00000543933 ZKSCAN3Q9BRR0 538 aa13.45□□□□□ -0.26
C1RL-208ENST00000543933 RANBP17Q9H2T7 1088 aaKnown RBP13.45□□□□□ -0.26
C1RL-208ENST00000543933 ACAD9Q9H845 621 aa13.45□□□□□ -0.26
C1RL-208ENST00000543933 GPCPD1Q9NPB8 672 aa13.45□□□□□ -0.26
C1RL-208ENST00000543933 NFIBO00712 420 aa13.44□□□□□ -0.26
C1RL-208ENST00000543933 SNHG28P0DPA3 235 aa13.44□□□□□ -0.26
C1RL-208ENST00000543933 FDX1P10109 184 aa13.44□□□□□ -0.26
C1RL-208ENST00000543933 PDHBP11177 359 aa13.44□□□□□ -0.26
C1RL-208ENST00000543933 CST5P28325 142 aaPredicted RBP13.44□□□□□ -0.26
C1RL-208ENST00000543933 GJA9P57773 515 aa13.44□□□□□ -0.26
C1RL-208ENST00000543933 NKX3-2P78367 333 aa13.44□□□□□ -0.26
C1RL-208ENST00000543933 BEX3Q00994 111 aa13.44□□□□□ -0.26
C1RL-208ENST00000543933 AKNAD1Q5T1N1 836 aa13.44□□□□□ -0.26
C1RL-208ENST00000543933 RNF180Q86T96 592 aa13.44□□□□□ -0.26
C1RL-208ENST00000543933 CLEC4DQ8WXI8 215 aa13.44□□□□□ -0.26
C1RL-208ENST00000543933 GUCD1Q96NT3 240 aa13.44□□□□□ -0.26
C1RL-208ENST00000543933 TSEN34Q9BSV6 310 aaKnown RBP13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms