RNA–Protein interactions for RNA: ENST00000540904.1

SNHG1-215, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5

Gene SNHG1, Length 594 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-215ENST00000540904 UBA5Q9GZZ9 404 aa10.8□□□□□ -0.68
SNHG1-215ENST00000540904 SLC5A4Q9NY91 659 aa10.8□□□□□ -0.68
SNHG1-215ENST00000540904 FLRT1Q9NZU1 646 aa10.8□□□□□ -0.68
SNHG1-215ENST00000540904 ZNF536O15090 1300 aa10.8□□□□□ -0.68
SNHG1-215ENST00000540904 PRC1O43663 620 aa10.79□□□□□ -0.68
SNHG1-215ENST00000540904 REC8O95072 547 aa10.79□□□□□ -0.68
SNHG1-215ENST00000540904 PGK2P07205 417 aa10.79□□□□□ -0.68
SNHG1-215ENST00000540904 PARP1P09874 1014 aaKnown RBP10.79□□□□□ -0.68
SNHG1-215ENST00000540904 ALAS1P13196 640 aa10.79□□□□□ -0.68
SNHG1-215ENST00000540904 PRKAR2AP13861 404 aaKnown RBP10.79□□□□□ -0.68
SNHG1-215ENST00000540904 MCM5P33992 734 aa10.79□□□□□ -0.68
SNHG1-215ENST00000540904 COL9A3Q14050 684 aaPredicted RBP10.79□□□□□ -0.68
SNHG1-215ENST00000540904 ASPRV1Q53RT3 343 aa10.79□□□□□ -0.68
SNHG1-215ENST00000540904 MFSD14CQ5VZR4 134 aa10.79□□□□□ -0.68
SNHG1-215ENST00000540904 ANKRD35Q8N283 1001 aa10.79□□□□□ -0.68
SNHG1-215ENST00000540904 IGDCC4Q8TDY8 1250 aa10.79□□□□□ -0.68
SNHG1-215ENST00000540904 DDX11Q96FC9 970 aa10.79□□□□□ -0.68
SNHG1-215ENST00000540904 RANBP17Q9H2T7 1088 aaKnown RBP10.79□□□□□ -0.68
SNHG1-215ENST00000540904 CPVLQ9H3G5 476 aa10.79□□□□□ -0.68
SNHG1-215ENST00000540904 SENP2Q9HC62 589 aa10.79□□□□□ -0.68
SNHG1-215ENST00000540904 HMX1Q9NP08 348 aaPredicted RBP10.79□□□□□ -0.68
SNHG1-215ENST00000540904 CCPG1Q9ULG6 757 aa10.79□□□□□ -0.68
SNHG1-215ENST00000540904 CENPFP49454 3210 aa10.78□□□□□ -0.68
SNHG1-215ENST00000540904 ICAM1P05362 532 aa10.78□□□□□ -0.68
SNHG1-215ENST00000540904 GJB1P08034 283 aa10.78□□□□□ -0.68
SNHG1-215ENST00000540904 TAL1P17542 331 aaPredicted RBP10.78□□□□□ -0.68
SNHG1-215ENST00000540904 CYP2C19P33261 490 aa10.78□□□□□ -0.68
SNHG1-215ENST00000540904 RGS19P49795 217 aa10.78□□□□□ -0.68
SNHG1-215ENST00000540904 CACNB2Q08289 660 aaPredicted RBP10.78□□□□□ -0.68
SNHG1-215ENST00000540904 NFXL1Q6ZNB6 911 aa10.78□□□□□ -0.68
SNHG1-215ENST00000540904 CATIPQ7Z7H3 387 aa10.78□□□□□ -0.68
SNHG1-215ENST00000540904 RASEFQ8IZ41 740 aa10.78□□□□□ -0.68
SNHG1-215ENST00000540904 CHST13Q8NET6 341 aa10.78□□□□□ -0.68
SNHG1-215ENST00000540904 DEFB118Q96PH6 123 aa10.78□□□□□ -0.68
SNHG1-215ENST00000540904 TRERF1Q96PN7 1200 aa10.78□□□□□ -0.68
SNHG1-215ENST00000540904 XRN2Q9H0D6 950 aaKnown RBP eCLIP10.78□□□□□ -0.681e-6■□□□□ 8.4
SNHG1-215ENST00000540904 LY9Q9HBG7 655 aa10.78□□□□□ -0.68
SNHG1-215ENST00000540904 GPHNQ9NQX3 736 aaPredicted RBP10.78□□□□□ -0.68
SNHG1-215ENST00000540904 RNF146Q9NTX7 359 aa10.78□□□□□ -0.68
SNHG1-215ENST00000540904 FBXO40Q9UH90 709 aa10.78□□□□□ -0.68
SNHG1-215ENST00000540904 PARP14Q460N5 1801 aa10.78□□□□□ -0.68
SNHG1-215ENST00000540904 RPTORQ8N122 1335 aa10.78□□□□□ -0.68
SNHG1-215ENST00000540904 DOCK3Q8IZD9 2030 aa10.77□□□□□ -0.68
SNHG1-215ENST00000540904 PLXNB2O15031 1838 aa10.77□□□□□ -0.68
SNHG1-215ENST00000540904 KLRF2D3W0D1 207 aa10.77□□□□□ -0.69
SNHG1-215ENST00000540904 DHX16O60231 1041 aaKnown RBP10.77□□□□□ -0.69
SNHG1-215ENST00000540904 GJA8P48165 433 aa10.77□□□□□ -0.69
SNHG1-215ENST00000540904 MLLT1Q03111 559 aaPredicted RBP10.77□□□□□ -0.69
SNHG1-215ENST00000540904 KRT32Q14532 448 aa10.77□□□□□ -0.69
SNHG1-215ENST00000540904 TKFCQ3LXA3 575 aa10.77□□□□□ -0.69
SNHG1-215ENST00000540904 ADCK5Q3MIX3 580 aa10.77□□□□□ -0.69
SNHG1-215ENST00000540904 MAP3K21Q5TCX8 1036 aa10.77□□□□□ -0.69
SNHG1-215ENST00000540904 OLFML2BQ68BL8 750 aa10.77□□□□□ -0.69
SNHG1-215ENST00000540904 ADGRF4Q8IZF3 695 aa10.77□□□□□ -0.69
SNHG1-215ENST00000540904 STAG2Q8N3U4 1231 aa10.77□□□□□ -0.69
SNHG1-215ENST00000540904 U2AF1L4Q8WU68 220 aaKnown RBP10.77□□□□□ -0.69
SNHG1-215ENST00000540904 MAML3Q96JK9 1138 aa10.77□□□□□ -0.69
SNHG1-215ENST00000540904 TMEM87BQ96K49 555 aa10.77□□□□□ -0.69
SNHG1-215ENST00000540904 NEK1Q96PY6 1258 aa10.77□□□□□ -0.69
SNHG1-215ENST00000540904 MTA3Q9BTC8 594 aa10.77□□□□□ -0.69
SNHG1-215ENST00000540904 LRRC2Q9BYS8 371 aa10.77□□□□□ -0.69
SNHG1-215ENST00000540904 ACAD9Q9H845 621 aa10.77□□□□□ -0.69
SNHG1-215ENST00000540904 VAT1LQ9HCJ6 419 aa10.77□□□□□ -0.69
SNHG1-215ENST00000540904 PAK6Q9NQU5 681 aaPredicted RBP10.77□□□□□ -0.69
SNHG1-215ENST00000540904 DNAJC25-GNG10A0A024R161 153 aa10.76□□□□□ -0.69
SNHG1-215ENST00000540904 CCDC69A6NI79 296 aa10.76□□□□□ -0.69
SNHG1-215ENST00000540904 SH2B2O14492 632 aaPredicted RBP10.76□□□□□ -0.69
SNHG1-215ENST00000540904 SGPL1O95470 568 aa10.76□□□□□ -0.69
SNHG1-215ENST00000540904 TFRCP02786 760 aaKnown RBP10.76□□□□□ -0.69
SNHG1-215ENST00000540904 CNGA1P29973 690 aa10.76□□□□□ -0.69
SNHG1-215ENST00000540904 CCND3P30281 292 aaPredicted RBP10.76□□□□□ -0.69
SNHG1-215ENST00000540904 HSPA4P34932 840 aa10.76□□□□□ -0.69
SNHG1-215ENST00000540904 TROAPQ12815 778 aa10.76□□□□□ -0.69
SNHG1-215ENST00000540904 CDC37Q16543 378 aaPredicted RBP10.76□□□□□ -0.69
SNHG1-215ENST00000540904 ZNF792Q3KQV3 632 aa10.76□□□□□ -0.69
SNHG1-215ENST00000540904 TSGA10IPQ3SY00 556 aa10.76□□□□□ -0.69
SNHG1-215ENST00000540904 MUM1L1Q5H9M0 696 aa10.76□□□□□ -0.69
SNHG1-215ENST00000540904 TMTC2Q8N394 836 aa10.76□□□□□ -0.69
SNHG1-215ENST00000540904 NUP133Q8WUM0 1156 aa10.76□□□□□ -0.69
SNHG1-215ENST00000540904 SHISA4Q96DD7 197 aa10.76□□□□□ -0.69
SNHG1-215ENST00000540904 MYL10Q9BUA6 226 aa10.76□□□□□ -0.69
SNHG1-215ENST00000540904 A1CFQ9NQ94 594 aaKnown RBP10.76□□□□□ -0.69
SNHG1-215ENST00000540904 MAD2L2Q9UI95 211 aa10.76□□□□□ -0.69
SNHG1-215ENST00000540904 COL11A1P12107 1806 aaPredicted RBP10.76□□□□□ -0.69
SNHG1-215ENST00000540904 PALM3A6NDB9 673 aaPredicted RBP10.75□□□□□ -0.69
SNHG1-215ENST00000540904 POTEB2H3BUK9 544 aa10.75□□□□□ -0.69
SNHG1-215ENST00000540904 IGHA2P01877 340 aa10.75□□□□□ -0.69
SNHG1-215ENST00000540904 CNTN2Q02246 1040 aa10.75□□□□□ -0.69
SNHG1-215ENST00000540904 GRM4Q14833 912 aa10.75□□□□□ -0.69
SNHG1-215ENST00000540904 USH1GQ495M9 461 aa10.75□□□□□ -0.69
SNHG1-215ENST00000540904 PRAMEF19Q5SWL8 479 aa10.75□□□□□ -0.69
SNHG1-215ENST00000540904 NSMFQ6X4W1 530 aa10.75□□□□□ -0.69
SNHG1-215ENST00000540904 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.75□□□□□ -0.69
SNHG1-215ENST00000540904 DHX32Q7L7V1 743 aaKnown RBP10.75□□□□□ -0.69
SNHG1-215ENST00000540904 ZNF654Q8IZM8 581 aa10.75□□□□□ -0.69
SNHG1-215ENST00000540904 TCEANC2Q96MN5 208 aa10.75□□□□□ -0.69
SNHG1-215ENST00000540904 JMJD4Q9H9V9 463 aa10.75□□□□□ -0.69
SNHG1-215ENST00000540904 PNMA2Q9UL42 364 aa10.75□□□□□ -0.69
SNHG1-215ENST00000540904 DIS3Q9Y2L1 958 aaKnown RBP10.75□□□□□ -0.69
SNHG1-215ENST00000540904 SNX14Q9Y5W7 946 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms