RNA–Protein interactions for RNA: ENST00000537824.2

CSMD1-215, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 13,512 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-215ENST00000537824 MSANTD4Q8NCY6 345 aa6.19□□□□□ -1.42
CSMD1-215ENST00000537824 TRAF3IP3Q9Y228 551 aa6.19□□□□□ -1.42
CSMD1-215ENST00000537824 MED13LQ71F56 2210 aa6.19□□□□□ -1.42
CSMD1-215ENST00000537824 CDK13Q14004 1512 aaKnown RBP6.19□□□□□ -1.42
CSMD1-215ENST00000537824 CORO7P57737 925 aa6.19□□□□□ -1.42
CSMD1-215ENST00000537824 PFKFB1P16118 471 aa6.19□□□□□ -1.42
CSMD1-215ENST00000537824 GNAQP50148 359 aa6.19□□□□□ -1.42
CSMD1-215ENST00000537824 PTPN21Q16825 1174 aa6.19□□□□□ -1.42
CSMD1-215ENST00000537824 IMPG2Q9BZV3 1241 aa6.19□□□□□ -1.42
CSMD1-215ENST00000537824 TBC1D23Q9NUY8 699 aa6.19□□□□□ -1.42
CSMD1-215ENST00000537824 PLAAQ9Y263 795 aa6.19□□□□□ -1.42
CSMD1-215ENST00000537824 SOS1Q07889 1333 aaPredicted RBP6.19□□□□□ -1.42
CSMD1-215ENST00000537824 GAPVD1Q14C86 1478 aa6.19□□□□□ -1.42
CSMD1-215ENST00000537824 ZSCAN20P17040 1043 aaPredicted RBP6.19□□□□□ -1.42
CSMD1-215ENST00000537824 RPL13P26373 211 aaKnown RBP6.19□□□□□ -1.42
CSMD1-215ENST00000537824 LAMB3Q13751 1172 aa6.19□□□□□ -1.42
CSMD1-215ENST00000537824 TTC38Q5R3I4 469 aa6.19□□□□□ -1.42
CSMD1-215ENST00000537824 GSPT2Q8IYD1 628 aaKnown RBP6.19□□□□□ -1.42
CSMD1-215ENST00000537824 ABCA7Q8IZY2 2146 aa6.19□□□□□ -1.42
CSMD1-215ENST00000537824 OGFOD1Q8N543 542 aa6.19□□□□□ -1.42
CSMD1-215ENST00000537824 UBAP1Q9NZ09 502 aa6.19□□□□□ -1.42
CSMD1-215ENST00000537824 TMEM232C9JQI7 657 aa6.19□□□□□ -1.42
CSMD1-215ENST00000537824 NOP14P78316 857 aaKnown RBP6.19□□□□□ -1.42
CSMD1-215ENST00000537824 SESTD1Q86VW0 696 aa6.19□□□□□ -1.42
CSMD1-215ENST00000537824 IQCDQ96DY2 449 aa6.19□□□□□ -1.42
CSMD1-215ENST00000537824 USP28Q96RU2 1077 aa6.19□□□□□ -1.42
CSMD1-215ENST00000537824 OSBPL9Q96SU4 736 aa6.19□□□□□ -1.42
CSMD1-215ENST00000537824 MPHOSPH6Q99547 160 aaKnown RBP6.19□□□□□ -1.42
CSMD1-215ENST00000537824 NLRC4Q9NPP4 1024 aa6.19□□□□□ -1.42
CSMD1-215ENST00000537824 KRT3P12035 628 aa6.19□□□□□ -1.42
CSMD1-215ENST00000537824 CYP2C19P33261 490 aa6.19□□□□□ -1.42
CSMD1-215ENST00000537824 DDIT3P35638 169 aa6.19□□□□□ -1.42
CSMD1-215ENST00000537824 TRPC1P48995 793 aa6.19□□□□□ -1.42
CSMD1-215ENST00000537824 HAUS7Q99871 368 aa6.19□□□□□ -1.42
CSMD1-215ENST00000537824 EFHD1Q9BUP0 239 aa6.19□□□□□ -1.42
CSMD1-215ENST00000537824 NOVA2Q9UNW9 492 aaKnown RBP6.19□□□□□ -1.42
CSMD1-215ENST00000537824 ARIH1Q9Y4X5 557 aaPredicted RBP6.19□□□□□ -1.42
CSMD1-215ENST00000537824 MDC1Q14676 2089 aaKnown RBP6.18□□□□□ -1.42
CSMD1-215ENST00000537824 CADP27708 2225 aa6.18□□□□□ -1.42
CSMD1-215ENST00000537824 BUB1O43683 1085 aa6.18□□□□□ -1.42
CSMD1-215ENST00000537824 SERPINB3P29508 390 aa6.18□□□□□ -1.42
CSMD1-215ENST00000537824 RBM6P78332 1123 aaKnown RBP6.18□□□□□ -1.42
CSMD1-215ENST00000537824 PROCA1Q8NCQ7 364 aaPredicted RBP6.18□□□□□ -1.42
CSMD1-215ENST00000537824 DONSONQ9NYP3 566 aa6.18□□□□□ -1.42
CSMD1-215ENST00000537824 TRIOBPQ9H2D6 2365 aa6.18□□□□□ -1.42
CSMD1-215ENST00000537824 IL17RAQ96F46 866 aa6.18□□□□□ -1.42
CSMD1-215ENST00000537824 NDE1Q9NXR1 346 aa6.18□□□□□ -1.42
CSMD1-215ENST00000537824 MYO1AQ9UBC5 1043 aa6.18□□□□□ -1.42
CSMD1-215ENST00000537824 TMA7Q9Y2S6 64 aaKnown RBP6.18□□□□□ -1.42
CSMD1-215ENST00000537824 SNX14Q9Y5W7 946 aa6.18□□□□□ -1.42
CSMD1-215ENST00000537824 BLZF1Q9H2G9 400 aa6.18□□□□□ -1.42
CSMD1-215ENST00000537824 BAG5Q9UL15 447 aa6.18□□□□□ -1.42
CSMD1-215ENST00000537824 BLMP54132 1417 aaPredicted RBP6.18□□□□□ -1.42
CSMD1-215ENST00000537824 GNAT1P11488 350 aa6.18□□□□□ -1.42
CSMD1-215ENST00000537824 DAB2P98082 770 aa6.18□□□□□ -1.42
CSMD1-215ENST00000537824 FLCNQ8NFG4 579 aa6.18□□□□□ -1.42
CSMD1-215ENST00000537824 TUBB6Q9BUF5 446 aa6.18□□□□□ -1.42
CSMD1-215ENST00000537824 SPC25Q9HBM1 224 aa6.18□□□□□ -1.42
CSMD1-215ENST00000537824 ARHGAP10A1A4S6 786 aa6.18□□□□□ -1.42
CSMD1-215ENST00000537824 ATP5J2-PTCD1G3V325 749 aa6.18□□□□□ -1.42
CSMD1-215ENST00000537824 RNF113AO15541 343 aaKnown RBP6.18□□□□□ -1.42
CSMD1-215ENST00000537824 PTCD1O75127 700 aaKnown RBP6.18□□□□□ -1.42
CSMD1-215ENST00000537824 COPB1P53618 953 aaKnown RBP6.18□□□□□ -1.42
CSMD1-215ENST00000537824 CAVIN4Q5BKX8 364 aa6.18□□□□□ -1.42
CSMD1-215ENST00000537824 PALM2Q8IXS6 379 aa6.18□□□□□ -1.42
CSMD1-215ENST00000537824 CDC5LQ99459 802 aaKnown RBP6.18□□□□□ -1.42
CSMD1-215ENST00000537824 NFU1Q9UMS0 254 aa6.18□□□□□ -1.42
CSMD1-215ENST00000537824 KRT75O95678 551 aa6.18□□□□□ -1.42
CSMD1-215ENST00000537824 RASSF7Q02833 373 aa6.18□□□□□ -1.42
CSMD1-215ENST00000537824 TRIM60Q495X7 471 aa6.18□□□□□ -1.42
CSMD1-215ENST00000537824 ANKRD13CQ8N6S4 541 aa6.18□□□□□ -1.42
CSMD1-215ENST00000537824 RSAD2Q8WXG1 361 aa6.18□□□□□ -1.42
CSMD1-215ENST00000537824 STAMQ92783 540 aa6.18□□□□□ -1.42
CSMD1-215ENST00000537824 FGFR1OP2Q9NVK5 253 aa6.18□□□□□ -1.42
CSMD1-215ENST00000537824 AFG3L2Q9Y4W6 797 aa6.18□□□□□ -1.42
CSMD1-215ENST00000537824 SOWAHDA6NJG2 315 aa6.18□□□□□ -1.42
CSMD1-215ENST00000537824 STX10O60499 249 aa6.18□□□□□ -1.42
CSMD1-215ENST00000537824 JADE1Q6IE81 842 aa6.18□□□□□ -1.42
CSMD1-215ENST00000537824 B4GALNT2Q8NHY0 566 aa6.18□□□□□ -1.42
CSMD1-215ENST00000537824 RPRD2Q5VT52 1461 aaKnown RBP6.18□□□□□ -1.42
CSMD1-215ENST00000537824 PRXQ9BXM0 1461 aa6.18□□□□□ -1.42
CSMD1-215ENST00000537824 SPDYE3A6NKU9 549 aa6.18□□□□□ -1.42
CSMD1-215ENST00000537824 POC1B-GALNT4F8VUJ3 575 aa6.18□□□□□ -1.42
CSMD1-215ENST00000537824 GSTA1P08263 222 aa6.18□□□□□ -1.42
CSMD1-215ENST00000537824 GSTA2P09210 222 aa6.18□□□□□ -1.42
CSMD1-215ENST00000537824 CTCFP49711 727 aaPredicted RBP6.18□□□□□ -1.42
CSMD1-215ENST00000537824 SV2BQ7L1I2 683 aa6.18□□□□□ -1.42
CSMD1-215ENST00000537824 NT5C3AQ9H0P0 336 aa6.18□□□□□ -1.42
CSMD1-215ENST00000537824 HNRNPH1P31943 449 aaKnown RBP6.18□□□□□ -1.42
CSMD1-215ENST00000537824 TMEM154Q6P9G4 183 aa6.18□□□□□ -1.42
CSMD1-215ENST00000537824 TMTC2Q8N394 836 aa6.18□□□□□ -1.42
CSMD1-215ENST00000537824 PHKBQ93100 1093 aa6.18□□□□□ -1.42
CSMD1-215ENST00000537824 CHPF2Q9P2E5 772 aa6.18□□□□□ -1.42
CSMD1-215ENST00000537824 BASP1P80723 227 aaKnown RBP6.18□□□□□ -1.42
CSMD1-215ENST00000537824 CCDC84Q86UT8 332 aaPredicted RBP6.18□□□□□ -1.42
CSMD1-215ENST00000537824 FTOQ9C0B1 505 aaKnown RBP eCLIP6.18□□□□□ -1.42
CSMD1-215ENST00000537824 DIAPH2O60879 1101 aa6.17□□□□□ -1.42
CSMD1-215ENST00000537824 TTC4O95801 387 aa6.17□□□□□ -1.42
CSMD1-215ENST00000537824 FLOT2Q14254 428 aa6.17□□□□□ -1.42
CSMD1-215ENST00000537824 RBM26Q5T8P6 1007 aaKnown RBP6.17□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms