RNA–Protein interactions for RNA: ENST00000537607.5

CIT-208, Transcript of citron rho-interacting serine/threonine kinase, human

TSL 5

Gene CIT, Length 4,958 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CIT-208	ENST00000537607	GIMAP7	Q8NHV1	300 aa		13.57	□□□□□ -0.24
CIT-208	ENST00000537607	DEPTOR	Q8TB45	409 aa		13.57	□□□□□ -0.24
CIT-208	ENST00000537607	TSC1	Q92574	1164 aa		13.57	□□□□□ -0.24
CIT-208	ENST00000537607	PIGS	Q96S52	555 aa		13.57	□□□□□ -0.24
CIT-208	ENST00000537607	NUCKS1	Q9H1E3	243 aa	Known RBP	13.57	□□□□□ -0.24
CIT-208	ENST00000537607	GLI2	P10070	1586 aa		13.57	□□□□□ -0.24
CIT-208	ENST00000537607	EBAG9	O00559	213 aa		13.57	□□□□□ -0.24
CIT-208	ENST00000537607	ACTN4	O43707	911 aa	Known RBP	13.57	□□□□□ -0.24
CIT-208	ENST00000537607	CC2D2B	Q6DHV5	1058 aa		13.57	□□□□□ -0.24
CIT-208	ENST00000537607	ARHGAP27	Q6ZUM4	889 aa		13.57	□□□□□ -0.24
CIT-208	ENST00000537607	DAAM2	Q86T65	1068 aa		13.57	□□□□□ -0.24
CIT-208	ENST00000537607	NBPF11	Q86T75	865 aa		13.57	□□□□□ -0.24
CIT-208	ENST00000537607	CDAN1	Q8IWY9	1227 aa		13.57	□□□□□ -0.24
CIT-208	ENST00000537607	GJA10	Q969M2	543 aa		13.57	□□□□□ -0.24
CIT-208	ENST00000537607	MLXIP	Q9HAP2	919 aa		13.57	□□□□□ -0.24
CIT-208	ENST00000537607	PCDHA4	Q9UN74	947 aa		13.57	□□□□□ -0.24
CIT-208	ENST00000537607	NCAPD2	Q15021	1401 aa		13.57	□□□□□ -0.24
CIT-208	ENST00000537607	RAD17	O75943	681 aa		13.57	□□□□□ -0.24
CIT-208	ENST00000537607	MMP1	P03956	469 aa		13.57	□□□□□ -0.24
CIT-208	ENST00000537607	ABCB4	P21439	1286 aa		13.57	□□□□□ -0.24
CIT-208	ENST00000537607	HPD	P32754	393 aa	Predicted RBP	13.57	□□□□□ -0.24
CIT-208	ENST00000537607	LIFR	P42702	1097 aa		13.57	□□□□□ -0.24
CIT-208	ENST00000537607	TRAPPC10	P48553	1259 aa		13.57	□□□□□ -0.24
CIT-208	ENST00000537607	GRAP	Q13588	217 aa		13.57	□□□□□ -0.24
CIT-208	ENST00000537607	SMYD4	Q8IYR2	804 aa	Predicted RBP	13.57	□□□□□ -0.24
CIT-208	ENST00000537607	GRAPL	Q8TC17	118 aa	Predicted RBP	13.57	□□□□□ -0.24
CIT-208	ENST00000537607	IWS1	Q96ST2	819 aa		13.57	□□□□□ -0.24
CIT-208	ENST00000537607	OGFR	Q9NZT2	677 aa		13.57	□□□□□ -0.24
CIT-208	ENST00000537607	USP17L3	A6NCW0	530 aa		13.57	□□□□□ -0.24
CIT-208	ENST00000537607	USP17L4	A6NCW7	530 aa		13.57	□□□□□ -0.24
CIT-208	ENST00000537607	FOS	P01100	380 aa	Predicted RBP	13.57	□□□□□ -0.24
CIT-208	ENST00000537607	ATP2A2	P16615	1042 aa	Known RBP	13.57	□□□□□ -0.24
CIT-208	ENST00000537607	TAF12	Q16514	161 aa		13.57	□□□□□ -0.24
CIT-208	ENST00000537607	USP17L1	Q7RTZ2	530 aa		13.57	□□□□□ -0.24
CIT-208	ENST00000537607	GRAMD1C	Q8IYS0	662 aa		13.57	□□□□□ -0.24
CIT-208	ENST00000537607	SREK1	Q8WXA9	508 aa	Known RBP	13.57	□□□□□ -0.24
CIT-208	ENST00000537607	COA7	Q96BR5	231 aa		13.57	□□□□□ -0.24
CIT-208	ENST00000537607	TTC14	Q96N46	770 aa		13.57	□□□□□ -0.24
CIT-208	ENST00000537607	GSDMA	Q96QA5	445 aa		13.57	□□□□□ -0.24
CIT-208	ENST00000537607	PABPN1L	A6NDY0	278 aa	Known RBP	13.56	□□□□□ -0.24
CIT-208	ENST00000537607	U2AF1L4	Q8WU68	220 aa	Known RBP	13.56	□□□□□ -0.24
CIT-208	ENST00000537607	TIGD1	Q96MW7	591 aa		13.56	□□□□□ -0.24
CIT-208	ENST00000537607	PLEKHA4	Q9H4M7	779 aa		13.56	□□□□□ -0.24
CIT-208	ENST00000537607	GJB4	Q9NTQ9	266 aa		13.56	□□□□□ -0.24
CIT-208	ENST00000537607	COL4A3BP	Q9Y5P4	624 aa		13.56	□□□□□ -0.24
CIT-208	ENST00000537607	RPS6KA4	O75676	772 aa		13.56	□□□□□ -0.24
CIT-208	ENST00000537607	PABPC4	Q13310	644 aa	Known RBP eCLIP	13.56	□□□□□ -0.24
CIT-208	ENST00000537607	ADAM9	Q13443	819 aa		13.56	□□□□□ -0.24
CIT-208	ENST00000537607	LRRC8A	Q8IWT6	810 aa		13.56	□□□□□ -0.24
CIT-208	ENST00000537607	TBCK	Q8TEA7	893 aa		13.56	□□□□□ -0.24
CIT-208	ENST00000537607	KANSL2	Q9H9L4	492 aa		13.56	□□□□□ -0.24
CIT-208	ENST00000537607	SWAP70	Q9UH65	585 aa		13.56	□□□□□ -0.24
CIT-208	ENST00000537607	CYP2E1	P05181	493 aa	Predicted RBP	13.56	□□□□□ -0.24
CIT-208	ENST00000537607	CALR	P27797	417 aa	Known RBP	13.56	□□□□□ -0.24
CIT-208	ENST00000537607		K7ENM7	598 aa		13.55	□□□□□ -0.24
CIT-208	ENST00000537607	FER	P16591	822 aa		13.55	□□□□□ -0.24
CIT-208	ENST00000537607	C11orf57	Q6ZUT1	292 aa	Predicted RBP	13.55	□□□□□ -0.24
CIT-208	ENST00000537607	CCDC127	Q96BQ5	260 aa		13.55	□□□□□ -0.24
CIT-208	ENST00000537607	MRRF	Q96E11	262 aa	Known RBP	13.55	□□□□□ -0.24
CIT-208	ENST00000537607	TEKT3	Q9BXF9	490 aa		13.55	□□□□□ -0.24
CIT-208	ENST00000537607	ASIC3	Q9UHC3	531 aa		13.55	□□□□□ -0.24
CIT-208	ENST00000537607	NRBP1	Q9UHY1	535 aa		13.55	□□□□□ -0.24
CIT-208	ENST00000537607	SERPINA10	Q9UK55	444 aa		13.55	□□□□□ -0.24
CIT-208	ENST00000537607	MMP10	P09238	476 aa		13.55	□□□□□ -0.24
CIT-208	ENST00000537607	PRDX5	P30044	214 aa		13.55	□□□□□ -0.24
CIT-208	ENST00000537607	MXRA7	P84157	204 aa		13.55	□□□□□ -0.24
CIT-208	ENST00000537607	UAP1	Q16222	522 aa	Predicted RBP	13.55	□□□□□ -0.24
CIT-208	ENST00000537607	C6orf163	Q5TEZ5	329 aa		13.55	□□□□□ -0.24
CIT-208	ENST00000537607	METTL13	Q8N6R0	699 aa		13.55	□□□□□ -0.24
CIT-208	ENST00000537607	SUGCT	Q9HAC7	445 aa		13.55	□□□□□ -0.24
CIT-208	ENST00000537607	FAM169A	Q9Y6X4	670 aa		13.55	□□□□□ -0.24
CIT-208	ENST00000537607	PTPN21	Q16825	1174 aa		13.55	□□□□□ -0.24
CIT-208	ENST00000537607	CFAP221	Q4G0U5	840 aa		13.55	□□□□□ -0.24
CIT-208	ENST00000537607	IFT20	Q8IY31	132 aa		13.55	□□□□□ -0.24
CIT-208	ENST00000537607	GDAP1L1	Q96MZ0	367 aa		13.55	□□□□□ -0.24
CIT-208	ENST00000537607	SSX2IP	Q9Y2D8	614 aa		13.55	□□□□□ -0.24
CIT-208	ENST00000537607	UTP11	Q9Y3A2	253 aa	Known RBP	13.55	□□□□□ -0.24
CIT-208	ENST00000537607	SAR1B	Q9Y6B6	198 aa		13.55	□□□□□ -0.24
CIT-208	ENST00000537607	CDC42BPG	Q6DT37	1551 aa		13.55	□□□□□ -0.24
CIT-208	ENST00000537607	ETF1	P62495	437 aa	Known RBP	13.55	□□□□□ -0.24
CIT-208	ENST00000537607	PPARD	Q03181	441 aa		13.55	□□□□□ -0.24
CIT-208	ENST00000537607	PTPRO	Q16827	1216 aa		13.55	□□□□□ -0.24
CIT-208	ENST00000537607	MCF2L2	Q86YR7	1114 aa		13.55	□□□□□ -0.24
CIT-208	ENST00000537607	SULF1	Q8IWU6	871 aa		13.55	□□□□□ -0.24
CIT-208	ENST00000537607	GPR161	Q8N6U8	529 aa	Known RBP	13.55	□□□□□ -0.24
CIT-208	ENST00000537607	ANKS4B	Q8N8V4	417 aa		13.55	□□□□□ -0.24
CIT-208	ENST00000537607	LARP4B	Q92615	738 aa	Known RBP	13.55	□□□□□ -0.24
CIT-208	ENST00000537607	PPP2R2C	Q9Y2T4	447 aa		13.55	□□□□□ -0.24
CIT-208	ENST00000537607	PNPLA6	Q8IY17	1366 aa		13.55	□□□□□ -0.24
CIT-208	ENST00000537607	POLR2F	P61218	127 aa	Known RBP	13.54	□□□□□ -0.24
CIT-208	ENST00000537607	REST	Q13127	1097 aa		13.54	□□□□□ -0.24
CIT-208	ENST00000537607	TDRD7	Q8NHU6	1098 aa	Known RBP	13.54	□□□□□ -0.24
CIT-208	ENST00000537607	RXRB	P28702	533 aa		13.54	□□□□□ -0.24
CIT-208	ENST00000537607	IQCD	Q96DY2	449 aa		13.54	□□□□□ -0.24
CIT-208	ENST00000537607	PCDHB6	Q9Y5E3	794 aa		13.54	□□□□□ -0.24
CIT-208	ENST00000537607	GADL1	Q6ZQY3	521 aa		13.54	□□□□□ -0.24
CIT-208	ENST00000537607	ANKRD13C	Q8N6S4	541 aa		13.54	□□□□□ -0.24
CIT-208	ENST00000537607	RABGAP1	Q9Y3P9	1069 aa		13.54	□□□□□ -0.24
CIT-208	ENST00000537607	MNAT1	P51948	309 aa		13.54	□□□□□ -0.24
CIT-208	ENST00000537607	COPB1	P53618	953 aa	Known RBP	13.54	□□□□□ -0.24

Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms