RNA–Protein interactions for RNA: ENST00000537162.5

CPSF7-217, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 3

Gene CPSF7, Length 801 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-217ENST00000537162 ZGPATQ8N5A5 531 aaKnown RBP11.8□□□□□ -0.52
CPSF7-217ENST00000537162 TGS1Q96RS0 853 aaKnown RBP11.8□□□□□ -0.52
CPSF7-217ENST00000537162 C17orf80Q9BSJ5 609 aa11.8□□□□□ -0.52
CPSF7-217ENST00000537162 CLDND1Q9NY35 253 aa11.8□□□□□ -0.52
CPSF7-217ENST00000537162 SAP30BPQ9UHR5 308 aaKnown RBP11.8□□□□□ -0.52
CPSF7-217ENST00000537162 DIS3Q9Y2L1 958 aaKnown RBP11.8□□□□□ -0.52
CPSF7-217ENST00000537162 CACNA1FO60840 1977 aa11.79□□□□□ -0.52
CPSF7-217ENST00000537162 STXBP3O00186 592 aa11.79□□□□□ -0.52
CPSF7-217ENST00000537162 TMEM132BQ14DG7 1078 aa11.79□□□□□ -0.52
CPSF7-217ENST00000537162 ATP2B3Q16720 1220 aa11.79□□□□□ -0.52
CPSF7-217ENST00000537162 CCDC144BQ3MJ40 725 aa11.79□□□□□ -0.52
CPSF7-217ENST00000537162 CCDC102BQ68D86 513 aa11.79□□□□□ -0.52
CPSF7-217ENST00000537162 NSUN4Q96CB9 384 aaKnown RBP11.79□□□□□ -0.52
CPSF7-217ENST00000537162 MRPL38Q96DV4 380 aaKnown RBP11.79□□□□□ -0.52
CPSF7-217ENST00000537162 POP1Q99575 1024 aaKnown RBP11.79□□□□□ -0.52
CPSF7-217ENST00000537162 TANGO6Q9C0B7 1094 aa11.79□□□□□ -0.52
CPSF7-217ENST00000537162 DHX36Q9H2U1 1008 aaKnown RBP11.79□□□□□ -0.52
CPSF7-217ENST00000537162 TRMT13Q9NUP7 481 aaKnown RBP11.79□□□□□ -0.52
CPSF7-217ENST00000537162 HOXC10Q9NYD6 342 aa11.79□□□□□ -0.52
CPSF7-217ENST00000537162 ADAMTS8Q9UP79 889 aa11.79□□□□□ -0.52
CPSF7-217ENST00000537162 A0A1W2PRG0 241 aa11.78□□□□□ -0.52
CPSF7-217ENST00000537162 EYA2O00167 538 aa11.78□□□□□ -0.52
CPSF7-217ENST00000537162 GUCY1A2P33402 732 aa11.78□□□□□ -0.52
CPSF7-217ENST00000537162 RFX5P48382 616 aaPredicted RBP11.78□□□□□ -0.52
CPSF7-217ENST00000537162 WDR5P61964 334 aaKnown RBP11.78□□□□□ -0.52
CPSF7-217ENST00000537162 SIGLEC14Q08ET2 396 aa11.78□□□□□ -0.52
CPSF7-217ENST00000537162 TBC1D9Q6ZT07 1266 aa11.78□□□□□ -0.52
CPSF7-217ENST00000537162 ERICH6Q7L0X2 663 aa11.78□□□□□ -0.52
CPSF7-217ENST00000537162 RPAINQ86UA6 219 aa11.78□□□□□ -0.52
CPSF7-217ENST00000537162 BANK1Q8NDB2 785 aa11.78□□□□□ -0.52
CPSF7-217ENST00000537162 TGFBRAP1Q8WUH2 860 aa11.78□□□□□ -0.52
CPSF7-217ENST00000537162 TRIM34Q9BYJ4 488 aa11.78□□□□□ -0.52
CPSF7-217ENST00000537162 FTOQ9C0B1 505 aaKnown RBP eCLIP11.78□□□□□ -0.52
CPSF7-217ENST00000537162 FLT1P17948 1338 aa11.78□□□□□ -0.52
CPSF7-217ENST00000537162 C11orf97A0A1B0GVM6 126 aaPredicted RBP11.77□□□□□ -0.53
CPSF7-217ENST00000537162 MAP4K4O95819 1239 aaPredicted RBP11.77□□□□□ -0.53
CPSF7-217ENST00000537162 NKX3-2P78367 333 aa11.77□□□□□ -0.53
CPSF7-217ENST00000537162 ACVR2BQ13705 512 aa11.77□□□□□ -0.53
CPSF7-217ENST00000537162 PUM1Q14671 1186 aaKnown RBP eCLIP11.77□□□□□ -0.53
CPSF7-217ENST00000537162 TCTN1Q2MV58 587 aa11.77□□□□□ -0.53
CPSF7-217ENST00000537162 SPTY2D1Q68D10 685 aaPredicted RBP11.77□□□□□ -0.53
CPSF7-217ENST00000537162 KIAA2013Q8IYS2 634 aa11.77□□□□□ -0.53
CPSF7-217ENST00000537162 FBXO22Q8NEZ5 403 aa11.77□□□□□ -0.53
CPSF7-217ENST00000537162 PPP1R13LQ8WUF5 828 aa11.77□□□□□ -0.53
CPSF7-217ENST00000537162 ZBED2Q9BTP6 218 aa11.77□□□□□ -0.53
CPSF7-217ENST00000537162 ALDH8A1Q9H2A2 487 aaPredicted RBP11.77□□□□□ -0.53
CPSF7-217ENST00000537162 SPC25Q9HBM1 224 aa11.77□□□□□ -0.53
CPSF7-217ENST00000537162 U3KPZ7 1027 aaPredicted RBP11.77□□□□□ -0.53
CPSF7-217ENST00000537162 APAF1O14727 1248 aa11.76□□□□□ -0.53
CPSF7-217ENST00000537162 ALDH1L1O75891 902 aa11.76□□□□□ -0.53
CPSF7-217ENST00000537162 MKRN4PQ13434 485 aaPredicted RBP11.76□□□□□ -0.53
CPSF7-217ENST00000537162 TATDN1Q6P1N9 297 aa11.76□□□□□ -0.53
CPSF7-217ENST00000537162 PI16Q6UXB8 463 aa11.76□□□□□ -0.53
CPSF7-217ENST00000537162 MAMDC4Q6UXC1 1216 aa11.76□□□□□ -0.53
CPSF7-217ENST00000537162 MB21D1Q8N884 522 aa11.76□□□□□ -0.53
CPSF7-217ENST00000537162 TMEM105Q8N8V8 129 aa11.76□□□□□ -0.53
CPSF7-217ENST00000537162 IQCF3P0C7M6 154 aa11.75□□□□□ -0.53
CPSF7-217ENST00000537162 CALD1Q05682 793 aaKnown RBP11.75□□□□□ -0.53
CPSF7-217ENST00000537162 CTC1Q2NKJ3 1217 aa11.75□□□□□ -0.53
CPSF7-217ENST00000537162 FAM117BQ6P1L5 589 aa11.75□□□□□ -0.53
CPSF7-217ENST00000537162 SLC4A10Q6U841 1118 aa11.75□□□□□ -0.53
CPSF7-217ENST00000537162 FGD4Q96M96 766 aa11.75□□□□□ -0.53
CPSF7-217ENST00000537162 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.75□□□□□ -0.53
CPSF7-217ENST00000537162 AATFQ9NY61 560 aaKnown RBP eCLIP11.75□□□□□ -0.53
CPSF7-217ENST00000537162 MYH1P12882 1939 aa11.75□□□□□ -0.53
CPSF7-217ENST00000537162 ANKRD11Q6UB99 2663 aaPredicted RBP11.75□□□□□ -0.53
CPSF7-217ENST00000537162 LOC730098B7Z3J9 87 aa11.74□□□□□ -0.53
CPSF7-217ENST00000537162 TBX10O75333 385 aa11.74□□□□□ -0.53
CPSF7-217ENST00000537162 FLOT1O75955 427 aa11.74□□□□□ -0.53
CPSF7-217ENST00000537162 GJB5O95377 273 aa11.74□□□□□ -0.53
CPSF7-217ENST00000537162 SLC25A27O95847 323 aa11.74□□□□□ -0.53
CPSF7-217ENST00000537162 LDHCP07864 332 aa11.74□□□□□ -0.53
CPSF7-217ENST00000537162 GTF2F1P35269 517 aaKnown RBP eCLIP11.74□□□□□ -0.535e-10■■■■■ 57.2
CPSF7-217ENST00000537162 KCNJ6P48051 423 aa11.74□□□□□ -0.53
CPSF7-217ENST00000537162 GPNMBQ14956 572 aa11.74□□□□□ -0.53
CPSF7-217ENST00000537162 SEPT2Q15019 361 aa11.74□□□□□ -0.53
CPSF7-217ENST00000537162 TIGD5Q53EQ6 642 aa11.74□□□□□ -0.53
CPSF7-217ENST00000537162 TMEM63BQ5T3F8 832 aa11.74□□□□□ -0.53
CPSF7-217ENST00000537162 RIOX2Q8IUF8 465 aa11.74□□□□□ -0.53
CPSF7-217ENST00000537162 RAD9AQ99638 391 aa11.74□□□□□ -0.53
CPSF7-217ENST00000537162 SRCIN1Q9C0H9 1055 aa11.74□□□□□ -0.53
CPSF7-217ENST00000537162 KATNBL1Q9H079 304 aa11.74□□□□□ -0.53
CPSF7-217ENST00000537162 SIL1Q9H173 461 aa11.74□□□□□ -0.53
CPSF7-217ENST00000537162 DLL3Q9NYJ7 618 aa11.74□□□□□ -0.53
CPSF7-217ENST00000537162 PDS5AQ29RF7 1337 aaKnown RBP11.74□□□□□ -0.53
CPSF7-217ENST00000537162 LINC01565O15544 149 aa11.73□□□□□ -0.53
CPSF7-217ENST00000537162 CABYRO75952 493 aa11.73□□□□□ -0.53
CPSF7-217ENST00000537162 BAIAP3O94812 1187 aa11.73□□□□□ -0.53
CPSF7-217ENST00000537162 TNKSO95271 1327 aa11.73□□□□□ -0.53
CPSF7-217ENST00000537162 ARP10275 920 aa11.73□□□□□ -0.53
CPSF7-217ENST00000537162 RFC2P35250 354 aa11.73□□□□□ -0.53
CPSF7-217ENST00000537162 NUBP1P53384 320 aa11.73□□□□□ -0.53
CPSF7-217ENST00000537162 GSTO1P78417 241 aa11.73□□□□□ -0.53
CPSF7-217ENST00000537162 SMAD4Q13485 552 aaKnown RBP11.73□□□□□ -0.53
CPSF7-217ENST00000537162 ABCB5Q2M3G0 1257 aa11.73□□□□□ -0.53
CPSF7-217ENST00000537162 ADGRA1Q86SQ6 560 aa11.73□□□□□ -0.53
CPSF7-217ENST00000537162 NLRC5Q86WI3 1866 aa11.73□□□□□ -0.53
CPSF7-217ENST00000537162 MSL3Q8N5Y2 521 aaKnown RBP11.73□□□□□ -0.53
CPSF7-217ENST00000537162 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.73□□□□□ -0.53
CPSF7-217ENST00000537162 NSUN3Q9H649 340 aaKnown RBP11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms