RNA–Protein interactions for RNA: ENST00000536797.5

LPCAT3-204, Transcript of lysophosphatidylcholine acyltransferase 3, humanhuman

TSL 2

Gene LPCAT3, Length 1,412 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT3-204ENST00000536797 FBXO40Q9UH90 709 aa24.49■■□□□ 1.51
LPCAT3-204ENST00000536797 GTF3C3Q9Y5Q9 886 aa24.49■■□□□ 1.51
LPCAT3-204ENST00000536797 PSMA5P28066 241 aa24.48■■□□□ 1.51
LPCAT3-204ENST00000536797 UBXN2AP68543 259 aa24.48■■□□□ 1.51
LPCAT3-204ENST00000536797 KCTD2Q14681 263 aa24.48■■□□□ 1.51
LPCAT3-204ENST00000536797 GRM4Q14833 912 aa24.48■■□□□ 1.51
LPCAT3-204ENST00000536797 DPP9Q86TI2 863 aa24.48■■□□□ 1.51
LPCAT3-204ENST00000536797 TRMT44Q8IYL2 757 aaKnown RBP24.48■■□□□ 1.51
LPCAT3-204ENST00000536797 ZNF654Q8IZM8 581 aa24.48■■□□□ 1.51
LPCAT3-204ENST00000536797 CHST13Q8NET6 341 aa24.48■■□□□ 1.51
LPCAT3-204ENST00000536797 NUP133Q8WUM0 1156 aa24.48■■□□□ 1.51
LPCAT3-204ENST00000536797 CPVLQ9H3G5 476 aa24.48■■□□□ 1.51
LPCAT3-204ENST00000536797 MAD2L2Q9UI95 211 aa24.48■■□□□ 1.51
LPCAT3-204ENST00000536797 ZNFX1Q9P2E3 1918 aaKnown RBP24.48■■□□□ 1.51
LPCAT3-204ENST00000536797 DDAH1O94760 285 aa24.47■■□□□ 1.51
LPCAT3-204ENST00000536797 ICAM1P05362 532 aa24.47■■□□□ 1.51
LPCAT3-204ENST00000536797 TKFCQ3LXA3 575 aa24.47■■□□□ 1.51
LPCAT3-204ENST00000536797 BLOC1S2Q6QNY1 142 aa24.47■■□□□ 1.51
LPCAT3-204ENST00000536797 STAG2Q8N3U4 1231 aa24.47■■□□□ 1.51
LPCAT3-204ENST00000536797 TCEANC2Q96MN5 208 aa24.47■■□□□ 1.51
LPCAT3-204ENST00000536797 HOMER2Q9NSB8 354 aa24.47■■□□□ 1.51
LPCAT3-204ENST00000536797 SLC5A4Q9NY91 659 aa24.47■■□□□ 1.51
LPCAT3-204ENST00000536797 CCPG1Q9ULG6 757 aa24.47■■□□□ 1.51
LPCAT3-204ENST00000536797 PALM3A6NDB9 673 aaPredicted RBP24.46■■□□□ 1.51
LPCAT3-204ENST00000536797 KLRF2D3W0D1 207 aa24.46■■□□□ 1.51
LPCAT3-204ENST00000536797 DHX16O60231 1041 aaKnown RBP24.46■■□□□ 1.51
LPCAT3-204ENST00000536797 HOXC6P09630 235 aa24.46■■□□□ 1.51
LPCAT3-204ENST00000536797 ALAS1P13196 640 aa24.46■■□□□ 1.51
LPCAT3-204ENST00000536797 ADGRF4Q8IZF3 695 aa24.46■■□□□ 1.51
LPCAT3-204ENST00000536797 PNMA2Q9UL42 364 aa24.46■■□□□ 1.51
LPCAT3-204ENST00000536797 SLC12A7Q9Y666 1083 aa24.46■■□□□ 1.51
LPCAT3-204ENST00000536797 CAPN15O75808 1086 aa24.45■■□□□ 1.51
LPCAT3-204ENST00000536797 HMGCRP04035 888 aa24.45■■□□□ 1.51
LPCAT3-204ENST00000536797 SGMS1Q86VZ5 419 aa24.45■■□□□ 1.51
LPCAT3-204ENST00000536797 CTCFLQ8NI51 663 aaPredicted RBP24.45■■□□□ 1.51
LPCAT3-204ENST00000536797 TRIB2Q92519 343 aa24.45■■□□□ 1.51
LPCAT3-204ENST00000536797 TRERF1Q96PN7 1200 aa24.45■■□□□ 1.51
LPCAT3-204ENST00000536797 MAP3K14Q99558 947 aa24.45■■□□□ 1.51
LPCAT3-204ENST00000536797 MYL10Q9BUA6 226 aa24.45■■□□□ 1.51
LPCAT3-204ENST00000536797 ACAD9Q9H845 621 aa24.45■■□□□ 1.51
LPCAT3-204ENST00000536797 RNF146Q9NTX7 359 aa24.45■■□□□ 1.51
LPCAT3-204ENST00000536797 INHAP05111 366 aa24.44■■□□□ 1.5
LPCAT3-204ENST00000536797 CALM1P0DP23 149 aa24.44■■□□□ 1.5
LPCAT3-204ENST00000536797 CALM2P0DP24 149 aa24.44■■□□□ 1.5
LPCAT3-204ENST00000536797 CALM3P0DP25 149 aa24.44■■□□□ 1.5
LPCAT3-204ENST00000536797 CASTP20810 708 aaKnown RBP24.44■■□□□ 1.5
LPCAT3-204ENST00000536797 KIF5BP33176 963 aa24.44■■□□□ 1.5
LPCAT3-204ENST00000536797 FGD1P98174 961 aa24.44■■□□□ 1.5
LPCAT3-204ENST00000536797 COBLO75128 1261 aa24.44■■□□□ 1.5
LPCAT3-204ENST00000536797 MYCP01106 439 aaPredicted RBP24.44■■□□□ 1.5
LPCAT3-204ENST00000536797 CPA1P15085 419 aa24.44■■□□□ 1.5
LPCAT3-204ENST00000536797 CDC37Q16543 378 aaPredicted RBP24.44■■□□□ 1.5
LPCAT3-204ENST00000536797 CCL14Q16627 93 aa24.44■■□□□ 1.5
LPCAT3-204ENST00000536797 SYNE3Q6ZMZ3 975 aa24.44■■□□□ 1.5
LPCAT3-204ENST00000536797 DHX30Q7L2E3 1194 aaKnown RBP eCLIP24.44■■□□□ 1.5
LPCAT3-204ENST00000536797 ANKRD35Q8N283 1001 aa24.44■■□□□ 1.5
LPCAT3-204ENST00000536797 NPLOC4Q8TAT6 608 aa24.44■■□□□ 1.5
LPCAT3-204ENST00000536797 DDX11Q96FC9 970 aa24.44■■□□□ 1.5
LPCAT3-204ENST00000536797 VAT1LQ9HCJ6 419 aa24.44■■□□□ 1.5
LPCAT3-204ENST00000536797 MYH6P13533 1939 aa24.43■■□□□ 1.5
LPCAT3-204ENST00000536797 RPS6KB1P23443 525 aa24.43■■□□□ 1.5
LPCAT3-204ENST00000536797 JMJD4Q9H9V9 463 aa24.43■■□□□ 1.5
LPCAT3-204ENST00000536797 PLXNA1Q9UIW2 1896 aa24.42■■□□□ 1.5
LPCAT3-204ENST00000536797 PGK2P07205 417 aa24.42■■□□□ 1.5
LPCAT3-204ENST00000536797 C8orf34Q49A92 452 aa24.42■■□□□ 1.5
LPCAT3-204ENST00000536797 TMEM106CQ9BVX2 250 aa24.42■■□□□ 1.5
LPCAT3-204ENST00000536797 SMCHD1A6NHR9 2005 aa24.41■■□□□ 1.5
LPCAT3-204ENST00000536797 MTFR1Q15390 333 aa24.41■■□□□ 1.5
LPCAT3-204ENST00000536797 IFFO2Q5TF58 517 aa24.41■■□□□ 1.5
LPCAT3-204ENST00000536797 Q6ZUG5 572 aa24.41■■□□□ 1.5
LPCAT3-204ENST00000536797 SEC24BO95487 1268 aa24.4■■□□□ 1.5
LPCAT3-204ENST00000536797 TAL1P17542 331 aaPredicted RBP24.4■■□□□ 1.5
LPCAT3-204ENST00000536797 RXRAP19793 462 aa24.4■■□□□ 1.5
LPCAT3-204ENST00000536797 GNAQP50148 359 aa24.4■■□□□ 1.5
LPCAT3-204ENST00000536797 QRICH1Q2TAL8 776 aa24.4■■□□□ 1.5
LPCAT3-204ENST00000536797 MUM1L1Q5H9M0 696 aa24.4■■□□□ 1.5
LPCAT3-204ENST00000536797 MFSD14CQ5VZR4 134 aa24.4■■□□□ 1.5
LPCAT3-204ENST00000536797 OLFML2BQ68BL8 750 aa24.4■■□□□ 1.5
LPCAT3-204ENST00000536797 APOA5Q6Q788 366 aa24.4■■□□□ 1.5
LPCAT3-204ENST00000536797 RUFY3Q7L099 469 aa24.4■■□□□ 1.5
LPCAT3-204ENST00000536797 MICU3Q86XE3 530 aa24.4■■□□□ 1.5
LPCAT3-204ENST00000536797 TM6SF1Q9BZW5 370 aa24.4■■□□□ 1.5
LPCAT3-204ENST00000536797 ZSWIM6Q9HCJ5 1215 aa24.4■■□□□ 1.5
LPCAT3-204ENST00000536797 FLRT1Q9NZU1 646 aa24.4■■□□□ 1.5
LPCAT3-204ENST00000536797 DIS3Q9Y2L1 958 aaKnown RBP24.4■■□□□ 1.5
LPCAT3-204ENST00000536797 CYP46A1Q9Y6A2 500 aa24.4■■□□□ 1.5
LPCAT3-204ENST00000536797 PFASO15067 1338 aa24.39■■□□□ 1.5
LPCAT3-204ENST00000536797 CCL5P13501 91 aa24.39■■□□□ 1.5
LPCAT3-204ENST00000536797 SOX10P56693 466 aa24.39■■□□□ 1.5
LPCAT3-204ENST00000536797 ANAPC15P60006 121 aa24.39■■□□□ 1.5
LPCAT3-204ENST00000536797 TRIM32Q13049 653 aa24.39■■□□□ 1.5
LPCAT3-204ENST00000536797 USH1GQ495M9 461 aa24.39■■□□□ 1.5
LPCAT3-204ENST00000536797 RAB11FIP4Q86YS3 637 aa24.39■■□□□ 1.5
LPCAT3-204ENST00000536797 CCDC144CPQ8IYA2 1237 aa24.39■■□□□ 1.5
LPCAT3-204ENST00000536797 MAML3Q96JK9 1138 aa24.39■■□□□ 1.5
LPCAT3-204ENST00000536797 LZTS2Q9BRK4 669 aa24.39■■□□□ 1.5
LPCAT3-204ENST00000536797 RNF208Q9H0X6 261 aa24.39■■□□□ 1.5
LPCAT3-204ENST00000536797 RIOX1Q9H6W3 641 aa24.39■■□□□ 1.5
LPCAT3-204ENST00000536797 A1CFQ9NQ94 594 aaKnown RBP24.39■■□□□ 1.5
LPCAT3-204ENST00000536797 RBBP6Q7Z6E9 1792 aaKnown RBP24.38■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms