RNA–Protein interactions for RNA: ENST00000535788.1

UBB-204, Transcript of ubiquitin B, humanhuman

TSL 2 BASIC

Gene UBB, Length 704 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBB-204ENST00000535788 PRDM1O75626 825 aa10.92□□□□□ -0.66
UBB-204ENST00000535788 EEF2P13639 858 aaKnown RBP10.92□□□□□ -0.66
UBB-204ENST00000535788 RASA1P20936 1047 aa10.92□□□□□ -0.66
UBB-204ENST00000535788 NMIQ13287 307 aaPredicted RBP10.92□□□□□ -0.66
UBB-204ENST00000535788 PTPROQ16827 1216 aa10.92□□□□□ -0.66
UBB-204ENST00000535788 VPS53Q5VIR6 699 aa10.92□□□□□ -0.66
UBB-204ENST00000535788 CATSPERGQ6ZRH7 1159 aa10.92□□□□□ -0.66
UBB-204ENST00000535788 SIAH1Q8IUQ4 282 aa10.92□□□□□ -0.66
UBB-204ENST00000535788 GPRC5AQ8NFJ5 357 aa10.92□□□□□ -0.66
UBB-204ENST00000535788 SYMPKQ92797 1274 aaKnown RBP10.92□□□□□ -0.66
UBB-204ENST00000535788 PBXIP1Q96AQ6 731 aa10.92□□□□□ -0.66
UBB-204ENST00000535788 CDX2Q99626 313 aaPredicted RBP10.92□□□□□ -0.66
UBB-204ENST00000535788 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.92□□□□□ -0.66
UBB-204ENST00000535788 TANGO6Q9C0B7 1094 aa10.92□□□□□ -0.66
UBB-204ENST00000535788 NBPF3Q9H094 633 aa10.92□□□□□ -0.66
UBB-204ENST00000535788 KANSL2Q9H9L4 492 aa10.92□□□□□ -0.66
UBB-204ENST00000535788 RBPJLQ9UBG7 517 aa10.92□□□□□ -0.66
UBB-204ENST00000535788 FRMD4BQ9Y2L6 1034 aa10.92□□□□□ -0.66
UBB-204ENST00000535788 FAN1Q9Y2M0 1017 aa10.92□□□□□ -0.66
UBB-204ENST00000535788 TMX2Q9Y320 296 aa10.92□□□□□ -0.66
UBB-204ENST00000535788 SPDYE16A6NNV3 312 aaPredicted RBP10.91□□□□□ -0.66
UBB-204ENST00000535788 EPB41L2O43491 1005 aaKnown RBP10.91□□□□□ -0.66
UBB-204ENST00000535788 COPB2P35606 906 aa10.91□□□□□ -0.66
UBB-204ENST00000535788 ERVK-9P63128 1117 aa10.91□□□□□ -0.66
UBB-204ENST00000535788 ERVK-24P63145 666 aa10.91□□□□□ -0.66
UBB-204ENST00000535788 PPARAQ07869 468 aa10.91□□□□□ -0.66
UBB-204ENST00000535788 MCMDC2Q4G0Z9 681 aa10.91□□□□□ -0.66
UBB-204ENST00000535788 KIAA1755Q5JYT7 1200 aa10.91□□□□□ -0.66
UBB-204ENST00000535788 ZNF697Q5TEC3 545 aa10.91□□□□□ -0.66
UBB-204ENST00000535788 FAM109BQ6ICB4 259 aaPredicted RBP10.91□□□□□ -0.66
UBB-204ENST00000535788 POTEEQ6S8J3 1075 aa10.91□□□□□ -0.66
UBB-204ENST00000535788 SPICE1Q8N0Z3 855 aa10.91□□□□□ -0.66
UBB-204ENST00000535788 PXYLP1Q8TE99 480 aa10.91□□□□□ -0.66
UBB-204ENST00000535788 LPAR1Q92633 364 aa10.91□□□□□ -0.66
UBB-204ENST00000535788 FAM122AQ96E09 287 aa10.91□□□□□ -0.66
UBB-204ENST00000535788 XRN2Q9H0D6 950 aaKnown RBP eCLIP10.91□□□□□ -0.66
UBB-204ENST00000535788 C11orf49Q9H6J7 331 aa10.91□□□□□ -0.66
UBB-204ENST00000535788 VCPKMTQ9H867 229 aa10.91□□□□□ -0.66
UBB-204ENST00000535788 ZNF287Q9HBT7 754 aa10.91□□□□□ -0.66
UBB-204ENST00000535788 FEZ2Q9UHY8 353 aaPredicted RBP10.91□□□□□ -0.66
UBB-204ENST00000535788 A0A0G2JMZ2 1700 aa10.9□□□□□ -0.66
UBB-204ENST00000535788 TMEM265A0A087WTH1 108 aa10.9□□□□□ -0.66
UBB-204ENST00000535788 CNMDO75829 334 aa10.9□□□□□ -0.66
UBB-204ENST00000535788 SLC3A2P08195 630 aaKnown RBP10.9□□□□□ -0.66
UBB-204ENST00000535788 CAPN2P17655 700 aa10.9□□□□□ -0.66
UBB-204ENST00000535788 SDSP20132 328 aa10.9□□□□□ -0.66
UBB-204ENST00000535788 PDE4AP27815 886 aa10.9□□□□□ -0.66
UBB-204ENST00000535788 PLA2G5P39877 138 aa10.9□□□□□ -0.66
UBB-204ENST00000535788 C4orf46Q504U0 113 aa10.9□□□□□ -0.66
UBB-204ENST00000535788 ZNF589Q86UQ0 364 aaPredicted RBP10.9□□□□□ -0.66
UBB-204ENST00000535788 ZNF444Q8N0Y2 327 aaPredicted RBP10.9□□□□□ -0.66
UBB-204ENST00000535788 PORCNQ9H237 461 aa10.9□□□□□ -0.66
UBB-204ENST00000535788 RABGAP1Q9Y3P9 1069 aa10.9□□□□□ -0.66
UBB-204ENST00000535788 RLFQ13129 1914 aa10.9□□□□□ -0.67
UBB-204ENST00000535788 CCDC171Q6TFL3 1326 aa10.89□□□□□ -0.67
UBB-204ENST00000535788 PLXNB2O15031 1838 aa10.89□□□□□ -0.67
UBB-204ENST00000535788 PARP14Q460N5 1801 aa10.89□□□□□ -0.67
UBB-204ENST00000535788 IGKV6D-41A0A0C4DH26 115 aa10.89□□□□□ -0.67
UBB-204ENST00000535788 WDR46O15213 610 aaKnown RBP10.89□□□□□ -0.67
UBB-204ENST00000535788 ZNF500O60304 480 aaPredicted RBP10.89□□□□□ -0.67
UBB-204ENST00000535788 MAPK4P31152 587 aa10.89□□□□□ -0.67
UBB-204ENST00000535788 CTDSPL2Q05D32 466 aa10.89□□□□□ -0.67
UBB-204ENST00000535788 PDE4BQ07343 736 aa10.89□□□□□ -0.67
UBB-204ENST00000535788 COG2Q14746 738 aa10.89□□□□□ -0.67
UBB-204ENST00000535788 Q3C1V9 767 aa10.89□□□□□ -0.67
UBB-204ENST00000535788 LBX2Q6XYB7 198 aa10.89□□□□□ -0.67
UBB-204ENST00000535788 MAMSTRQ6ZN01 415 aa10.89□□□□□ -0.67
UBB-204ENST00000535788 ANKLE1Q8NAG6 615 aa10.89□□□□□ -0.67
UBB-204ENST00000535788 SOCS4Q8WXH5 440 aa10.89□□□□□ -0.67
UBB-204ENST00000535788 MYLIPQ8WY64 445 aa10.89□□□□□ -0.67
UBB-204ENST00000535788 SENP7Q9BQF6 1050 aa10.89□□□□□ -0.67
UBB-204ENST00000535788 DIAPH3Q9NSV4 1193 aa10.89□□□□□ -0.67
UBB-204ENST00000535788 BTBD7Q9P203 1132 aa10.89□□□□□ -0.67
UBB-204ENST00000535788 PLIN4Q96Q06 1357 aa10.89□□□□□ -0.67
UBB-204ENST00000535788 MYH4Q9Y623 1939 aa10.88□□□□□ -0.67
UBB-204ENST00000535788 TNFRSF10AO00220 468 aa10.88□□□□□ -0.67
UBB-204ENST00000535788 FLOT1O75955 427 aa10.88□□□□□ -0.67
UBB-204ENST00000535788 TSPY3P0CV98 308 aa10.88□□□□□ -0.67
UBB-204ENST00000535788 TSPY8P0CW00 308 aa10.88□□□□□ -0.67
UBB-204ENST00000535788 CCNA1P78396 465 aa10.88□□□□□ -0.67
UBB-204ENST00000535788 ALX1Q15699 326 aa10.88□□□□□ -0.67
UBB-204ENST00000535788 CSPP1Q1MSJ5 1256 aa10.88□□□□□ -0.67
UBB-204ENST00000535788 FAM47AQ5JRC9 791 aa10.88□□□□□ -0.67
UBB-204ENST00000535788 CWC27Q6UX04 472 aaKnown RBP10.88□□□□□ -0.67
UBB-204ENST00000535788 ARMCX6Q7L4S7 300 aa10.88□□□□□ -0.67
UBB-204ENST00000535788 GPR142Q7Z601 462 aa10.88□□□□□ -0.67
UBB-204ENST00000535788 CEP95Q96GE4 821 aa10.88□□□□□ -0.67
UBB-204ENST00000535788 HMX1Q9NP08 348 aaPredicted RBP10.88□□□□□ -0.67
UBB-204ENST00000535788 NYAP2Q9P242 653 aa10.88□□□□□ -0.67
UBB-204ENST00000535788 GJD2Q9UKL4 321 aa10.88□□□□□ -0.67
UBB-204ENST00000535788 DDX52Q9Y2R4 599 aaKnown RBP eCLIP10.88□□□□□ -0.67
UBB-204ENST00000535788 DNAH12Q6ZR08 3092 aa10.88□□□□□ -0.67
UBB-204ENST00000535788 HIP1O00291 1037 aa10.87□□□□□ -0.67
UBB-204ENST00000535788 STK10O94804 968 aaKnown RBP10.87□□□□□ -0.67
UBB-204ENST00000535788 FGAP02671 866 aa10.87□□□□□ -0.67
UBB-204ENST00000535788 HSPD1P10809 573 aaKnown RBP10.87□□□□□ -0.67
UBB-204ENST00000535788 GSPT1P15170 499 aaKnown RBP10.87□□□□□ -0.67
UBB-204ENST00000535788 CYP2B6P20813 491 aa10.87□□□□□ -0.67
UBB-204ENST00000535788 DSG3P32926 999 aa10.87□□□□□ -0.67
UBB-204ENST00000535788 TFAP4Q01664 338 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms