RNA–Protein interactions for RNA: ENST00000534283.1

RELA-223, Transcript of RELA proto-oncogene, NF-kB subunit, human

TSL 5

Gene RELA, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RELA-223	ENST00000534283	ACVR2B	Q13705	512 aa		28.74	■■■□□ 2.19
RELA-223	ENST00000534283	CHMP4C	Q96CF2	233 aa		28.74	■■■□□ 2.19
RELA-223	ENST00000534283	LNPK	Q9C0E8	428 aa		28.74	■■■□□ 2.19
RELA-223	ENST00000534283	SYNRG	Q9UMZ2	1314 aa		28.73	■■■□□ 2.19
RELA-223	ENST00000534283		A0A1W2PQ45	241 aa	Predicted RBP	28.73	■■■□□ 2.19
RELA-223	ENST00000534283		A0A1W2PQY0	241 aa		28.73	■■■□□ 2.19
RELA-223	ENST00000534283	KCTD1	Q719H9	257 aa		28.73	■■■□□ 2.19
RELA-223	ENST00000534283	RASGRP2	Q7LDG7	609 aa		28.73	■■■□□ 2.19
RELA-223	ENST00000534283	FAM133A	Q8N9E0	248 aa		28.73	■■■□□ 2.19
RELA-223	ENST00000534283	KATNBL1	Q9H079	304 aa		28.73	■■■□□ 2.19
RELA-223	ENST00000534283	MTMR10	Q9NXD2	777 aa		28.73	■■■□□ 2.19
RELA-223	ENST00000534283	ZHX1	Q9UKY1	873 aa	Predicted RBP	28.73	■■■□□ 2.19
RELA-223	ENST00000534283	ADCY6	O43306	1168 aa		28.72	■■■□□ 2.19
RELA-223	ENST00000534283	RANBP6	O60518	1105 aa	Known RBP	28.72	■■■□□ 2.19
RELA-223	ENST00000534283	DUSP11	O75319	330 aa	Known RBP	28.72	■■■□□ 2.19
RELA-223	ENST00000534283	CNTN2	Q02246	1040 aa		28.72	■■■□□ 2.19
RELA-223	ENST00000534283	ZNF589	Q86UQ0	364 aa	Predicted RBP	28.72	■■■□□ 2.19
RELA-223	ENST00000534283	BAD	Q92934	168 aa		28.72	■■■□□ 2.19
RELA-223	ENST00000534283	ABHD16B	Q9H3Z7	469 aa		28.72	■■■□□ 2.19
RELA-223	ENST00000534283	ACAD9	Q9H845	621 aa		28.72	■■■□□ 2.19
RELA-223	ENST00000534283	PRDM5	Q9NQX1	630 aa	Predicted RBP	28.72	■■■□□ 2.19
RELA-223	ENST00000534283	HOMER2	Q9NSB8	354 aa		28.72	■■■□□ 2.19
RELA-223	ENST00000534283	HSPD1	P10809	573 aa	Known RBP	28.71	■■■□□ 2.19
RELA-223	ENST00000534283	ITGB8	P26012	769 aa		28.71	■■■□□ 2.19
RELA-223	ENST00000534283	ACLY	P53396	1101 aa		28.71	■■■□□ 2.19
RELA-223	ENST00000534283	NMI	Q13287	307 aa	Predicted RBP	28.71	■■■□□ 2.19
RELA-223	ENST00000534283	TKFC	Q3LXA3	575 aa		28.71	■■■□□ 2.19
RELA-223	ENST00000534283	ARMCX2	Q7L311	632 aa		28.71	■■■□□ 2.19
RELA-223	ENST00000534283	A1CF	Q9NQ94	594 aa	Known RBP	28.71	■■■□□ 2.19
RELA-223	ENST00000534283	PRR12	Q9ULL5	1215 aa		28.71	■■■□□ 2.19
RELA-223	ENST00000534283	ZNFX1	Q9P2E3	1918 aa	Known RBP	28.71	■■■□□ 2.19
RELA-223	ENST00000534283	MYADML2	A6NDP7	307 aa		28.7	■■■□□ 2.18
RELA-223	ENST00000534283	POTEB2	H3BUK9	544 aa		28.7	■■■□□ 2.18
RELA-223	ENST00000534283	SNAP25	P60880	206 aa		28.7	■■■□□ 2.18
RELA-223	ENST00000534283	IRX5	P78411	483 aa	Predicted RBP	28.7	■■■□□ 2.18
RELA-223	ENST00000534283	KCNA10	Q16322	511 aa		28.7	■■■□□ 2.18
RELA-223	ENST00000534283	RNF146	Q9NTX7	359 aa		28.7	■■■□□ 2.18
RELA-223	ENST00000534283	SOWAHB	A6NEL2	793 aa		28.69	■■■□□ 2.18
RELA-223	ENST00000534283	IGHD	P01880	384 aa		28.69	■■■□□ 2.18
RELA-223	ENST00000534283	CST5	P28325	142 aa	Predicted RBP	28.69	■■■□□ 2.18
RELA-223	ENST00000534283	SHH	Q15465	462 aa		28.69	■■■□□ 2.18
RELA-223	ENST00000534283	CCDC144B	Q3MJ40	725 aa		28.69	■■■□□ 2.18
RELA-223	ENST00000534283	CCDC144CP	Q8IYA2	1237 aa		28.69	■■■□□ 2.18
RELA-223	ENST00000534283	TRERF1	Q96PN7	1200 aa		28.69	■■■□□ 2.18
RELA-223	ENST00000534283	UPF3A	Q9H1J1	476 aa	Known RBP	28.69	■■■□□ 2.18
RELA-223	ENST00000534283	TCP11L1	Q9NUJ3	509 aa		28.69	■■■□□ 2.18
RELA-223	ENST00000534283	ISY1	Q9ULR0	285 aa	Known RBP	28.69	■■■□□ 2.18
RELA-223	ENST00000534283	ZMYM6	O95789	1325 aa		28.69	■■■□□ 2.18
RELA-223	ENST00000534283	MOXD2P	A6NHM9	499 aa		28.68	■■■□□ 2.18
RELA-223	ENST00000534283	KIAA0355	O15063	1070 aa		28.68	■■■□□ 2.18
RELA-223	ENST00000534283	IK	Q13123	557 aa	Predicted RBP	28.68	■■■□□ 2.18
RELA-223	ENST00000534283	C9orf50	Q5SZB4	431 aa		28.68	■■■□□ 2.18
RELA-223	ENST00000534283	FAM109B	Q6ICB4	259 aa	Predicted RBP	28.68	■■■□□ 2.18
RELA-223	ENST00000534283	ANKRD33	Q7Z3H0	272 aa		28.68	■■■□□ 2.18
RELA-223	ENST00000534283	RWDD1	Q9H446	243 aa	Predicted RBP	28.68	■■■□□ 2.18
RELA-223	ENST00000534283	CTAGE5	O15320	804 aa		28.67	■■■□□ 2.18
RELA-223	ENST00000534283	CLTB	P09497	229 aa		28.67	■■■□□ 2.18
RELA-223	ENST00000534283	GJA9	P57773	515 aa		28.67	■■■□□ 2.18
RELA-223	ENST00000534283	NKX3-2	P78367	333 aa		28.67	■■■□□ 2.18
RELA-223	ENST00000534283	CCDC174	Q6PII3	467 aa		28.67	■■■□□ 2.18
RELA-223	ENST00000534283	BTNL9	Q6UXG8	535 aa		28.67	■■■□□ 2.18
RELA-223	ENST00000534283	PLEKHM2	Q8IWE5	1019 aa		28.67	■■■□□ 2.18
RELA-223	ENST00000534283	DCAF4	Q8WV16	495 aa		28.67	■■■□□ 2.18
RELA-223	ENST00000534283	TOX2	Q96NM4	488 aa		28.67	■■■□□ 2.18
RELA-223	ENST00000534283	TMEM47	Q9BQJ4	181 aa		28.67	■■■□□ 2.18
RELA-223	ENST00000534283	OSBPL3	Q9H4L5	887 aa		28.67	■■■□□ 2.18
RELA-223	ENST00000534283	SMCHD1	A6NHR9	2005 aa		28.67	■■■□□ 2.18
RELA-223	ENST00000534283	ASTN1	O14525	1302 aa		28.67	■■■□□ 2.18
RELA-223	ENST00000534283	MUM1L1	Q5H9M0	696 aa		28.66	■■■□□ 2.18
RELA-223	ENST00000534283	TTBK2	Q6IQ55	1244 aa		28.66	■■■□□ 2.18
RELA-223	ENST00000534283	B4GALNT3	Q6L9W6	998 aa		28.66	■■■□□ 2.18
RELA-223	ENST00000534283	COL6A3	P12111	3177 aa		28.65	■■■□□ 2.18
RELA-223	ENST00000534283	PQBP1	O60828	265 aa	Known RBP	28.65	■■■□□ 2.18
RELA-223	ENST00000534283	TOP1	P11387	765 aa	Known RBP	28.65	■■■□□ 2.18
RELA-223	ENST00000534283	ALAS1	P13196	640 aa		28.65	■■■□□ 2.18
RELA-223	ENST00000534283	NUCB1	Q02818	461 aa		28.65	■■■□□ 2.18
RELA-223	ENST00000534283	FAAP100	Q0VG06	881 aa		28.65	■■■□□ 2.18
RELA-223	ENST00000534283	CHD1L	Q86WJ1	897 aa		28.65	■■■□□ 2.18
RELA-223	ENST00000534283	NUP133	Q8WUM0	1156 aa		28.65	■■■□□ 2.18
RELA-223	ENST00000534283	YTHDC1	Q96MU7	727 aa	Known RBP	28.65	■■■□□ 2.18
RELA-223	ENST00000534283	RANBP17	Q9H2T7	1088 aa	Known RBP	28.65	■■■□□ 2.18
RELA-223	ENST00000534283	STARD7	Q9NQZ5	370 aa		28.65	■■■□□ 2.18
RELA-223	ENST00000534283	STXBP5L	Q9Y2K9	1186 aa		28.65	■■■□□ 2.18
RELA-223	ENST00000534283	CCDC171	Q6TFL3	1326 aa		28.65	■■■□□ 2.18
RELA-223	ENST00000534283	MYH4	Q9Y623	1939 aa		28.65	■■■□□ 2.18
RELA-223	ENST00000534283	TRIM6-TRIM34	B2RNG4	842 aa		28.64	■■■□□ 2.18
RELA-223	ENST00000534283	SDS	P20132	328 aa		28.64	■■■□□ 2.18
RELA-223	ENST00000534283	CDK7	P50613	346 aa		28.64	■■■□□ 2.18
RELA-223	ENST00000534283	RRP12	Q5JTH9	1297 aa	Known RBP	28.64	■■■□□ 2.18
RELA-223	ENST00000534283	RILPL2	Q969X0	211 aa		28.64	■■■□□ 2.18
RELA-223	ENST00000534283	CYP39A1	Q9NYL5	469 aa		28.64	■■■□□ 2.18
RELA-223	ENST00000534283	MTMR7	Q9Y216	660 aa		28.64	■■■□□ 2.18
RELA-223	ENST00000534283	ELP1	O95163	1332 aa		28.64	■■■□□ 2.17
RELA-223	ENST00000534283	PLXNA1	Q9UIW2	1896 aa		28.63	■■■□□ 2.17
RELA-223	ENST00000534283	ICAM1	P05362	532 aa		28.63	■■■□□ 2.17
RELA-223	ENST00000534283	SLC16A2	P36021	539 aa		28.63	■■■□□ 2.17
RELA-223	ENST00000534283	EPHB4	P54760	987 aa		28.63	■■■□□ 2.17
RELA-223	ENST00000534283	HAND2	P61296	217 aa		28.63	■■■□□ 2.17
RELA-223	ENST00000534283	TOMM22	Q9NS69	142 aa		28.63	■■■□□ 2.17
RELA-223	ENST00000534283	C11orf97	A0A1B0GVM6	126 aa	Predicted RBP	28.62	■■■□□ 2.17

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