RNA–Protein interactions for RNA: ENST00000534106.2

CHMP4A-208, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 5

Gene CHMP4A, Length 370 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-208ENST00000534106 KIF23Q02241 960 aaPredicted RBP4.11□□□□□ -1.75
CHMP4A-208ENST00000534106 PLEKHO1Q53GL0 409 aaPredicted RBP4.11□□□□□ -1.75
CHMP4A-208ENST00000534106 STYK1Q6J9G0 422 aa4.11□□□□□ -1.75
CHMP4A-208ENST00000534106 CBLL1Q75N03 491 aa4.11□□□□□ -1.75
CHMP4A-208ENST00000534106 POU5F2Q8N7G0 328 aa4.11□□□□□ -1.75
CHMP4A-208ENST00000534106 CLEC4MQ9H2X3 399 aaPredicted RBP4.11□□□□□ -1.75
CHMP4A-208ENST00000534106 PAK6Q9NQU5 681 aaPredicted RBP4.11□□□□□ -1.75
CHMP4A-208ENST00000534106 SERPINA10Q9UK55 444 aa4.11□□□□□ -1.75
CHMP4A-208ENST00000534106 WASHC2AQ641Q2 1341 aa4.11□□□□□ -1.75
CHMP4A-208ENST00000534106 LTN1O94822 1766 aa4.11□□□□□ -1.75
CHMP4A-208ENST00000534106 RTL1A6NKG5 1358 aa4.11□□□□□ -1.75
CHMP4A-208ENST00000534106 FLT4P35916 1363 aa4.11□□□□□ -1.75
CHMP4A-208ENST00000534106 TONSLQ96HA7 1378 aa4.11□□□□□ -1.75
CHMP4A-208ENST00000534106 FAM155AB1AL88 458 aaPredicted RBP4.1□□□□□ -1.75
CHMP4A-208ENST00000534106 ABL1P00519 1130 aa4.1□□□□□ -1.75
CHMP4A-208ENST00000534106 A1BGP04217 495 aa4.1□□□□□ -1.75
CHMP4A-208ENST00000534106 IARSP41252 1262 aaKnown RBP4.1□□□□□ -1.75
CHMP4A-208ENST00000534106 EIF5P55010 431 aaKnown RBP4.1□□□□□ -1.75
CHMP4A-208ENST00000534106 FKBP4Q02790 459 aaKnown RBP eCLIP4.1□□□□□ -1.75
CHMP4A-208ENST00000534106 CYP27C1Q4G0S4 372 aa4.1□□□□□ -1.75
CHMP4A-208ENST00000534106 LCE1DQ5T752 114 aa4.1□□□□□ -1.75
CHMP4A-208ENST00000534106 PEAR1Q5VY43 1037 aaPredicted RBP4.1□□□□□ -1.75
CHMP4A-208ENST00000534106 USP48Q86UV5 1035 aa4.1□□□□□ -1.75
CHMP4A-208ENST00000534106 GPC2Q8N158 579 aa4.1□□□□□ -1.75
CHMP4A-208ENST00000534106 STK11IPQ8N1F8 1099 aa4.1□□□□□ -1.75
CHMP4A-208ENST00000534106 MASTLQ96GX5 879 aa4.1□□□□□ -1.75
CHMP4A-208ENST00000534106 PUS7Q96PZ0 661 aaKnown RBP4.1□□□□□ -1.75
CHMP4A-208ENST00000534106 SEMA6CQ9H3T2 930 aa4.1□□□□□ -1.75
CHMP4A-208ENST00000534106 LIN7BQ9HAP6 207 aa4.1□□□□□ -1.75
CHMP4A-208ENST00000534106 ZFYVE28Q9HCC9 887 aa4.1□□□□□ -1.75
CHMP4A-208ENST00000534106 CUL9Q8IWT3 2517 aa4.1□□□□□ -1.75
CHMP4A-208ENST00000534106 BRCA2P51587 3418 aa4.09□□□□□ -1.75
CHMP4A-208ENST00000534106 BRCA1P38398 1863 aaKnown RBP4.09□□□□□ -1.75
CHMP4A-208ENST00000534106 MYH14Q7Z406 1995 aaKnown RBP4.09□□□□□ -1.75
CHMP4A-208ENST00000534106 CASP8AP2Q9UKL3 1982 aa4.09□□□□□ -1.75
CHMP4A-208ENST00000534106 COL6A3P12111 3177 aa4.09□□□□□ -1.75
CHMP4A-208ENST00000534106 NPHP1O15259 732 aa4.09□□□□□ -1.75
CHMP4A-208ENST00000534106 CA12O43570 354 aa4.09□□□□□ -1.75
CHMP4A-208ENST00000534106 HSP90AB1P08238 724 aaKnown RBP4.09□□□□□ -1.75
CHMP4A-208ENST00000534106 ITGB5P18084 799 aa4.09□□□□□ -1.75
CHMP4A-208ENST00000534106 EIF6P56537 245 aaKnown RBP4.09□□□□□ -1.75
CHMP4A-208ENST00000534106 HUNKP57058 714 aa4.09□□□□□ -1.75
CHMP4A-208ENST00000534106 COL19A1Q14993 1142 aa4.09□□□□□ -1.75
CHMP4A-208ENST00000534106 PKN1Q16512 942 aa4.09□□□□□ -1.75
CHMP4A-208ENST00000534106 ZNF423Q2M1K9 1284 aa4.09□□□□□ -1.75
CHMP4A-208ENST00000534106 SPRED3Q2MJR0 410 aa4.09□□□□□ -1.75
CHMP4A-208ENST00000534106 CCDC93Q567U6 631 aa4.09□□□□□ -1.75
CHMP4A-208ENST00000534106 ZNF574Q6ZN55 896 aaPredicted RBP4.09□□□□□ -1.75
CHMP4A-208ENST00000534106 NFXL1Q6ZNB6 911 aa4.09□□□□□ -1.75
CHMP4A-208ENST00000534106 CNBD1Q8NA66 436 aa4.09□□□□□ -1.75
CHMP4A-208ENST00000534106 GATA6Q92908 595 aa4.09□□□□□ -1.75
CHMP4A-208ENST00000534106 CSRNP1Q96S65 589 aa4.09□□□□□ -1.75
CHMP4A-208ENST00000534106 SETDB2Q96T68 719 aa4.09□□□□□ -1.75
CHMP4A-208ENST00000534106 PIDD1Q9HB75 910 aa4.09□□□□□ -1.75
CHMP4A-208ENST00000534106 ANO2Q9NQ90 1003 aa4.09□□□□□ -1.75
CHMP4A-208ENST00000534106 FAM105AQ9NUU6 356 aa4.09□□□□□ -1.75
CHMP4A-208ENST00000534106 COL15A1P39059 1388 aa4.09□□□□□ -1.75
CHMP4A-208ENST00000534106 ITGB4P16144 1822 aa4.09□□□□□ -1.76
CHMP4A-208ENST00000534106 ARFGEF1Q9Y6D6 1849 aa4.09□□□□□ -1.76
CHMP4A-208ENST00000534106 RANBP2P49792 3224 aaKnown RBP4.08□□□□□ -1.76
CHMP4A-208ENST00000534106 PRAMEF22A3QJZ6 481 aa4.08□□□□□ -1.76
CHMP4A-208ENST00000534106 RNMTO43148 476 aaKnown RBP4.08□□□□□ -1.76
CHMP4A-208ENST00000534106 KCNQ3O43525 872 aa4.08□□□□□ -1.76
CHMP4A-208ENST00000534106 CAMTA2O94983 1202 aa4.08□□□□□ -1.76
CHMP4A-208ENST00000534106 TBC1D8O95759 1140 aa4.08□□□□□ -1.76
CHMP4A-208ENST00000534106 CTSBP07858 339 aa4.08□□□□□ -1.76
CHMP4A-208ENST00000534106 NPR1P16066 1061 aa4.08□□□□□ -1.76
CHMP4A-208ENST00000534106 GRIA4P48058 902 aa4.08□□□□□ -1.76
CHMP4A-208ENST00000534106 GMPSP49915 693 aaPredicted RBP4.08□□□□□ -1.76
CHMP4A-208ENST00000534106 CXCL9Q07325 125 aa4.08□□□□□ -1.76
CHMP4A-208ENST00000534106 BNIP3Q12983 259 aa4.08□□□□□ -1.76
CHMP4A-208ENST00000534106 ZNF124Q15973 351 aa4.08□□□□□ -1.76
CHMP4A-208ENST00000534106 ZNF792Q3KQV3 632 aa4.08□□□□□ -1.76
CHMP4A-208ENST00000534106 C1orf141Q5JVX7 400 aa4.08□□□□□ -1.76
CHMP4A-208ENST00000534106 ZNF648Q5T619 568 aaPredicted RBP4.08□□□□□ -1.76
CHMP4A-208ENST00000534106 SULT6B1Q6IMI4 303 aa4.08□□□□□ -1.76
CHMP4A-208ENST00000534106 OGFOD3Q6PK18 319 aa4.08□□□□□ -1.76
CHMP4A-208ENST00000534106 USP50Q70EL3 339 aaPredicted RBP4.08□□□□□ -1.76
CHMP4A-208ENST00000534106 CTU1Q7Z7A3 348 aaKnown RBP4.08□□□□□ -1.76
CHMP4A-208ENST00000534106 NBPF5PQ86XG9 351 aaPredicted RBP4.08□□□□□ -1.76
CHMP4A-208ENST00000534106 RTKN2Q8IZC4 609 aa4.08□□□□□ -1.76
CHMP4A-208ENST00000534106 SLC17A8Q8NDX2 589 aa4.08□□□□□ -1.76
CHMP4A-208ENST00000534106 BCL7CQ8WUZ0 217 aaPredicted RBP4.08□□□□□ -1.76
CHMP4A-208ENST00000534106 JDP2Q8WYK2 163 aa4.08□□□□□ -1.76
CHMP4A-208ENST00000534106 EHD4Q9H223 541 aa4.08□□□□□ -1.76
CHMP4A-208ENST00000534106 R3HDMLQ9H3Y0 253 aa4.08□□□□□ -1.76
CHMP4A-208ENST00000534106 ACSS3Q9H6R3 686 aa4.08□□□□□ -1.76
CHMP4A-208ENST00000534106 SLC52A2Q9HAB3 445 aa4.08□□□□□ -1.76
CHMP4A-208ENST00000534106 ARID1BQ8NFD5 2236 aaPredicted RBP4.07□□□□□ -1.76
CHMP4A-208ENST00000534106 VIRMAQ69YN4 1812 aaKnown RBP4.07□□□□□ -1.76
CHMP4A-208ENST00000534106 MON2Q7Z3U7 1717 aa4.07□□□□□ -1.76
CHMP4A-208ENST00000534106 COL4A5P29400 1685 aa4.07□□□□□ -1.76
CHMP4A-208ENST00000534106 NCAPD2Q15021 1401 aa4.07□□□□□ -1.76
CHMP4A-208ENST00000534106 A0A087WZG4 1122 aa4.07□□□□□ -1.76
CHMP4A-208ENST00000534106 A0A1W2PP55 124 aa4.07□□□□□ -1.76
CHMP4A-208ENST00000534106 KLRG2A4D1S0 409 aaPredicted RBP4.07□□□□□ -1.76
CHMP4A-208ENST00000534106 ADM5C9JUS6 153 aa4.07□□□□□ -1.76
CHMP4A-208ENST00000534106 FZD6O60353 706 aa4.07□□□□□ -1.76
CHMP4A-208ENST00000534106 RAD17O75943 681 aa4.07□□□□□ -1.76
CHMP4A-208ENST00000534106 FARP2O94887 1054 aaPredicted RBP4.07□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms