RNA–Protein interactions for RNA: ENST00000533059.5

CHID1-222, Transcript of chitinase domain containing 1, humanhuman

TSL 3

Gene CHID1, Length 578 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHID1-222ENST00000533059 NPLOC4Q8TAT6 608 aa16.14■□□□□ 0.17
CHID1-222ENST00000533059 USP6NLQ92738 828 aa16.14■□□□□ 0.17
CHID1-222ENST00000533059 MTA3Q9BTC8 594 aa16.14■□□□□ 0.17
CHID1-222ENST00000533059 UBA5Q9GZZ9 404 aa16.14■□□□□ 0.17
CHID1-222ENST00000533059 UNC93B1Q9H1C4 597 aa16.14■□□□□ 0.17
CHID1-222ENST00000533059 HMX1Q9NP08 348 aaPredicted RBP16.14■□□□□ 0.17
CHID1-222ENST00000533059 RIPK3Q9Y572 518 aa16.14■□□□□ 0.17
CHID1-222ENST00000533059 ZNF236Q9UL36 1845 aa16.14■□□□□ 0.17
CHID1-222ENST00000533059 HTTP42858 3142 aa16.13■□□□□ 0.17
CHID1-222ENST00000533059 POTEFA5A3E0 1075 aa16.13■□□□□ 0.17
CHID1-222ENST00000533059 ICAM1P05362 532 aa16.13■□□□□ 0.17
CHID1-222ENST00000533059 HMGB1P09429 215 aaKnown RBP16.13■□□□□ 0.17
CHID1-222ENST00000533059 HOXC6P09630 235 aa16.13■□□□□ 0.17
CHID1-222ENST00000533059 ANTXR2P58335 489 aa16.13■□□□□ 0.17
CHID1-222ENST00000533059 SYNE3Q6ZMZ3 975 aa16.13■□□□□ 0.17
CHID1-222ENST00000533059 TMTC2Q8N394 836 aa16.13■□□□□ 0.17
CHID1-222ENST00000533059 CTCFLQ8NI51 663 aaPredicted RBP16.13■□□□□ 0.17
CHID1-222ENST00000533059 TRERF1Q96PN7 1200 aa16.13■□□□□ 0.17
CHID1-222ENST00000533059 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.13■□□□□ 0.17
CHID1-222ENST00000533059 SH2B2O14492 632 aaPredicted RBP16.12■□□□□ 0.17
CHID1-222ENST00000533059 PGK2P07205 417 aa16.12■□□□□ 0.17
CHID1-222ENST00000533059 HSPA4P34932 840 aa16.12■□□□□ 0.17
CHID1-222ENST00000533059 TRIM32Q13049 653 aa16.12■□□□□ 0.17
CHID1-222ENST00000533059 CDC37Q16543 378 aaPredicted RBP16.12■□□□□ 0.17
CHID1-222ENST00000533059 ZNF654Q8IZM8 581 aa16.12■□□□□ 0.17
CHID1-222ENST00000533059 LRRC2Q9BYS8 371 aa16.12■□□□□ 0.17
CHID1-222ENST00000533059 LY9Q9HBG7 655 aa16.12■□□□□ 0.17
CHID1-222ENST00000533059 VAT1LQ9HCJ6 419 aa16.12■□□□□ 0.17
CHID1-222ENST00000533059 DOCK3Q8IZD9 2030 aa16.12■□□□□ 0.17
CHID1-222ENST00000533059 ZNF536O15090 1300 aa16.12■□□□□ 0.17
CHID1-222ENST00000533059 RPTORQ8N122 1335 aa16.12■□□□□ 0.17
CHID1-222ENST00000533059 KLRF2D3W0D1 207 aa16.11■□□□□ 0.17
CHID1-222ENST00000533059 EPB41L2O43491 1005 aaKnown RBP16.11■□□□□ 0.17
CHID1-222ENST00000533059 COBLO75128 1261 aa16.11■□□□□ 0.17
CHID1-222ENST00000533059 DDAH1O94760 285 aa16.11■□□□□ 0.17
CHID1-222ENST00000533059 CNGA1P29973 690 aa16.11■□□□□ 0.17
CHID1-222ENST00000533059 KIF5BP33176 963 aa16.11■□□□□ 0.17
CHID1-222ENST00000533059 GRM4Q14833 912 aa16.11■□□□□ 0.17
CHID1-222ENST00000533059 USH1GQ495M9 461 aa16.11■□□□□ 0.17
CHID1-222ENST00000533059 OLFML2BQ68BL8 750 aa16.11■□□□□ 0.17
CHID1-222ENST00000533059 BLOC1S2Q6QNY1 142 aa16.11■□□□□ 0.17
CHID1-222ENST00000533059 NSMFQ6X4W1 530 aa16.11■□□□□ 0.17
CHID1-222ENST00000533059 RASEFQ8IZ41 740 aa16.11■□□□□ 0.17
CHID1-222ENST00000533059 ADGRF4Q8IZF3 695 aa16.11■□□□□ 0.17
CHID1-222ENST00000533059 IGDCC4Q8TDY8 1250 aa16.11■□□□□ 0.17
CHID1-222ENST00000533059 MAML3Q96JK9 1138 aa16.11■□□□□ 0.17
CHID1-222ENST00000533059 JAKMIP1Q96N16 626 aaKnown RBP16.11■□□□□ 0.17
CHID1-222ENST00000533059 CPVLQ9H3G5 476 aa16.11■□□□□ 0.17
CHID1-222ENST00000533059 SLC12A7Q9Y666 1083 aa16.11■□□□□ 0.17
CHID1-222ENST00000533059 PFASO15067 1338 aa16.11■□□□□ 0.17
CHID1-222ENST00000533059 POTEB2H3BUK9 544 aa16.1■□□□□ 0.17
CHID1-222ENST00000533059 GJB1P08034 283 aa16.1■□□□□ 0.17
CHID1-222ENST00000533059 CALM1P0DP23 149 aa16.1■□□□□ 0.17
CHID1-222ENST00000533059 CALM2P0DP24 149 aa16.1■□□□□ 0.17
CHID1-222ENST00000533059 CALM3P0DP25 149 aa16.1■□□□□ 0.17
CHID1-222ENST00000533059 EN2P19622 333 aaPredicted RBP16.1■□□□□ 0.17
CHID1-222ENST00000533059 PSMA5P28066 241 aa16.1■□□□□ 0.17
CHID1-222ENST00000533059 CYP2C19P33261 490 aa16.1■□□□□ 0.17
CHID1-222ENST00000533059 CACNB2Q08289 660 aaPredicted RBP16.1■□□□□ 0.17
CHID1-222ENST00000533059 ADCK5Q3MIX3 580 aa16.1■□□□□ 0.17
CHID1-222ENST00000533059 TSGA10IPQ3SY00 556 aa16.1■□□□□ 0.17
CHID1-222ENST00000533059 DHX32Q7L7V1 743 aaKnown RBP16.1■□□□□ 0.17
CHID1-222ENST00000533059 DEFB118Q96PH6 123 aa16.1■□□□□ 0.17
CHID1-222ENST00000533059 MYL10Q9BUA6 226 aa16.1■□□□□ 0.17
CHID1-222ENST00000533059 SENP2Q9HC62 589 aa16.1■□□□□ 0.17
CHID1-222ENST00000533059 FLRT1Q9NZU1 646 aa16.1■□□□□ 0.17
CHID1-222ENST00000533059 NAP1L2Q9ULW6 460 aaPredicted RBP16.1■□□□□ 0.17
CHID1-222ENST00000533059 DIS3Q9Y2L1 958 aaKnown RBP16.1■□□□□ 0.17
CHID1-222ENST00000533059 SNX14Q9Y5W7 946 aa16.1■□□□□ 0.17
CHID1-222ENST00000533059 WDR19Q8NEZ3 1342 aa16.1■□□□□ 0.17
CHID1-222ENST00000533059 TFRCP02786 760 aaKnown RBP16.09■□□□□ 0.17
CHID1-222ENST00000533059 TAL1P17542 331 aaPredicted RBP16.09■□□□□ 0.17
CHID1-222ENST00000533059 LIFRP42702 1097 aa16.09■□□□□ 0.17
CHID1-222ENST00000533059 GJA8P48165 433 aa16.09■□□□□ 0.17
CHID1-222ENST00000533059 MLLT1Q03111 559 aaPredicted RBP16.09■□□□□ 0.17
CHID1-222ENST00000533059 HOMER1Q86YM7 354 aa16.09■□□□□ 0.17
CHID1-222ENST00000533059 STAG2Q8N3U4 1231 aa16.09■□□□□ 0.17
CHID1-222ENST00000533059 U2AF1L4Q8WU68 220 aaKnown RBP16.09■□□□□ 0.17
CHID1-222ENST00000533059 TCEANC2Q96MN5 208 aa16.09■□□□□ 0.17
CHID1-222ENST00000533059 A1CFQ9NQ94 594 aaKnown RBP16.09■□□□□ 0.17
CHID1-222ENST00000533059 GPHNQ9NQX3 736 aaPredicted RBP16.09■□□□□ 0.17
CHID1-222ENST00000533059 MAD2L2Q9UI95 211 aa16.09■□□□□ 0.17
CHID1-222ENST00000533059 PTPDC1A2A3K4 754 aa16.08■□□□□ 0.16
CHID1-222ENST00000533059 PALM3A6NDB9 673 aaPredicted RBP16.08■□□□□ 0.16
CHID1-222ENST00000533059 CASTP20810 708 aaKnown RBP16.08■□□□□ 0.16
CHID1-222ENST00000533059 GNAQP50148 359 aa16.08■□□□□ 0.16
CHID1-222ENST00000533059 TROAPQ12815 778 aa16.08■□□□□ 0.16
CHID1-222ENST00000533059 ZNF792Q3KQV3 632 aa16.08■□□□□ 0.16
CHID1-222ENST00000533059 MUM1L1Q5H9M0 696 aa16.08■□□□□ 0.16
CHID1-222ENST00000533059 MICU3Q86XE3 530 aa16.08■□□□□ 0.16
CHID1-222ENST00000533059 FBXO11Q86XK2 927 aa16.08■□□□□ 0.16
CHID1-222ENST00000533059 PAK6Q9NQU5 681 aaPredicted RBP16.08■□□□□ 0.16
CHID1-222ENST00000533059 CNPY2Q9Y2B0 182 aa16.08■□□□□ 0.16
CHID1-222ENST00000533059 ABCB11O95342 1321 aa16.08■□□□□ 0.16
CHID1-222ENST00000533059 SGPL1O95470 568 aa16.07■□□□□ 0.16
CHID1-222ENST00000533059 RXRAP19793 462 aa16.07■□□□□ 0.16
CHID1-222ENST00000533059 CCND3P30281 292 aaPredicted RBP16.07■□□□□ 0.16
CHID1-222ENST00000533059 TRAF1Q13077 416 aa16.07■□□□□ 0.16
CHID1-222ENST00000533059 QRICH1Q2TAL8 776 aa16.07■□□□□ 0.16
CHID1-222ENST00000533059 MAP3K21Q5TCX8 1036 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms