RNA–Protein interactions for RNA: ENST00000532661.5

LTBP3-220, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

TSL 3

Gene LTBP3, Length 748 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-220ENST00000532661 XPNPEP3Q9NQH7 507 aa27.18■■□□□ 1.94
LTBP3-220ENST00000532661 DIAPH3Q9NSV4 1193 aa27.18■■□□□ 1.94
LTBP3-220ENST00000532661 FBXO40Q9UH90 709 aa27.18■■□□□ 1.94
LTBP3-220ENST00000532661 CNPY2Q9Y2B0 182 aa27.18■■□□□ 1.94
LTBP3-220ENST00000532661 PLXNA1Q9UIW2 1896 aa27.18■■□□□ 1.94
LTBP3-220ENST00000532661 SZT2Q5T011 3432 aa27.18■■□□□ 1.94
LTBP3-220ENST00000532661 SOX1O00570 391 aaPredicted RBP27.17■■□□□ 1.94
LTBP3-220ENST00000532661 PGK1P00558 417 aa27.17■■□□□ 1.94
LTBP3-220ENST00000532661 PDE4AP27815 886 aa27.17■■□□□ 1.94
LTBP3-220ENST00000532661 MFAP1P55081 439 aaKnown RBP27.17■■□□□ 1.94
LTBP3-220ENST00000532661 RTP1P59025 263 aa27.17■■□□□ 1.94
LTBP3-220ENST00000532661 CCDC96Q2M329 555 aa27.17■■□□□ 1.94
LTBP3-220ENST00000532661 TTBK2Q6IQ55 1244 aa27.17■■□□□ 1.94
LTBP3-220ENST00000532661 MSL3Q8N5Y2 521 aaKnown RBP27.17■■□□□ 1.94
LTBP3-220ENST00000532661 TCP11L1Q9NUJ3 509 aa27.17■■□□□ 1.94
LTBP3-220ENST00000532661 SYNGAP1Q96PV0 1343 aa27.16■■□□□ 1.94
LTBP3-220ENST00000532661 AKR1A1P14550 325 aa27.16■■□□□ 1.94
LTBP3-220ENST00000532661 SLC16A2P36021 539 aa27.16■■□□□ 1.94
LTBP3-220ENST00000532661 SLC39A5Q6ZMH5 540 aa27.16■■□□□ 1.94
LTBP3-220ENST00000532661 MFSD6Q6ZSS7 791 aa27.16■■□□□ 1.94
LTBP3-220ENST00000532661 DCAF4Q8WV16 495 aa27.16■■□□□ 1.94
LTBP3-220ENST00000532661 RNF146Q9NTX7 359 aa27.16■■□□□ 1.94
LTBP3-220ENST00000532661 ZHX1Q9UKY1 873 aaPredicted RBP27.16■■□□□ 1.94
LTBP3-220ENST00000532661 ATP11BQ9Y2G3 1177 aa27.16■■□□□ 1.94
LTBP3-220ENST00000532661 TOP1P11387 765 aaKnown RBP27.15■■□□□ 1.94
LTBP3-220ENST00000532661 ALAS1P13196 640 aa27.15■■□□□ 1.94
LTBP3-220ENST00000532661 MDM2Q00987 491 aaPredicted RBP27.15■■□□□ 1.94
LTBP3-220ENST00000532661 CNTN2Q02246 1040 aa27.15■■□□□ 1.94
LTBP3-220ENST00000532661 ZNF467Q7Z7K2 595 aaPredicted RBP27.15■■□□□ 1.94
LTBP3-220ENST00000532661 ACAD9Q9H845 621 aa27.15■■□□□ 1.94
LTBP3-220ENST00000532661 NEDD4P46934 1319 aa27.15■■□□□ 1.94
LTBP3-220ENST00000532661 SMCHD1A6NHR9 2005 aa27.14■■□□□ 1.94
LTBP3-220ENST00000532661 TRERF1Q96PN7 1200 aa27.14■■□□□ 1.94
LTBP3-220ENST00000532661 A1CFQ9NQ94 594 aaKnown RBP27.14■■□□□ 1.94
LTBP3-220ENST00000532661 CDKN2AIPQ9NXV6 580 aaPredicted RBP27.14■■□□□ 1.94
LTBP3-220ENST00000532661 FRMPD2Q68DX3 1309 aaPredicted RBP27.14■■□□□ 1.93
LTBP3-220ENST00000532661 ZNF213O14771 459 aa27.13■■□□□ 1.93
LTBP3-220ENST00000532661 MUM1L1Q5H9M0 696 aa27.13■■□□□ 1.93
LTBP3-220ENST00000532661 UBE2OQ9C0C9 1292 aaKnown RBP27.13■■□□□ 1.93
LTBP3-220ENST00000532661 GPCPD1Q9NPB8 672 aa27.13■■□□□ 1.93
LTBP3-220ENST00000532661 FAM184BQ9ULE4 1060 aa27.13■■□□□ 1.93
LTBP3-220ENST00000532661 POTEB2H3BUK9 544 aa27.12■■□□□ 1.93
LTBP3-220ENST00000532661 HIP1O00291 1037 aa27.12■■□□□ 1.93
LTBP3-220ENST00000532661 ACVR2BQ13705 512 aa27.12■■□□□ 1.93
LTBP3-220ENST00000532661 TKFCQ3LXA3 575 aa27.12■■□□□ 1.93
LTBP3-220ENST00000532661 TRIM60Q495X7 471 aa27.12■■□□□ 1.93
LTBP3-220ENST00000532661 RNF180Q86T96 592 aa27.12■■□□□ 1.93
LTBP3-220ENST00000532661 FAM133AQ8N9E0 248 aa27.12■■□□□ 1.93
LTBP3-220ENST00000532661 LRCH3Q96II8 777 aa27.12■■□□□ 1.93
LTBP3-220ENST00000532661 ZKSCAN3Q9BRR0 538 aa27.12■■□□□ 1.93
LTBP3-220ENST00000532661 IL25Q9H293 177 aa27.12■■□□□ 1.93
LTBP3-220ENST00000532661 PHF24Q9UPV7 400 aa27.12■■□□□ 1.93
LTBP3-220ENST00000532661 LAMA3Q16787 3333 aa27.11■■□□□ 1.93
LTBP3-220ENST00000532661 SOWAHBA6NEL2 793 aa27.11■■□□□ 1.93
LTBP3-220ENST00000532661 ADAMTS4O75173 837 aa27.11■■□□□ 1.93
LTBP3-220ENST00000532661 PCP11498 1178 aaKnown RBP27.11■■□□□ 1.93
LTBP3-220ENST00000532661 GSPT1P15170 499 aaKnown RBP27.11■■□□□ 1.93
LTBP3-220ENST00000532661 BTNL9Q6UXG8 535 aa27.11■■□□□ 1.93
LTBP3-220ENST00000532661 ARMCX2Q7L311 632 aa27.11■■□□□ 1.93
LTBP3-220ENST00000532661 CCDC144CPQ8IYA2 1237 aa27.11■■□□□ 1.93
LTBP3-220ENST00000532661 RANBP17Q9H2T7 1088 aaKnown RBP27.11■■□□□ 1.93
LTBP3-220ENST00000532661 RNF41Q9H4P4 317 aaPredicted RBP27.11■■□□□ 1.93
LTBP3-220ENST00000532661 ADCY6O43306 1168 aa27.1■■□□□ 1.93
LTBP3-220ENST00000532661 PDHBP11177 359 aa27.1■■□□□ 1.93
LTBP3-220ENST00000532661 IRX5P78411 483 aaPredicted RBP27.1■■□□□ 1.93
LTBP3-220ENST00000532661 SNX17Q15036 470 aa27.1■■□□□ 1.93
LTBP3-220ENST00000532661 SYDE2Q5VT97 1194 aa27.1■■□□□ 1.93
LTBP3-220ENST00000532661 TTC14Q96N46 770 aa27.1■■□□□ 1.93
LTBP3-220ENST00000532661 CCPG1Q9ULG6 757 aa27.1■■□□□ 1.93
LTBP3-220ENST00000532661 DDX49Q9Y6V7 483 aaKnown RBP27.1■■□□□ 1.93
LTBP3-220ENST00000532661 SYNRGQ9UMZ2 1314 aa27.1■■□□□ 1.93
LTBP3-220ENST00000532661 TDHQ8IZJ6 230 aa27.09■■□□□ 1.93
LTBP3-220ENST00000532661 ESR2Q92731 530 aa27.09■■□□□ 1.93
LTBP3-220ENST00000532661 DSCC1Q9BVC3 393 aa27.09■■□□□ 1.93
LTBP3-220ENST00000532661 KATNBL1Q9H079 304 aa27.09■■□□□ 1.93
LTBP3-220ENST00000532661 ABHD16BQ9H3Z7 469 aa27.09■■□□□ 1.93
LTBP3-220ENST00000532661 ICAM1P05362 532 aa27.08■■□□□ 1.93
LTBP3-220ENST00000532661 CCDC144BQ3MJ40 725 aa27.08■■□□□ 1.93
LTBP3-220ENST00000532661 TTC22Q5TAA0 569 aa27.08■■□□□ 1.93
LTBP3-220ENST00000532661 PURBQ96QR8 312 aaKnown RBP27.08■■□□□ 1.93
LTBP3-220ENST00000532661 ASTN1O14525 1302 aa27.08■■□□□ 1.93
LTBP3-220ENST00000532661 A0A1W2PQ45 241 aaPredicted RBP27.07■■□□□ 1.92
LTBP3-220ENST00000532661 A0A1W2PQY0 241 aa27.07■■□□□ 1.92
LTBP3-220ENST00000532661 MYADML2A6NDP7 307 aa27.07■■□□□ 1.92
LTBP3-220ENST00000532661 KDM4AO75164 1064 aa27.07■■□□□ 1.92
LTBP3-220ENST00000532661 ZNF543Q08ER8 600 aa27.07■■□□□ 1.92
LTBP3-220ENST00000532661 KLHDC9Q8NEP7 349 aa27.07■■□□□ 1.92
LTBP3-220ENST00000532661 PRDM5Q9NQX1 630 aaPredicted RBP27.07■■□□□ 1.92
LTBP3-220ENST00000532661 CYP39A1Q9NYL5 469 aa27.07■■□□□ 1.92
LTBP3-220ENST00000532661 PRKAG2Q9UGJ0 569 aa27.07■■□□□ 1.92
LTBP3-220ENST00000532661 B4E1Z4 1266 aa27.06■■□□□ 1.92
LTBP3-220ENST00000532661 DUSP11O75319 330 aaKnown RBP27.06■■□□□ 1.92
LTBP3-220ENST00000532661 SNHG28P0DPA3 235 aa27.06■■□□□ 1.92
LTBP3-220ENST00000532661 TLE2Q04725 743 aa27.06■■□□□ 1.92
LTBP3-220ENST00000532661 NSMFQ6X4W1 530 aa27.06■■□□□ 1.92
LTBP3-220ENST00000532661 SH3RF1Q7Z6J0 888 aa27.06■■□□□ 1.92
LTBP3-220ENST00000532661 LBHD1Q9BQE6 289 aaPredicted RBP27.06■■□□□ 1.92
LTBP3-220ENST00000532661 ACLYP53396 1101 aa27.05■■□□□ 1.92
LTBP3-220ENST00000532661 KCNA10Q16322 511 aa27.05■■□□□ 1.92
LTBP3-220ENST00000532661 C1orf53Q5VUE5 145 aa27.05■■□□□ 1.92
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms