RNA–Protein interactions for RNA: ENST00000530990.1

LTBP3-219, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

TSL 2

Gene LTBP3, Length 531 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-219ENST00000530990 MCM3APO60318 1980 aa13.87□□□□□ -0.19
LTBP3-219ENST00000530990 STRNO43815 780 aa13.87□□□□□ -0.19
LTBP3-219ENST00000530990 INHAP05111 366 aa13.87□□□□□ -0.19
LTBP3-219ENST00000530990 FCER1AP12319 257 aa13.87□□□□□ -0.19
LTBP3-219ENST00000530990 XRCC5P13010 732 aaKnown RBP13.87□□□□□ -0.19
LTBP3-219ENST00000530990 CPA1P15085 419 aa13.87□□□□□ -0.19
LTBP3-219ENST00000530990 SOX10P56693 466 aa13.87□□□□□ -0.19
LTBP3-219ENST00000530990 TROAPQ12815 778 aa13.87□□□□□ -0.19
LTBP3-219ENST00000530990 GRM4Q14833 912 aa13.87□□□□□ -0.19
LTBP3-219ENST00000530990 CCL14Q16627 93 aa13.87□□□□□ -0.19
LTBP3-219ENST00000530990 NBPF11Q86T75 865 aa13.87□□□□□ -0.19
LTBP3-219ENST00000530990 ZNF654Q8IZM8 581 aa13.87□□□□□ -0.19
LTBP3-219ENST00000530990 ABRAQ8N0Z2 381 aa13.87□□□□□ -0.19
LTBP3-219ENST00000530990 NPLOC4Q8TAT6 608 aa13.87□□□□□ -0.19
LTBP3-219ENST00000530990 JAKMIP1Q96N16 626 aaKnown RBP13.87□□□□□ -0.19
LTBP3-219ENST00000530990 MMP19Q99542 508 aa13.87□□□□□ -0.19
LTBP3-219ENST00000530990 HOMER2Q9NSB8 354 aa13.87□□□□□ -0.19
LTBP3-219ENST00000530990 BIN2Q9UBW5 565 aaPredicted RBP13.87□□□□□ -0.19
LTBP3-219ENST00000530990 MAD2L2Q9UI95 211 aa13.87□□□□□ -0.19
LTBP3-219ENST00000530990 WDR19Q8NEZ3 1342 aa13.87□□□□□ -0.19
LTBP3-219ENST00000530990 BAZ2BQ9UIF8 2168 aaKnown RBP13.86□□□□□ -0.19
LTBP3-219ENST00000530990 COBLO75128 1261 aa13.86□□□□□ -0.19
LTBP3-219ENST00000530990 DDAH1O94760 285 aa13.86□□□□□ -0.19
LTBP3-219ENST00000530990 HMGCRP04035 888 aa13.86□□□□□ -0.19
LTBP3-219ENST00000530990 ICAM1P05362 532 aa13.86□□□□□ -0.19
LTBP3-219ENST00000530990 ALAS1P13196 640 aa13.86□□□□□ -0.19
LTBP3-219ENST00000530990 LIFRP42702 1097 aa13.86□□□□□ -0.19
LTBP3-219ENST00000530990 EXOSC10Q01780 885 aaKnown RBP13.86□□□□□ -0.19
LTBP3-219ENST00000530990 TRIM32Q13049 653 aa13.86□□□□□ -0.19
LTBP3-219ENST00000530990 KCTD2Q14681 263 aa13.86□□□□□ -0.19
LTBP3-219ENST00000530990 MTFR1Q15390 333 aa13.86□□□□□ -0.19
LTBP3-219ENST00000530990 NFXL1Q6ZNB6 911 aa13.86□□□□□ -0.19
LTBP3-219ENST00000530990 DHX32Q7L7V1 743 aaKnown RBP13.86□□□□□ -0.19
LTBP3-219ENST00000530990 CATIPQ7Z7H3 387 aa13.86□□□□□ -0.19
LTBP3-219ENST00000530990 ADGRF4Q8IZF3 695 aa13.86□□□□□ -0.19
LTBP3-219ENST00000530990 NUP133Q8WUM0 1156 aa13.86□□□□□ -0.19
LTBP3-219ENST00000530990 RNF146Q9NTX7 359 aa13.86□□□□□ -0.19
LTBP3-219ENST00000530990 FLRT1Q9NZU1 646 aa13.86□□□□□ -0.19
LTBP3-219ENST00000530990 CCPG1Q9ULG6 757 aa13.86□□□□□ -0.19
LTBP3-219ENST00000530990 LRRC37A2A6NM11 1700 aa13.86□□□□□ -0.19
LTBP3-219ENST00000530990 PALM3A6NDB9 673 aaPredicted RBP13.85□□□□□ -0.19
LTBP3-219ENST00000530990 CCDC69A6NI79 296 aa13.85□□□□□ -0.19
LTBP3-219ENST00000530990 KLRF2D3W0D1 207 aa13.85□□□□□ -0.19
LTBP3-219ENST00000530990 DHX16O60231 1041 aaKnown RBP13.85□□□□□ -0.19
LTBP3-219ENST00000530990 PGK2P07205 417 aa13.85□□□□□ -0.19
LTBP3-219ENST00000530990 HMGB1P09429 215 aaKnown RBP13.85□□□□□ -0.19
LTBP3-219ENST00000530990 HOXC6P09630 235 aa13.85□□□□□ -0.19
LTBP3-219ENST00000530990 UBXN2AP68543 259 aa13.85□□□□□ -0.19
LTBP3-219ENST00000530990 CDC37Q16543 378 aaPredicted RBP13.85□□□□□ -0.19
LTBP3-219ENST00000530990 MUM1L1Q5H9M0 696 aa13.85□□□□□ -0.19
LTBP3-219ENST00000530990 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.85□□□□□ -0.19
LTBP3-219ENST00000530990 DPP9Q86TI2 863 aa13.85□□□□□ -0.19
LTBP3-219ENST00000530990 RAB11FIP4Q86YS3 637 aa13.85□□□□□ -0.19
LTBP3-219ENST00000530990 CHST13Q8NET6 341 aa13.85□□□□□ -0.19
LTBP3-219ENST00000530990 ACAD9Q9H845 621 aa13.85□□□□□ -0.19
LTBP3-219ENST00000530990 RXRAP19793 462 aa13.84□□□□□ -0.19
LTBP3-219ENST00000530990 CASTP20810 708 aaKnown RBP13.84□□□□□ -0.19
LTBP3-219ENST00000530990 SLC35G1Q2M3R5 365 aa13.84□□□□□ -0.19
LTBP3-219ENST00000530990 TKFCQ3LXA3 575 aa13.84□□□□□ -0.19
LTBP3-219ENST00000530990 C8orf34Q49A92 452 aa13.84□□□□□ -0.19
LTBP3-219ENST00000530990 BLOC1S2Q6QNY1 142 aa13.84□□□□□ -0.19
LTBP3-219ENST00000530990 SGMS1Q86VZ5 419 aa13.84□□□□□ -0.19
LTBP3-219ENST00000530990 TMTC2Q8N394 836 aa13.84□□□□□ -0.19
LTBP3-219ENST00000530990 TRERF1Q96PN7 1200 aa13.84□□□□□ -0.19
LTBP3-219ENST00000530990 UNC93B1Q9H1C4 597 aa13.84□□□□□ -0.19
LTBP3-219ENST00000530990 JMJD4Q9H9V9 463 aa13.84□□□□□ -0.19
LTBP3-219ENST00000530990 FBXO40Q9UH90 709 aa13.84□□□□□ -0.19
LTBP3-219ENST00000530990 GTF3C3Q9Y5Q9 886 aa13.84□□□□□ -0.19
LTBP3-219ENST00000530990 TNRC18O15417 2968 aaPredicted RBP13.84□□□□□ -0.19
LTBP3-219ENST00000530990 KIAA0100Q14667 2235 aaKnown RBP13.83□□□□□ -0.2
LTBP3-219ENST00000530990 POTEFA5A3E0 1075 aa13.83□□□□□ -0.2
LTBP3-219ENST00000530990 SEC24BO95487 1268 aa13.83□□□□□ -0.2
LTBP3-219ENST00000530990 CCL5P13501 91 aa13.83□□□□□ -0.2
LTBP3-219ENST00000530990 PRKAR2AP13861 404 aaKnown RBP13.83□□□□□ -0.2
LTBP3-219ENST00000530990 RPS6KB1P23443 525 aa13.83□□□□□ -0.2
LTBP3-219ENST00000530990 QRICH1Q2TAL8 776 aa13.83□□□□□ -0.2
LTBP3-219ENST00000530990 APOA5Q6Q788 366 aa13.83□□□□□ -0.2
LTBP3-219ENST00000530990 MICU3Q86XE3 530 aa13.83□□□□□ -0.2
LTBP3-219ENST00000530990 CCDC144CPQ8IYA2 1237 aa13.83□□□□□ -0.2
LTBP3-219ENST00000530990 TRMT44Q8IYL2 757 aaKnown RBP13.83□□□□□ -0.2
LTBP3-219ENST00000530990 CTCFLQ8NI51 663 aaPredicted RBP13.83□□□□□ -0.2
LTBP3-219ENST00000530990 MAML3Q96JK9 1138 aa13.83□□□□□ -0.2
LTBP3-219ENST00000530990 VAT1LQ9HCJ6 419 aa13.83□□□□□ -0.2
LTBP3-219ENST00000530990 A1CFQ9NQ94 594 aaKnown RBP13.83□□□□□ -0.2
LTBP3-219ENST00000530990 SLC12A7Q9Y666 1083 aa13.83□□□□□ -0.2
LTBP3-219ENST00000530990 DNAJC25-GNG10A0A024R161 153 aa13.82□□□□□ -0.2
LTBP3-219ENST00000530990 NFIBO00712 420 aa13.82□□□□□ -0.2
LTBP3-219ENST00000530990 CYTH3O43739 400 aa13.82□□□□□ -0.2
LTBP3-219ENST00000530990 IGHA2P01877 340 aa13.82□□□□□ -0.2
LTBP3-219ENST00000530990 CALM1P0DP23 149 aa13.82□□□□□ -0.2
LTBP3-219ENST00000530990 CALM2P0DP24 149 aa13.82□□□□□ -0.2
LTBP3-219ENST00000530990 CALM3P0DP25 149 aa13.82□□□□□ -0.2
LTBP3-219ENST00000530990 PSMA5P28066 241 aa13.82□□□□□ -0.2
LTBP3-219ENST00000530990 CACNB2Q08289 660 aaPredicted RBP13.82□□□□□ -0.2
LTBP3-219ENST00000530990 ZNF792Q3KQV3 632 aa13.82□□□□□ -0.2
LTBP3-219ENST00000530990 USH1GQ495M9 461 aa13.82□□□□□ -0.2
LTBP3-219ENST00000530990 MAP3K21Q5TCX8 1036 aa13.82□□□□□ -0.2
LTBP3-219ENST00000530990 OLFML2BQ68BL8 750 aa13.82□□□□□ -0.2
LTBP3-219ENST00000530990 Q6ZUG5 572 aa13.82□□□□□ -0.2
LTBP3-219ENST00000530990 ANKRD35Q8N283 1001 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms