RNA–Protein interactions for RNA: ENST00000523555.5

PABPC1-222, Transcript of poly(A) binding protein cytoplasmic 1, human

TSL 3

Gene PABPC1, Length 522 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PABPC1-222	ENST00000523555	ZNF543	Q08ER8	600 aa		11.19	□□□□□ -0.62
PABPC1-222	ENST00000523555	MFSD14C	Q5VZR4	134 aa		11.19	□□□□□ -0.62
PABPC1-222	ENST00000523555	OLFML2B	Q68BL8	750 aa		11.19	□□□□□ -0.62
PABPC1-222	ENST00000523555	BTNL9	Q6UXG8	535 aa		11.19	□□□□□ -0.62
PABPC1-222	ENST00000523555	DGKH	Q86XP1	1220 aa		11.19	□□□□□ -0.62
PABPC1-222	ENST00000523555	PNMA1	Q8ND90	353 aa		11.19	□□□□□ -0.62
PABPC1-222	ENST00000523555	CHURC1	Q8WUH1	139 aa		11.19	□□□□□ -0.62
PABPC1-222	ENST00000523555	ANKS1A	Q92625	1134 aa		11.19	□□□□□ -0.62
PABPC1-222	ENST00000523555	PAWR	Q96IZ0	340 aa	Known RBP	11.19	□□□□□ -0.62
PABPC1-222	ENST00000523555	RANBP17	Q9H2T7	1088 aa	Known RBP	11.19	□□□□□ -0.62
PABPC1-222	ENST00000523555	OGDHL	Q9ULD0	1010 aa		11.19	□□□□□ -0.62
PABPC1-222	ENST00000523555	DDX49	Q9Y6V7	483 aa	Known RBP	11.19	□□□□□ -0.62
PABPC1-222	ENST00000523555		U3KPZ7	1027 aa	Predicted RBP	11.19	□□□□□ -0.62
PABPC1-222	ENST00000523555	ASTN1	O14525	1302 aa		11.18	□□□□□ -0.62
PABPC1-222	ENST00000523555	ALAS1	P13196	640 aa		11.18	□□□□□ -0.62
PABPC1-222	ENST00000523555	CNGA1	P29973	690 aa		11.18	□□□□□ -0.62
PABPC1-222	ENST00000523555	OAZ1	P54368	228 aa		11.18	□□□□□ -0.62
PABPC1-222	ENST00000523555	ANTXR2	P58335	489 aa		11.18	□□□□□ -0.62
PABPC1-222	ENST00000523555	KCTD2	Q14681	263 aa		11.18	□□□□□ -0.62
PABPC1-222	ENST00000523555	SYDE2	Q5VT97	1194 aa		11.18	□□□□□ -0.62
PABPC1-222	ENST00000523555	DHX30	Q7L2E3	1194 aa	Known RBP eCLIP	11.18	□□□□□ -0.62
PABPC1-222	ENST00000523555	IQCA1	Q86XH1	822 aa		11.18	□□□□□ -0.62
PABPC1-222	ENST00000523555	PURB	Q96QR8	312 aa	Known RBP	11.18	□□□□□ -0.62
PABPC1-222	ENST00000523555	KRT23	Q9C075	422 aa		11.18	□□□□□ -0.62
PABPC1-222	ENST00000523555	UBA5	Q9GZZ9	404 aa		11.18	□□□□□ -0.62
PABPC1-222	ENST00000523555	CNNM2	Q9H8M5	875 aa		11.18	□□□□□ -0.62
PABPC1-222	ENST00000523555	GPHN	Q9NQX3	736 aa	Predicted RBP	11.18	□□□□□ -0.62
PABPC1-222	ENST00000523555	RNF146	Q9NTX7	359 aa		11.18	□□□□□ -0.62
PABPC1-222	ENST00000523555	CTDP1	Q9Y5B0	961 aa	Predicted RBP	11.18	□□□□□ -0.62
PABPC1-222	ENST00000523555	PFAS	O15067	1338 aa		11.17	□□□□□ -0.62
PABPC1-222	ENST00000523555	COPB2	P35606	906 aa		11.17	□□□□□ -0.62
PABPC1-222	ENST00000523555	CNTN2	Q02246	1040 aa		11.17	□□□□□ -0.62
PABPC1-222	ENST00000523555	MB21D2	Q8IYB1	491 aa	Predicted RBP	11.17	□□□□□ -0.62
PABPC1-222	ENST00000523555	STAG2	Q8N3U4	1231 aa		11.17	□□□□□ -0.62
PABPC1-222	ENST00000523555	CHST13	Q8NET6	341 aa		11.17	□□□□□ -0.62
PABPC1-222	ENST00000523555	LENG1	Q96BZ8	264 aa	Predicted RBP	11.17	□□□□□ -0.62
PABPC1-222	ENST00000523555	TRERF1	Q96PN7	1200 aa		11.17	□□□□□ -0.62
PABPC1-222	ENST00000523555	TINF2	Q9BSI4	451 aa		11.17	□□□□□ -0.62
PABPC1-222	ENST00000523555	ACAD9	Q9H845	621 aa		11.17	□□□□□ -0.62
PABPC1-222	ENST00000523555	KAT14	Q9H8E8	782 aa		11.17	□□□□□ -0.62
PABPC1-222	ENST00000523555	A1CF	Q9NQ94	594 aa	Known RBP	11.17	□□□□□ -0.62
PABPC1-222	ENST00000523555	DDX20	Q9UHI6	824 aa	Known RBP	11.17	□□□□□ -0.62
PABPC1-222	ENST00000523555	SOWAHB	A6NEL2	793 aa		11.16	□□□□□ -0.62
PABPC1-222	ENST00000523555	NFIB	O00712	420 aa		11.16	□□□□□ -0.62
PABPC1-222	ENST00000523555	SLC27A2	O14975	620 aa		11.16	□□□□□ -0.62
PABPC1-222	ENST00000523555	SNAI1	O95863	264 aa	Predicted RBP	11.16	□□□□□ -0.62
PABPC1-222	ENST00000523555	ICAM1	P05362	532 aa		11.16	□□□□□ -0.62
PABPC1-222	ENST00000523555	NEFL	P07196	543 aa		11.16	□□□□□ -0.62
PABPC1-222	ENST00000523555	ZNF865	P0CJ78	1059 aa	Predicted RBP	11.16	□□□□□ -0.62
PABPC1-222	ENST00000523555	FDX1	P10109	184 aa		11.16	□□□□□ -0.62
PABPC1-222	ENST00000523555	NECTIN1	Q15223	517 aa		11.16	□□□□□ -0.62
PABPC1-222	ENST00000523555	SLC35G1	Q2M3R5	365 aa		11.16	□□□□□ -0.62
PABPC1-222	ENST00000523555	IFIT1B	Q5T764	474 aa	Known RBP	11.16	□□□□□ -0.62
PABPC1-222	ENST00000523555	ANKRD35	Q8N283	1001 aa		11.16	□□□□□ -0.62
PABPC1-222	ENST00000523555	DDX11	Q96FC9	970 aa		11.16	□□□□□ -0.62
PABPC1-222	ENST00000523555	UBAC1	Q9BSL1	405 aa		11.16	□□□□□ -0.62
PABPC1-222	ENST00000523555	ANO2	Q9NQ90	1003 aa		11.16	□□□□□ -0.62
PABPC1-222	ENST00000523555	CCPG1	Q9ULG6	757 aa		11.16	□□□□□ -0.62
PABPC1-222	ENST00000523555	DIS3	Q9Y2L1	958 aa	Known RBP	11.16	□□□□□ -0.62
PABPC1-222	ENST00000523555	ADCY6	O43306	1168 aa		11.15	□□□□□ -0.62
PABPC1-222	ENST00000523555	CDC45	O75419	566 aa		11.15	□□□□□ -0.62
PABPC1-222	ENST00000523555	PTGS1	P23219	599 aa		11.15	□□□□□ -0.62
PABPC1-222	ENST00000523555	IRX5	P78411	483 aa	Predicted RBP	11.15	□□□□□ -0.62
PABPC1-222	ENST00000523555	PRPF38B	Q5VTL8	546 aa	Known RBP	11.15	□□□□□ -0.62
PABPC1-222	ENST00000523555	CREB3L3	Q68CJ9	461 aa		11.15	□□□□□ -0.62
PABPC1-222	ENST00000523555	ADGRF4	Q8IZF3	695 aa		11.15	□□□□□ -0.62
PABPC1-222	ENST00000523555	FAM133A	Q8N9E0	248 aa		11.15	□□□□□ -0.62
PABPC1-222	ENST00000523555	ANKLE1	Q8NAG6	615 aa		11.15	□□□□□ -0.62
PABPC1-222	ENST00000523555	NCOA7	Q8NI08	942 aa		11.15	□□□□□ -0.62
PABPC1-222	ENST00000523555	CLEC4D	Q8WXI8	215 aa		11.15	□□□□□ -0.62
PABPC1-222	ENST00000523555	SLC5A4	Q9NY91	659 aa		11.15	□□□□□ -0.62
PABPC1-222	ENST00000523555	MAD2L2	Q9UI95	211 aa		11.15	□□□□□ -0.62
PABPC1-222	ENST00000523555	CEP290	O15078	2479 aa		11.14	□□□□□ -0.63
PABPC1-222	ENST00000523555	RANBP2	P49792	3224 aa	Known RBP	11.14	□□□□□ -0.63
PABPC1-222	ENST00000523555	IFIT3	O14879	490 aa	Known RBP	11.14	□□□□□ -0.63
PABPC1-222	ENST00000523555	SEPT4	O43236	478 aa		11.14	□□□□□ -0.63
PABPC1-222	ENST00000523555	COL6A1	P12109	1028 aa		11.14	□□□□□ -0.63
PABPC1-222	ENST00000523555	NT5C2	P49902	561 aa		11.14	□□□□□ -0.63
PABPC1-222	ENST00000523555	TRDN	Q13061	729 aa		11.14	□□□□□ -0.63
PABPC1-222	ENST00000523555	USH1G	Q495M9	461 aa		11.14	□□□□□ -0.63
PABPC1-222	ENST00000523555	CCDC178	Q5BJE1	867 aa		11.14	□□□□□ -0.63
PABPC1-222	ENST00000523555	GPATCH4	Q5T3I0	446 aa	Known RBP	11.14	□□□□□ -0.63
PABPC1-222	ENST00000523555	GJC2	Q5T442	439 aa	Predicted RBP	11.14	□□□□□ -0.63
PABPC1-222	ENST00000523555	MAMDC4	Q6UXC1	1216 aa		11.14	□□□□□ -0.63
PABPC1-222	ENST00000523555	NSMF	Q6X4W1	530 aa		11.14	□□□□□ -0.63
PABPC1-222	ENST00000523555	SLC30A10	Q6XR72	485 aa		11.14	□□□□□ -0.63
PABPC1-222	ENST00000523555	KIAA1211	Q6ZU35	1233 aa		11.14	□□□□□ -0.63
PABPC1-222	ENST00000523555	NECAB2	Q7Z6G3	386 aa		11.14	□□□□□ -0.63
PABPC1-222	ENST00000523555	RALYL	Q86SE5	291 aa	Known RBP	11.14	□□□□□ -0.63
PABPC1-222	ENST00000523555	IGDCC4	Q8TDY8	1250 aa		11.14	□□□□□ -0.63
PABPC1-222	ENST00000523555	DPF3	Q92784	378 aa		11.14	□□□□□ -0.63
PABPC1-222	ENST00000523555	LRRC2	Q9BYS8	371 aa		11.14	□□□□□ -0.63
PABPC1-222	ENST00000523555	KATNBL1	Q9H079	304 aa		11.14	□□□□□ -0.63
PABPC1-222	ENST00000523555	C11orf49	Q9H6J7	331 aa		11.14	□□□□□ -0.63
PABPC1-222	ENST00000523555	CYP39A1	Q9NYL5	469 aa		11.14	□□□□□ -0.63
PABPC1-222	ENST00000523555	FBXO40	Q9UH90	709 aa		11.14	□□□□□ -0.63
PABPC1-222	ENST00000523555	SYNGAP1	Q96PV0	1343 aa		11.13	□□□□□ -0.63
PABPC1-222	ENST00000523555		H0YGN5	161 aa		11.13	□□□□□ -0.63
PABPC1-222	ENST00000523555	POTEB2	H3BUK9	544 aa		11.13	□□□□□ -0.63
PABPC1-222	ENST00000523555	PARP1	P09874	1014 aa	Known RBP	11.13	□□□□□ -0.63

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