RNA–Protein interactions for RNA: ENST00000522243.5

SDCBP-209, Transcript of syndecan binding protein, humanhuman

TSL 5

Gene SDCBP, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-209ENST00000522243 MFAP1P55081 439 aaKnown RBP24.44■■□□□ 1.5
SDCBP-209ENST00000522243 MDM2Q00987 491 aaPredicted RBP24.44■■□□□ 1.5
SDCBP-209ENST00000522243 AKNAD1Q5T1N1 836 aa24.44■■□□□ 1.5
SDCBP-209ENST00000522243 SLC39A5Q6ZMH5 540 aa24.44■■□□□ 1.5
SDCBP-209ENST00000522243 MFSD6Q6ZSS7 791 aa24.44■■□□□ 1.5
SDCBP-209ENST00000522243 TBC1D10CQ8IV04 446 aa24.44■■□□□ 1.5
SDCBP-209ENST00000522243 TMEM47Q9BQJ4 181 aa24.44■■□□□ 1.5
SDCBP-209ENST00000522243 RNF146Q9NTX7 359 aa24.44■■□□□ 1.5
SDCBP-209ENST00000522243 ZHX1Q9UKY1 873 aaPredicted RBP24.44■■□□□ 1.5
SDCBP-209ENST00000522243 PRR12Q9ULL5 1215 aa24.44■■□□□ 1.5
SDCBP-209ENST00000522243 ATP11BQ9Y2G3 1177 aa24.44■■□□□ 1.5
SDCBP-209ENST00000522243 SOX1O00570 391 aaPredicted RBP24.43■■□□□ 1.5
SDCBP-209ENST00000522243 PLA2G6O60733 806 aa24.43■■□□□ 1.5
SDCBP-209ENST00000522243 ALAS1P13196 640 aa24.43■■□□□ 1.5
SDCBP-209ENST00000522243 AKR1A1P14550 325 aa24.43■■□□□ 1.5
SDCBP-209ENST00000522243 TTBK2Q6IQ55 1244 aa24.43■■□□□ 1.5
SDCBP-209ENST00000522243 MAMDC4Q6UXC1 1216 aa24.43■■□□□ 1.5
SDCBP-209ENST00000522243 DHX30Q7L2E3 1194 aaKnown RBP eCLIP24.43■■□□□ 1.5
SDCBP-209ENST00000522243 FGD4Q96M96 766 aa24.43■■□□□ 1.5
SDCBP-209ENST00000522243 ACAD9Q9H845 621 aa24.43■■□□□ 1.5
SDCBP-209ENST00000522243 FRMPD2Q68DX3 1309 aaPredicted RBP24.42■■□□□ 1.5
SDCBP-209ENST00000522243 SYNGAP1Q96PV0 1343 aa24.42■■□□□ 1.5
SDCBP-209ENST00000522243 TOP1P11387 765 aaKnown RBP24.42■■□□□ 1.5
SDCBP-209ENST00000522243 SLC16A2P36021 539 aa24.42■■□□□ 1.5
SDCBP-209ENST00000522243 MSL3Q8N5Y2 521 aaKnown RBP24.42■■□□□ 1.5
SDCBP-209ENST00000522243 DCAF4Q8WV16 495 aa24.42■■□□□ 1.5
SDCBP-209ENST00000522243 UBE2OQ9C0C9 1292 aaKnown RBP24.42■■□□□ 1.5
SDCBP-209ENST00000522243 TCP11L1Q9NUJ3 509 aa24.42■■□□□ 1.5
SDCBP-209ENST00000522243 PDE4AP27815 886 aa24.41■■□□□ 1.5
SDCBP-209ENST00000522243 CNTN2Q02246 1040 aa24.41■■□□□ 1.5
SDCBP-209ENST00000522243 ZNF467Q7Z7K2 595 aaPredicted RBP24.41■■□□□ 1.5
SDCBP-209ENST00000522243 TRERF1Q96PN7 1200 aa24.41■■□□□ 1.5
SDCBP-209ENST00000522243 GPCPD1Q9NPB8 672 aa24.41■■□□□ 1.5
SDCBP-209ENST00000522243 CDKN2AIPQ9NXV6 580 aaPredicted RBP24.41■■□□□ 1.5
SDCBP-209ENST00000522243 NEDD4P46934 1319 aa24.4■■□□□ 1.5
SDCBP-209ENST00000522243 ZNF213O14771 459 aa24.4■■□□□ 1.5
SDCBP-209ENST00000522243 RNF180Q86T96 592 aa24.4■■□□□ 1.5
SDCBP-209ENST00000522243 LRCH3Q96II8 777 aa24.4■■□□□ 1.5
SDCBP-209ENST00000522243 ZKSCAN3Q9BRR0 538 aa24.4■■□□□ 1.5
SDCBP-209ENST00000522243 A1CFQ9NQ94 594 aaKnown RBP24.4■■□□□ 1.5
SDCBP-209ENST00000522243 FAM184BQ9ULE4 1060 aa24.4■■□□□ 1.5
SDCBP-209ENST00000522243 LAMA4Q16363 1823 aa24.4■■□□□ 1.5
SDCBP-209ENST00000522243 POTEB2H3BUK9 544 aa24.39■■□□□ 1.49
SDCBP-209ENST00000522243 HIP1O00291 1037 aa24.39■■□□□ 1.49
SDCBP-209ENST00000522243 ACVR2BQ13705 512 aa24.39■■□□□ 1.49
SDCBP-209ENST00000522243 TRIM60Q495X7 471 aa24.39■■□□□ 1.49
SDCBP-209ENST00000522243 MUM1L1Q5H9M0 696 aa24.39■■□□□ 1.49
SDCBP-209ENST00000522243 ARMCX2Q7L311 632 aa24.39■■□□□ 1.49
SDCBP-209ENST00000522243 RNF41Q9H4P4 317 aaPredicted RBP24.39■■□□□ 1.49
SDCBP-209ENST00000522243 PHF24Q9UPV7 400 aa24.39■■□□□ 1.49
SDCBP-209ENST00000522243 PCP11498 1178 aaKnown RBP24.38■■□□□ 1.49
SDCBP-209ENST00000522243 TKFCQ3LXA3 575 aa24.38■■□□□ 1.49
SDCBP-209ENST00000522243 CCDC144CPQ8IYA2 1237 aa24.38■■□□□ 1.49
SDCBP-209ENST00000522243 FAM133AQ8N9E0 248 aa24.38■■□□□ 1.49
SDCBP-209ENST00000522243 PRKAG2Q9UGJ0 569 aa24.38■■□□□ 1.49
SDCBP-209ENST00000522243 CCPG1Q9ULG6 757 aa24.38■■□□□ 1.49
SDCBP-209ENST00000522243 ADAMTS4O75173 837 aa24.37■■□□□ 1.49
SDCBP-209ENST00000522243 SYDE2Q5VT97 1194 aa24.37■■□□□ 1.49
SDCBP-209ENST00000522243 TDHQ8IZJ6 230 aa24.37■■□□□ 1.49
SDCBP-209ENST00000522243 ESR2Q92731 530 aa24.37■■□□□ 1.49
SDCBP-209ENST00000522243 LBHD1Q9BQE6 289 aaPredicted RBP24.37■■□□□ 1.49
SDCBP-209ENST00000522243 ABHD16BQ9H3Z7 469 aa24.37■■□□□ 1.49
SDCBP-209ENST00000522243 PRDM5Q9NQX1 630 aaPredicted RBP24.37■■□□□ 1.49
SDCBP-209ENST00000522243 SYNRGQ9UMZ2 1314 aa24.36■■□□□ 1.49
SDCBP-209ENST00000522243 SOWAHBA6NEL2 793 aa24.36■■□□□ 1.49
SDCBP-209ENST00000522243 ADCY6O43306 1168 aa24.36■■□□□ 1.49
SDCBP-209ENST00000522243 PDHBP11177 359 aa24.36■■□□□ 1.49
SDCBP-209ENST00000522243 IRX5P78411 483 aaPredicted RBP24.36■■□□□ 1.49
SDCBP-209ENST00000522243 SNX17Q15036 470 aa24.36■■□□□ 1.49
SDCBP-209ENST00000522243 BTNL9Q6UXG8 535 aa24.36■■□□□ 1.49
SDCBP-209ENST00000522243 TTC14Q96N46 770 aa24.36■■□□□ 1.49
SDCBP-209ENST00000522243 IL25Q9H293 177 aa24.36■■□□□ 1.49
SDCBP-209ENST00000522243 RANBP17Q9H2T7 1088 aaKnown RBP24.36■■□□□ 1.49
SDCBP-209ENST00000522243 DDX49Q9Y6V7 483 aaKnown RBP24.36■■□□□ 1.49
SDCBP-209ENST00000522243 LTBP2Q14767 1821 aa24.35■■□□□ 1.49
SDCBP-209ENST00000522243 A0A1W2PQ45 241 aaPredicted RBP24.35■■□□□ 1.49
SDCBP-209ENST00000522243 A0A1W2PQY0 241 aa24.35■■□□□ 1.49
SDCBP-209ENST00000522243 MYADML2A6NDP7 307 aa24.35■■□□□ 1.49
SDCBP-209ENST00000522243 ICAM1P05362 532 aa24.35■■□□□ 1.49
SDCBP-209ENST00000522243 GSPT1P15170 499 aaKnown RBP24.35■■□□□ 1.49
SDCBP-209ENST00000522243 CCDC144BQ3MJ40 725 aa24.35■■□□□ 1.49
SDCBP-209ENST00000522243 TTC22Q5TAA0 569 aa24.35■■□□□ 1.49
SDCBP-209ENST00000522243 NSMFQ6X4W1 530 aa24.35■■□□□ 1.49
SDCBP-209ENST00000522243 DSCC1Q9BVC3 393 aa24.35■■□□□ 1.49
SDCBP-209ENST00000522243 B4E1Z4 1266 aa24.34■■□□□ 1.49
SDCBP-209ENST00000522243 KDM4AO75164 1064 aa24.34■■□□□ 1.49
SDCBP-209ENST00000522243 DUSP11O75319 330 aaKnown RBP24.34■■□□□ 1.49
SDCBP-209ENST00000522243 PURBQ96QR8 312 aaKnown RBP24.34■■□□□ 1.49
SDCBP-209ENST00000522243 KATNBL1Q9H079 304 aa24.34■■□□□ 1.49
SDCBP-209ENST00000522243 LCTP09848 1927 aa24.33■■□□□ 1.49
SDCBP-209ENST00000522243 TLE2Q04725 743 aa24.33■■□□□ 1.49
SDCBP-209ENST00000522243 ZNF543Q08ER8 600 aa24.33■■□□□ 1.49
SDCBP-209ENST00000522243 SH3RF1Q7Z6J0 888 aa24.33■■□□□ 1.49
SDCBP-209ENST00000522243 KLHDC9Q8NEP7 349 aa24.33■■□□□ 1.49
SDCBP-209ENST00000522243 CYP39A1Q9NYL5 469 aa24.33■■□□□ 1.49
SDCBP-209ENST00000522243 ASTN1O14525 1302 aa24.33■■□□□ 1.48
SDCBP-209ENST00000522243 C6orf222P0C671 652 aaPredicted RBP24.32■■□□□ 1.48
SDCBP-209ENST00000522243 GOLGA8HP0CJ92 632 aa24.32■■□□□ 1.48
SDCBP-209ENST00000522243 ACLYP53396 1101 aa24.32■■□□□ 1.48
SDCBP-209ENST00000522243 KCNA10Q16322 511 aa24.32■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms