RNA–Protein interactions for RNA: ENST00000521253.1

TRIM35-203, Transcript of tripartite motif containing 35, humanhuman

TSL 1 (best) BASIC

Gene TRIM35, Length 1,215 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35-203ENST00000521253 CCND3P30281 292 aaPredicted RBP24.2■■□□□ 1.46
TRIM35-203ENST00000521253 NECTIN1Q15223 517 aa24.2■■□□□ 1.46
TRIM35-203ENST00000521253 IFIT1BQ5T764 474 aaKnown RBP24.2■■□□□ 1.46
TRIM35-203ENST00000521253 CHST13Q8NET6 341 aa24.2■■□□□ 1.46
TRIM35-203ENST00000521253 MAML3Q96JK9 1138 aa24.2■■□□□ 1.46
TRIM35-203ENST00000521253 RANBP17Q9H2T7 1088 aaKnown RBP24.2■■□□□ 1.46
TRIM35-203ENST00000521253 ZNF792Q3KQV3 632 aa24.19■■□□□ 1.46
TRIM35-203ENST00000521253 GPATCH4Q5T3I0 446 aaKnown RBP24.19■■□□□ 1.46
TRIM35-203ENST00000521253 CREB3L3Q68CJ9 461 aa24.19■■□□□ 1.46
TRIM35-203ENST00000521253 DHX30Q7L2E3 1194 aaKnown RBP eCLIP24.19■■□□□ 1.46
TRIM35-203ENST00000521253 MB21D2Q8IYB1 491 aaPredicted RBP24.19■■□□□ 1.46
TRIM35-203ENST00000521253 CRISPLD2Q9H0B8 497 aa24.19■■□□□ 1.46
TRIM35-203ENST00000521253 FBXO40Q9UH90 709 aa24.19■■□□□ 1.46
TRIM35-203ENST00000521253 TFRCP02786 760 aaKnown RBP24.18■■□□□ 1.46
TRIM35-203ENST00000521253 CHST3Q7LGC8 479 aa24.18■■□□□ 1.46
TRIM35-203ENST00000521253 RNF146Q9NTX7 359 aa24.18■■□□□ 1.46
TRIM35-203ENST00000521253 IFIT3O14879 490 aaKnown RBP24.17■■□□□ 1.46
TRIM35-203ENST00000521253 ICAM1P05362 532 aa24.17■■□□□ 1.46
TRIM35-203ENST00000521253 ALAS1P13196 640 aa24.17■■□□□ 1.46
TRIM35-203ENST00000521253 ANTXR2P58335 489 aa24.17■■□□□ 1.46
TRIM35-203ENST00000521253 ANKRD35Q8N283 1001 aa24.17■■□□□ 1.46
TRIM35-203ENST00000521253 DDX11Q96FC9 970 aa24.17■■□□□ 1.46
TRIM35-203ENST00000521253 CPVLQ9H3G5 476 aa24.17■■□□□ 1.46
TRIM35-203ENST00000521253 ACAD9Q9H845 621 aa24.17■■□□□ 1.46
TRIM35-203ENST00000521253 CCPG1Q9ULG6 757 aa24.17■■□□□ 1.46
TRIM35-203ENST00000521253 DIS3Q9Y2L1 958 aaKnown RBP24.17■■□□□ 1.46
TRIM35-203ENST00000521253 DNAJC25-GNG10A0A024R161 153 aa24.16■■□□□ 1.46
TRIM35-203ENST00000521253 CYBAP13498 195 aa24.16■■□□□ 1.46
TRIM35-203ENST00000521253 TAL1P17542 331 aaPredicted RBP24.16■■□□□ 1.46
TRIM35-203ENST00000521253 TKFCQ3LXA3 575 aa24.16■■□□□ 1.46
TRIM35-203ENST00000521253 ASPRV1Q53RT3 343 aa24.16■■□□□ 1.46
TRIM35-203ENST00000521253 UBE2Q1Q7Z7E8 422 aa24.16■■□□□ 1.46
TRIM35-203ENST00000521253 TRPV1Q8NER1 839 aa24.16■■□□□ 1.46
TRIM35-203ENST00000521253 TRERF1Q96PN7 1200 aa24.16■■□□□ 1.46
TRIM35-203ENST00000521253 UBA5Q9GZZ9 404 aa24.16■■□□□ 1.46
TRIM35-203ENST00000521253 SENP2Q9HC62 589 aa24.16■■□□□ 1.46
TRIM35-203ENST00000521253 ERICH2A1L162 156 aa24.15■■□□□ 1.46
TRIM35-203ENST00000521253 PARP1P09874 1014 aaKnown RBP24.15■■□□□ 1.46
TRIM35-203ENST00000521253 CAPN2P17655 700 aa24.15■■□□□ 1.46
TRIM35-203ENST00000521253 SART3Q15020 963 aaKnown RBP24.15■■□□□ 1.46
TRIM35-203ENST00000521253 FARP2O94887 1054 aaPredicted RBP24.14■■□□□ 1.45
TRIM35-203ENST00000521253 COL9A3Q14050 684 aaPredicted RBP24.14■■□□□ 1.45
TRIM35-203ENST00000521253 WTAPQ15007 396 aa24.14■■□□□ 1.45
TRIM35-203ENST00000521253 MUM1L1Q5H9M0 696 aa24.14■■□□□ 1.45
TRIM35-203ENST00000521253 TMEM67Q5HYA8 995 aa24.14■■□□□ 1.45
TRIM35-203ENST00000521253 LHX8Q68G74 356 aa24.14■■□□□ 1.45
TRIM35-203ENST00000521253 TINF2Q9BSI4 451 aa24.14■■□□□ 1.45
TRIM35-203ENST00000521253 A1CFQ9NQ94 594 aaKnown RBP24.14■■□□□ 1.45
TRIM35-203ENST00000521253 OGDHLQ9ULD0 1010 aa24.14■■□□□ 1.45
TRIM35-203ENST00000521253 PDE4DIPQ5VU43 2346 aa24.13■■□□□ 1.45
TRIM35-203ENST00000521253 CNGA1P29973 690 aa24.13■■□□□ 1.45
TRIM35-203ENST00000521253 PRAMEF19Q5SWL8 479 aa24.13■■□□□ 1.45
TRIM35-203ENST00000521253 IGDCC4Q8TDY8 1250 aa24.13■■□□□ 1.45
TRIM35-203ENST00000521253 PRC1O43663 620 aa24.12■■□□□ 1.45
TRIM35-203ENST00000521253 RNF20Q5VTR2 975 aa24.12■■□□□ 1.45
TRIM35-203ENST00000521253 STAG2Q8N3U4 1231 aa24.12■■□□□ 1.45
TRIM35-203ENST00000521253 ZNFX1Q9P2E3 1918 aaKnown RBP24.12■■□□□ 1.45
TRIM35-203ENST00000521253 MCM5P33992 734 aa24.11■■□□□ 1.45
TRIM35-203ENST00000521253 ADGRF4Q8IZF3 695 aa24.11■■□□□ 1.45
TRIM35-203ENST00000521253 FGD4Q96M96 766 aa24.11■■□□□ 1.45
TRIM35-203ENST00000521253 GPHNQ9NQX3 736 aaPredicted RBP24.11■■□□□ 1.45
TRIM35-203ENST00000521253 DDX20Q9UHI6 824 aaKnown RBP24.11■■□□□ 1.45
TRIM35-203ENST00000521253 WDR19Q8NEZ3 1342 aa24.1■■□□□ 1.45
TRIM35-203ENST00000521253 CNTN2Q02246 1040 aa24.1■■□□□ 1.45
TRIM35-203ENST00000521253 ZNF467Q7Z7K2 595 aaPredicted RBP24.1■■□□□ 1.45
TRIM35-203ENST00000521253 RASEFQ8IZ41 740 aa24.1■■□□□ 1.45
TRIM35-203ENST00000521253 MSL3Q8N5Y2 521 aaKnown RBP24.1■■□□□ 1.45
TRIM35-203ENST00000521253 FAM133AQ8N9E0 248 aa24.1■■□□□ 1.45
TRIM35-203ENST00000521253 ANKLE1Q8NAG6 615 aa24.1■■□□□ 1.45
TRIM35-203ENST00000521253 DIS3LQ8TF46 1054 aaKnown RBP24.1■■□□□ 1.45
TRIM35-203ENST00000521253 LY9Q9HBG7 655 aa24.1■■□□□ 1.45
TRIM35-203ENST00000521253 MAD2L2Q9UI95 211 aa24.1■■□□□ 1.45
TRIM35-203ENST00000521253 PNMA2Q9UL42 364 aa24.1■■□□□ 1.45
TRIM35-203ENST00000521253 PFASO15067 1338 aa24.1■■□□□ 1.45
TRIM35-203ENST00000521253 PALM3A6NDB9 673 aaPredicted RBP24.09■■□□□ 1.45
TRIM35-203ENST00000521253 POTEB2H3BUK9 544 aa24.09■■□□□ 1.45
TRIM35-203ENST00000521253 MSCO60682 206 aa24.09■■□□□ 1.45
TRIM35-203ENST00000521253 MNX1P50219 401 aaPredicted RBP24.09■■□□□ 1.45
TRIM35-203ENST00000521253 TROAPQ12815 778 aa24.09■■□□□ 1.45
TRIM35-203ENST00000521253 GRM4Q14833 912 aa24.09■■□□□ 1.45
TRIM35-203ENST00000521253 CDC37Q16543 378 aaPredicted RBP24.09■■□□□ 1.45
TRIM35-203ENST00000521253 MAMDC4Q6UXC1 1216 aa24.09■■□□□ 1.45
TRIM35-203ENST00000521253 NSMFQ6X4W1 530 aa24.09■■□□□ 1.45
TRIM35-203ENST00000521253 PAWRQ96IZ0 340 aaKnown RBP24.09■■□□□ 1.45
TRIM35-203ENST00000521253 MTA3Q9BTC8 594 aa24.09■■□□□ 1.45
TRIM35-203ENST00000521253 CYP39A1Q9NYL5 469 aa24.09■■□□□ 1.45
TRIM35-203ENST00000521253 NRBP1Q9UHY1 535 aa24.09■■□□□ 1.45
TRIM35-203ENST00000521253 SYNGAP1Q96PV0 1343 aa24.09■■□□□ 1.45
TRIM35-203ENST00000521253 KLRF2D3W0D1 207 aa24.08■■□□□ 1.45
TRIM35-203ENST00000521253 NFIBO00712 420 aa24.08■■□□□ 1.45
TRIM35-203ENST00000521253 SH2B2O14492 632 aaPredicted RBP24.08■■□□□ 1.45
TRIM35-203ENST00000521253 SEPT4O43236 478 aa24.08■■□□□ 1.45
TRIM35-203ENST00000521253 DHX16O60231 1041 aaKnown RBP24.08■■□□□ 1.45
TRIM35-203ENST00000521253 CATIPQ7Z7H3 387 aa24.08■■□□□ 1.45
TRIM35-203ENST00000521253 JMJD4Q9H9V9 463 aa24.08■■□□□ 1.45
TRIM35-203ENST00000521253 VAT1LQ9HCJ6 419 aa24.08■■□□□ 1.45
TRIM35-203ENST00000521253 SNAI1O95863 264 aaPredicted RBP24.07■■□□□ 1.44
TRIM35-203ENST00000521253 TSGA10IPQ3SY00 556 aa24.07■■□□□ 1.44
TRIM35-203ENST00000521253 CLEC4DQ8WXI8 215 aa24.07■■□□□ 1.44
TRIM35-203ENST00000521253 TMEM87BQ96K49 555 aa24.07■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms